ClCG01G009890 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G009890
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUlp1-like peptidase
LocationCG_Chr01: 14224168 .. 14225658 (-)
RNA-Seq ExpressionClCG01G009890
SyntenyClCG01G009890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTTGAGGTGAACAAAGGACTGGGACGAAATACAGAATGCTCAAAAACTTTCTTTCTCGAGGCATGCCTGGGTCCTTTTAGCCCTGAGTTGCATTATGACATATCAATCTCAGGCCTCGATCTCGCCCAAGATTGTACTGAGATTGGAAGCAATTTTCTTAGTTTTTTTTAAGTTTTTGTCATGGTCGTTTTGTTGTTTTGGTGCTAAGTGTAGCCATTGTCTTCTCTTTTGTTTTCTAGATGGCGTTGGTACCTAAAATTCGCACTTCTAATTTTTTCTAGCTAATCTGACTTGTTGTTCCCATCTGGGGAAAACAATTGCAAACATTAAGAAGAAGCTAATGTCTAGACAGTTATATATGTTCAGGCAAACCTGTTTTGGTCATTTTTTGGATCTTAAGTTAGTTTTTAATTGGCTTATGTGCCACTATATTCTTTTGAGGGAGGCCAAGGAAAGCAGGGAAGAAGACACTATTAGTTAAATTACTAGGGAAGAAAGTGTCGTTTGGGTGAGAACATTTTGATCTTGTCACGGGTTTGAGATACAGTTGTAGGGGGGTGGTTGAGGCTGATCCCCATAGACTACATAGGCTGAGGCAGTTGCACTTGGCTGATAAACTTGGCATGTGATGGACTGAGTTGGACAATTTGTTCCTTAACTATGAGTTCGAGAGTGACGAGGATGCAGTTAAGATGGCTATATTCTACTTCCTCGAGCTCGCTATGATGGGGAGGGAGAGGAGACAACACATGGATTGGATGATGTTGGATTTTATTGACATATGGGAGGACTTCTGTAGTTGCGACTGGAGCCAACATGGTGTTTCAAAAGATGTTGGCTAGCTTATAGGGTGCATTTCGAGGGAATGTTGCACTCTACGAGAAGAAGCCTTCTAATAGTAAATCACCCAAGTAGTACAATTTATACAACTTCTTGTTTGCATTCCAGGTTTGTTTATTTAAATTCATATGTGTTTCCTCATGTTTACCTCTAATTTAATCACTTCTAATACCTCTAATTTAATTAACTTCTAATACATTTGTTGTTTGTTTTGCTAGGTATGAGTGTATGAGACTATCGCATAGCTCAACGCATAGGTTACGTCTCGGATCACCAATGATGTGATCCCACACATCTGTATATGGACTTTCATGTACTCACTTGGAGCGAAGGTTATTTAGACCCAAGTGTTTAGGTCTCAAGTGGTAAGCCTTCGTTTACATTGTTACGTTATGGTAGTATTTTTAAATAGTAATTATTATATTTTCATAATTGTTGCATGCAAGCTGGGATACTAGATATTGCTCCTATGATGCTGAGTAGGACTATTTGGCCCGGTATTTGGACCCTCCGTGCAAAAATGGATACCAAAAACCCCCTCTTGTTGAAGCACTTGTTGCATCATTGACCGGCAAGGGTGTTGAAGGGGGCGATGTGAAGGAATTGAATCCTCAGAGGAAGCGAATGAATGCCTTGTGCCAATAA

