Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCAATCTCTGCAACATTAGCCACCCGGAGACGGCGGACGCCTCCGATGACGGTAAACCCAAAAATCCCTATCAGATTTTATAAAATTTATCCACTTCGATTCTCTCTGTTTTTATTGTTTGAAAAATTAGAGCTCGAATTTGCAGGCTGCGCGTGGAGAAGGCGACAATGGTGGAGGAGAGAGAGAAGAGAAGTGAAGGGAGAGTTAAAAGCGTCGATTGAGAAGAAGAAAATGAAGAACGAGTACATGTCTCTGGAGGAGTTGATGTCGGCTTCTCCAGGAGCGCCGTCGGAACGAGGTTTCAACAATGGCGGGTTCAAGAGAAAAGTGCATCCGGCGAGGATTTCGCAGTGTTCTTCCGTTTGTGAGAGATCAGTCGCAGAGGATGAGTATTCTAATGGCGGGTTTTCGATAAGCGGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTAAGTTTTAGGCTGCCGGAGGTCTCGGATATTATTGTAATTCCATCGCCGGAGGATGATGTCACGGCCGATGAACAGAATGTTGCTTCCTAG
mRNA sequence
ATGGGAGCCAATCTCTGCAACATTAGCCACCCGGAGACGGCGGACGCCTCCGATGACGAGCTCGAATTTGCAGGCTGCGCGTGGAGAAGGCGACAATGGTGGAGGAGAGAGAGAAGAGAAGTGAAGGGAGAGTTAAAAGCGTCGATTGAGAAGAAGAAAATGAAGAACGAGTACATGTCTCTGGAGGAGTTGATGTCGGCTTCTCCAGGAGCGCCGTCGGAACGAGGTTTCAACAATGGCGGGTTCAAGAGAAAAGTGCATCCGGCGAGGATTTCGCAGTGTTCTTCCGTTTGTGAGAGATCAGTCGCAGAGGATGAGTATTCTAATGGCGGGTTTTCGATAAGCGGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTAAGTTTTAGGCTGCCGGAGGTCTCGGATATTATTGTAATTCCATCGCCGGAGGATGATGTCACGGCCGATGAACAGAATGTTGCTTCCTAG
Coding sequence (CDS)
ATGGGAGCCAATCTCTGCAACATTAGCCACCCGGAGACGGCGGACGCCTCCGATGACGAGCTCGAATTTGCAGGCTGCGCGTGGAGAAGGCGACAATGGTGGAGGAGAGAGAGAAGAGAAGTGAAGGGAGAGTTAAAAGCGTCGATTGAGAAGAAGAAAATGAAGAACGAGTACATGTCTCTGGAGGAGTTGATGTCGGCTTCTCCAGGAGCGCCGTCGGAACGAGGTTTCAACAATGGCGGGTTCAAGAGAAAAGTGCATCCGGCGAGGATTTCGCAGTGTTCTTCCGTTTGTGAGAGATCAGTCGCAGAGGATGAGTATTCTAATGGCGGGTTTTCGATAAGCGGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTAAGTTTTAGGCTGCCGGAGGTCTCGGATATTATTGTAATTCCATCGCCGGAGGATGATGTCACGGCCGATGAACAGAATGTTGCTTCCTAG
Protein sequence
MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMSLEELMSASPGAPSERGFNNGGFKRKVHPARISQCSSVCERSVAEDEYSNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS
Homology
BLAST of ClCG01G010110 vs. NCBI nr
Match:
XP_008458958.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo])
HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 119/175 (68.00%), Postives = 130/175 (74.29%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAG---CAWRRRQWWRRERREVKGELKASIEKKKMKNE 60
MGANLC I P TADAS D L FAG C WRRRQWWRRER EVK EL+ASIEKK+ K E
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETK-E 96
Query: 61 YMSLEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RS 120
+MSLEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ S
Sbjct: 97 FMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGES 156
Query: 121 VAEDEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
VA+DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 157 VAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210
BLAST of ClCG01G010110 vs. NCBI nr
Match:
XP_011655111.1 (uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetical protein Csa_013027 [Cucumis sativus])
HSP 1 Score: 203.0 bits (515), Expect = 1.9e-48
Identity = 116/172 (67.44%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMS 60
MGANLC I P TADAS D E C WRRR WWRRER +VK EL+ASIEKK E+MS
Sbjct: 1 MGANLCTIRCPGTADASGDGYEI--CGWRRRHWWRRERNDVKRELEASIEKK----EFMS 60
Query: 61 LEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RSVAE 120
LEEL+ ASPG PSERGF N GGFKRKVHPARI +CSS C+ +SVAE
Sbjct: 61 LEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAE 120
Query: 121 DEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
DEY S+GGF I GS+SGKLKKKVSFRLPEVSD+IVIPS EDDV ADE+NV S
Sbjct: 121 DEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166
BLAST of ClCG01G010110 vs. NCBI nr
Match:
XP_008458959.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo])
HSP 1 Score: 198.7 bits (504), Expect = 3.6e-47
Identity = 116/172 (67.44%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMS 60
MGANLC I P TADAS D E C WRRRQWWRRER EVK EL+ASIEKK+ K E+MS
Sbjct: 37 MGANLCTIRRPATADASGDGYEI--CGWRRRQWWRRERNEVKRELEASIEKKETK-EFMS 96
Query: 61 LEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RSVAE 120
LEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ SVA+
Sbjct: 97 LEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAK 156
Query: 121 DEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 157 DEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 205
BLAST of ClCG01G010110 vs. NCBI nr
Match:
TYK12357.1 (uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa])
HSP 1 Score: 198.7 bits (504), Expect = 3.6e-47
Identity = 116/172 (67.44%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMS 60
MGANLC I P TADAS D E C WRRRQWWRRER EVK EL+ASIEKK+ K E+MS
Sbjct: 1 MGANLCTIRRPATADASGDGYEI--CGWRRRQWWRRERNEVKRELEASIEKKETK-EFMS 60
Query: 61 LEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RSVAE 120
LEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ SVA+
Sbjct: 61 LEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAK 120
Query: 121 DEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 121 DEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 169
BLAST of ClCG01G010110 vs. NCBI nr
Match:
KAA0054321.1 (uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 198.4 bits (503), Expect = 4.7e-47
Identity = 119/178 (66.85%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDD---ELEFAG---CAWRRRQWWRRERREVKGELKASIEKKKM 60
MGANLC I P TADAS D L FAG C WRRRQWWRRER EVK EL+ASIEKK+