mRNA sequence

ATGCCATTTGAGGTGAACAAAGGACTGGGACGAAATACAGAATGCTCAAAAACTTTCTTTCTCGAGGCATGCCTGGGTCCTTTTAGCCCTGAGTTGCATTATGACATATCAATCTCAGGCCTCGATCTCGCCCAAGATTGGAGGCCAAGGAAAGCAGGGAAGAAGACACTATTAGTTAAATTACTAGGGAAGAAAGTGTCGTTTGGGGGGGTGGTTGAGGCTGATCCCCATAGACTACATAGGCTGAGGCAGTTGCACTTGGCTGATAAACTTGGCATTGACGAGGATGCAGTTAAGATGGCTATATTCTACTTCCTCGAGCTCGCTATGATGGGGAGGGAGAGGAGACAACACATGGATTGGATGATGTTGGATTTTATTGACATATGGGAGGACTTCTGTAGTTGCGACTGGAGCCAACATGGTGTTTCAAAAGATGTTACGTCTCGGATCACCAATGATGTGATCCCACACATCTGTATATGGACTTTCATGTACTCACTTGGAGCGAAGGACTATTTGGCCCGGTATTTGGACCCTCCGTGCAAAAATGGATACCAAAAACCCCCTCTTGTTGAAGCACTTGTTGCATCATTGACCGGCAAGGGTGTTGAAGGGGGCGATGTGAAGGAATTGAATCCTCAGAGGAAGCGAATGAATGCCTTGTGCCAATAA

Coding sequence (CDS)

ATGCCATTTGAGGTGAACAAAGGACTGGGACGAAATACAGAATGCTCAAAAACTTTCTTTCTCGAGGCATGCCTGGGTCCTTTTAGCCCTGAGTTGCATTATGACATATCAATCTCAGGCCTCGATCTCGCCCAAGATTGGAGGCCAAGGAAAGCAGGGAAGAAGACACTATTAGTTAAATTACTAGGGAAGAAAGTGTCGTTTGGGGGGGTGGTTGAGGCTGATCCCCATAGACTACATAGGCTGAGGCAGTTGCACTTGGCTGATAAACTTGGCATTGACGAGGATGCAGTTAAGATGGCTATATTCTACTTCCTCGAGCTCGCTATGATGGGGAGGGAGAGGAGACAACACATGGATTGGATGATGTTGGATTTTATTGACATATGGGAGGACTTCTGTAGTTGCGACTGGAGCCAACATGGTGTTTCAAAAGATGTTACGTCTCGGATCACCAATGATGTGATCCCACACATCTGTATATGGACTTTCATGTACTCACTTGGAGCGAAGGACTATTTGGCCCGGTATTTGGACCCTCCGTGCAAAAATGGATACCAAAAACCCCCTCTTGTTGAAGCACTTGTTGCATCATTGACCGGCAAGGGTGTTGAAGGGGGCGATGTGAAGGAATTGAATCCTCAGAGGAAGCGAATGAATGCCTTGTGCCAATAA

Protein sequence

MPFEVNKGLGRNTECSKTFFLEACLGPFSPELHYDISISGLDLAQDWRPRKAGKKTLLVKLLGKKVSFGGVVEADPHRLHRLRQLHLADKLGIDEDAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVTSRITNDVIPHICIWTFMYSLGAKDYLARYLDPPCKNGYQKPPLVEALVASLTGKGVEGGDVKELNPQRKRMNALCQ
Homology
BLAST of ClCG01G009890 vs. NCBI nr
Match: KGN57895.1 (hypothetical protein Csa_010434 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-10
Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 81  RLRQLHLADKLGI----------------DEDAVKMAIFYFLELAMMGRERRQHMDWMML 140
           RLRQL+L D+  +                DED VK+++FYF+ELAM+GRERRQHMDW ML
Sbjct: 15  RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTML 74

BLAST of ClCG01G009890 vs. NCBI nr
Match: XP_022155158.1 (uncharacterized protein LOC111022300 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-10
Identity = 58/184 (31.52%), Postives = 83/184 (45.11%), Query Frame = 0

Query: 10  GRNTECSKTFFLEACLGPFSPELHYDISISG-----LDLAQDWRPRKAGKKTLLVKLLGK 69
           GR T      F + C GP    L  D+  +G     L L +   PR   +  +   L GK
Sbjct: 32  GRLTPTQIDMFRQTCFGPI---LDMDVVFNGPLIHHLLLREVEEPR---QDIISFDLFGK 91

Query: 70  KVSFG----GVVEADPHRL---------HRLRQLHLADKLGI----------------DE 129
           +VSFG     ++    +R+          RLR  +  D + +                DE
Sbjct: 92  RVSFGKREFDLITGLSYRMIRVDNDIPGRRLRARYFKDSVRVKCSELEKIFMETVFYDDE 151

Query: 130 DAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVTS--RITN 158
           DAVK+ I YF+ELAMMG+ER+Q +D  +L  +D WE FC+ DWS     + + S     N
Sbjct: 152 DAVKVGIVYFVELAMMGKERKQFIDATLLGVVDRWELFCNHDWSSLIFERTLWSLKNAVN 209

BLAST of ClCG01G009890 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-10
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = 0

Query: 11  RNTECSKTFFLEACLGPFSPELHYDISISG-----LDLAQDWRPRKAGKKTLLVKLLGKK 70
           R T      F + C GP    L  D+  +G     L L +   PR   +  +   L GK+
Sbjct: 33  RLTPTQLDMFRQTCFGPI---LDIDVVFNGPLIHHLLLREVEEPR---QDVISFDLFGKR 92

Query: 71  VSFG----GVVEADPHRLHR-------------------------LRQLHLADKLGIDED 130
           VSFG     ++    HR++R                         L ++ L D    DED
Sbjct: 93  VSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDGVRVKCSELEKIFLEDVFYDDED 152

Query: 131 AVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWS 140
            VK+ I YF+ELAMMG+ER+Q +D  +L  +D WE FC+ DWS
Sbjct: 153 VVKVRIVYFIELAMMGKERKQFIDTALLGVVDRWEVFCNYDWS 189

BLAST of ClCG01G009890 vs. NCBI nr
Match: XP_038904324.1 (uncharacterized protein LOC120090678 [Benincasa hispida])

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-09
Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0

Query: 60  KLLGKKVSFG---------------GVVEADPHRLHRLRQLHLADKLGI----------- 119
           KLLGKKVSFG                VVE D     +L +L+  +++ +           
Sbjct: 31  KLLGKKVSFGREEFDIVTNLRYRPRHVVEFDEDIALKLGKLYFGNRINMNGVELDKDFSD 90

Query: 120 -----DEDAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVT 150
                DED VK+ + YF+EL MM  +R QHMD  ML  ID+WEDFCS D      +K ++
Sbjct: 91  FEFKSDEDVVKLVVSYFIELEMMRMKRSQHMDLTMLGMIDVWEDFCSYDQGNMIFTKTLS 150

BLAST of ClCG01G009890 vs. NCBI nr
Match: KAA0042171.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26746.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-09
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 94  DEDAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVTSRIT 153
           DED VKM++FYF+EL MMGRE+RQHMDW +L  ID  E+F S DW   G+S  + S I+
Sbjct: 18  DEDVVKMSLFYFIELVMMGREKRQHMDWTILSLIDDVENFMSYDW---GLSIQIMSSIS 73

BLAST of ClCG01G009890 vs. ExPASy TrEMBL
Match: A0A0A0L7D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-10
Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 81  RLRQLHLADKLGI----------------DEDAVKMAIFYFLELAMMGRERRQHMDWMML 140
           RLRQL+L D+  +                DED VK+++FYF+ELAM+GRERRQHMDW ML
Sbjct: 15  RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTML 74

BLAST of ClCG01G009890 vs. ExPASy TrEMBL
Match: A0A6J1DM82 (uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022300 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-10
Identity = 58/184 (31.52%), Postives = 83/184 (45.11%), Query Frame = 0

Query: 10  GRNTECSKTFFLEACLGPFSPELHYDISISG-----LDLAQDWRPRKAGKKTLLVKLLGK 69
           GR T      F + C GP    L  D+  +G     L L +   PR   +  +   L GK
Sbjct: 32  GRLTPTQIDMFRQTCFGPI---LDMDVVFNGPLIHHLLLREVEEPR---QDIISFDLFGK 91