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 KNEYMSLEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE------ 120
K E+MSLEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+
Sbjct: 61 K-EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFV 120
Query: 121 -RSVAEDEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
SVA+DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 121 GESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 177
BLAST of ClCG01G010110 vs. ExPASy TrEMBL
Match:
A0A0A0LT52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 119/175 (68.00%), Postives = 130/175 (74.29%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAG---CAWRRRQWWRRERREVKGELKASIEKKKMKNE 60
MGANLC I P TADAS D L FAG C WRRR WWRRER +VK EL+ASIEKK E
Sbjct: 1 MGANLCTIRCPGTADASGDGLGFAGYEICGWRRRHWWRRERNDVKRELEASIEKK----E 60
Query: 61 YMSLEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RS 120
+MSLEEL+ ASPG PSERGF N GGFKRKVHPARI +CSS C+ +S
Sbjct: 61 FMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKS 120
Query: 121 VAEDEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
VAEDEY S+GGF I GS+SGKLKKKVSFRLPEVSD+IVIPS EDDV ADE+NV S
Sbjct: 121 VAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 171
BLAST of ClCG01G010110 vs. ExPASy TrEMBL
Match:
A0A1S3C9M5 (uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49
Identity = 119/175 (68.00%), Postives = 130/175 (74.29%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAG---CAWRRRQWWRRERREVKGELKASIEKKKMKNE 60
MGANLC I P TADAS D L FAG C WRRRQWWRRER EVK EL+ASIEKK+ K E
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETK-E 96
Query: 61 YMSLEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RS 120
+MSLEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ S
Sbjct: 97 FMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGES 156
Query: 121 VAEDEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
VA+DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 157 VAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210
BLAST of ClCG01G010110 vs. ExPASy TrEMBL
Match:
A0A5D3CKA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001340 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 116/172 (67.44%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMS 60
MGANLC I P TADAS D E C WRRRQWWRRER EVK EL+ASIEKK+ K E+MS
Sbjct: 1 MGANLCTIRRPATADASGDGYEI--CGWRRRQWWRRERNEVKRELEASIEKKETK-EFMS 60
Query: 61 LEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RSVAE 120
LEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ SVA+
Sbjct: 61 LEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAK 120
Query: 121 DEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 121 DEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 169
BLAST of ClCG01G010110 vs. ExPASy TrEMBL
Match:
A0A1S3CAA9 (uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 116/172 (67.44%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDDELEFAGCAWRRRQWWRRERREVKGELKASIEKKKMKNEYMS 60
MGANLC I P TADAS D E C WRRRQWWRRER EVK EL+ASIEKK+ K E+MS
Sbjct: 37 MGANLCTIRRPATADASGDGYEI--CGWRRRQWWRRERNEVKRELEASIEKKETK-EFMS 96
Query: 61 LEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE-------RSVAE 120
LEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+ SVA+
Sbjct: 97 LEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAK 156
Query: 121 DEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 157 DEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 205
BLAST of ClCG01G010110 vs. ExPASy TrEMBL
Match:
A0A5A7ULA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00430 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.3e-47
Identity = 119/178 (66.85%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 1 MGANLCNISHPETADASDD---ELEFAG---CAWRRRQWWRRERREVKGELKASIEKKKM 60
MGANLC I P TADAS D L FAG C WRRRQWWRRER EVK EL+ASIEKK+
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 KNEYMSLEELMSASPGAPSERGFNN---------GGFKRKVHPARISQCSSVCE------ 120
K E+MSLEEL+ ASPGAPSERG N GGFKRKVHPARI + SSVC+
Sbjct: 61 K-EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFV 120
Query: 121 -RSVAEDEY-SNGGFSISGSESGKLKKKVSFRLPEVSDIIVIPSPEDDVTADEQNVAS 156
SVA+DEY S+ GF I ESGKLKKKVSFRLPEVSD+IVIPS EDDVTAD++NV S
Sbjct: 121 GESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 177
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008458958.1 | 1.1e-48 | 68.00 | PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo] | [more] |
| XP_011655111.1 | 1.9e-48 | 67.44 | uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetica... | [more] |
| XP_008458959.1 | 3.6e-47 | 67.44 | PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo] | [more] |
| TYK12357.1 | 3.6e-47 | 67.44 | uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa] | [more] |
| KAA0054321.1 | 4.7e-47 | 66.85 | uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LT52 | 2.8e-50 | 68.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1 | [more] |
| A0A1S3C9M5 | 5.4e-49 | 68.00 | uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A5D3CKA0 | 1.7e-47 | 67.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3CAA9 | 1.7e-47 | 67.44 | uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A5A7ULA6 | 2.3e-47 | 66.85 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