Query: 70  KVSFG----GVVEADPHRL---------HRLRQLHLADKLGI----------------DE 129
           +VSFG     ++    +R+          RLR  +  D + +                DE
Sbjct: 92  RVSFGKREFDLITGLSYRMIRVDNDIPGRRLRARYFKDSVRVKCSELEKIFMETVFYDDE 151

Query: 130 DAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVTS--RITN 158
           DAVK+ I YF+ELAMMG+ER+Q +D  +L  +D WE FC+ DWS     + + S     N
Sbjct: 152 DAVKVGIVYFVELAMMGKERKQFIDATLLGVVDRWELFCNHDWSSLIFERTLWSLKNAVN 209

BLAST of ClCG01G009890 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-10
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = 0

Query: 11  RNTECSKTFFLEACLGPFSPELHYDISISG-----LDLAQDWRPRKAGKKTLLVKLLGKK 70
           R T      F + C GP    L  D+  +G     L L +   PR   +  +   L GK+
Sbjct: 33  RLTPTQLDMFRQTCFGPI---LDIDVVFNGPLIHHLLLREVEEPR---QDVISFDLFGKR 92

Query: 71  VSFG----GVVEADPHRLHR-------------------------LRQLHLADKLGIDED 130
           VSFG     ++    HR++R                         L ++ L D    DED
Sbjct: 93  VSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDGVRVKCSELEKIFLEDVFYDDED 152

Query: 131 AVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWS 140
            VK+ I YF+ELAMMG+ER+Q +D  +L  +D WE FC+ DWS
Sbjct: 153 VVKVRIVYFIELAMMGKERKQFIDTALLGVVDRWEVFCNYDWS 189

BLAST of ClCG01G009890 vs. ExPASy TrEMBL
Match: A0A5D3DSQ8 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00330 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.7e-09
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 94  DEDAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWSQHGVSKDVTSRIT 153
           DED VKM++FYF+EL MMGRE+RQHMDW +L  ID  E+F S DW   G+S  + S I+
Sbjct: 18  DEDVVKMSLFYFIELVMMGREKRQHMDWTILSLIDDVENFMSYDW---GLSIQIMSSIS 73

BLAST of ClCG01G009890 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.7e-09
Identity = 56/167 (33.53%), Postives = 72/167 (43.11%), Query Frame = 0

Query: 11  RNTECSKTFFLEACLGPF--------SPELHYDISISGLDLAQDWRPRKAGKKTLLVKLL 70
           R T      F + C GP          P LH+      L L +   P+      +   L 
Sbjct: 33  RLTPSQLDMFSQTCFGPILGMNVVFNGPLLHH------LLLREVEEPK---DDLISFNLF 92

Query: 71  GKKVSFG--------------GVVEADPHRLHRLRQLHLADKLGI--------------- 130
           G +VSFG                V+ D  R  RLR L+  DK  +               
Sbjct: 93  GNRVSFGKREFDLITGLRHTMNRVDEDV-RNRRLRILYFQDKASVKCSELEKIFLEHTFE 152

Query: 131 -DEDAVKMAIFYFLELAMMGRERRQHMDWMMLDFIDIWEDFCSCDWS 140
            DEDAVK+AI YF+ELAMMG+ER+  MD  +L  +D WE FC+ DWS
Sbjct: 153 NDEDAVKIAIVYFIELAMMGKERKLKMDTSLLGIVDRWEVFCNYDWS 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57895.13.0e-1051.32hypothetical protein Csa_010434 [Cucumis sativus][more]
XP_022155158.13.9e-1031.52uncharacterized protein LOC111022300 [Momordica charantia][more]
XP_022153201.15.0e-1032.52uncharacterized protein LOC111020757 [Momordica charantia][more]
XP_038904324.14.3e-0937.19uncharacterized protein LOC120090678 [Benincasa hispida][more]
KAA0042171.15.6e-0957.63Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26746.1 Ulp1-like peptidase [... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7D51.4e-1051.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1[more]
A0A6J1DM821.9e-1031.52uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DJX92.4e-1032.52uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A5D3DSQ82.7e-0957.63Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G... [more]
A0A6J1DRZ72.7e-0933.53uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G009890.1ClCG01G009890.1mRNA