ClCG01G009210 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAATGGATAATTTTCATGTCACACCTTTCAAATGTTGTGGCACACCAAGATGTTATATATATCTCTTCTCCATTTCCATCTTTATACACATCTTAATTGGCTTCAATCAAAATAGCCTCAAAATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGGTAAGTATAACAATATATTTTATTTTTAAAAATGTTTTAAAAAATAGAAAAATAGTTTAAAATAATTACAAATATAGTAAAATTTTAGTTTCTATTGGTGATAGACCGCGCTAGACCCAAATAGACACCTATCAATAGATACAAATAGATGTCTATTTAGATCTATCGGTTTTTATCACAAATAGAAAGTAAAATTTTGTTATATGTATAAATAGTTTGATATTTTTTTATGTTATAATAATTTTCTTTATTTTTACTTTATTTACTTATTAATTACGTTGAATGCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGGTATAATCTTAACCCCATATTTTCTTTGTTGCAAACCGAAATGATTACTAATTTCAAACCATATAAAAACCTTTGGCAGTATTAAATTATTAATAATATATGTTTAGGTTTGACTATGAATGAGCTTAATATTTTCTAAAAGACGTTGGGTATGGTTTTGAAGAAAAGTTGTATCCCTGTTCTTAATTAGAATTTTTTATTTTGCGTCGAGTTTTGATTTGATCCCTATGTTTTAAAATATTAATATTTAATTCTTAAGTTTTGAGTTTGGTGCCAATTTAGCCCTTTAATTTCAAAATATTACAATTTTAACTTTCAGATTTGAGTTTTCTTTCAATTTAGTGGTCTTTAAGTTCCAATATCTACCATAATTTTAACCTCATATTTCATATCCAGTAATTGGCATCAATGTTGATTAATTAACTTTAAATAATTATAAAGTGGAATTTTAAATTCAATTTTAACAATAATGGAAATATAGTGAAACTTAATTAATTATAGTTATTATAATTATTTTAAATTAATTAATGGAAAGTTATTTTAAATTACAAATAATTGTAAAATATCAGTCTATTTGCGATATACCATGATAGATTGCGAGAGATTAGCATATGTGAATATCATGATAGACTGCAATAGACTACTATCTGTGCCTATCATGATAGACACAAATAGTACTCTATTGCGGTCTATTACAGACAGACAGCAAAAAAATTTTATATTTACAAATATTTTAATTCATTTTATTATATTAGAAACAAGCCTTAATCAATGGACATTAAAACAAATATAGAAAACTGAATATTTAGTGAAAAATCAAGGTTAAAAGTGTAAATCTTGAAACTTAGGAATCAAATTGAAAGAAAACTCAAATCTAAAGGGTAAATTTGAAACATTTTGAAACTTGGGGACTTCATTGAAATTAAACTAAAAACTTAAGTACTAAATATGTAAGATTAGAAAAGAGGGACCAAATAAAAACTAGAACCTAAACCTAAGGTCGAAAAAGATAGTTTTCCCACTCTGGTGTTGTAACTAATTTGAAGTTAACTCAAGTAGTTAAAACGTTATATTGGCAACGATCTCACAATGATGTCTAAAAACGTGCAGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAG ATGAGAATGGATAATTTTCATGTCACACCTTTCAAATGTTGTGGCACACCAAGATGTTATATATATCTCTTCTCCATTTCCATCTTTATACACATCTTAATTGGCTTCAATCAAAATAGCCTCAAAATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAG ATGAGAATGGATAATTTTCATGTCACACCTTTCAAATGTTGTGGCACACCAAGATGTTATATATATCTCTTCTCCATTTCCATCTTTATACACATCTTAATTGGCTTCAATCAAAATAGCCTCAAAATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAG MRMDNFHVTPFKCCGTPRCYIYLFSISIFIHILIGFNQNSLKMSSEENEARKILLGHCLGNILPQSDVPIKLPSLVPLFDQLLDGIPLNNGAQKFYLNKETNSNRVFIPVKSLTIYGIDDPRYWILSCLEEWGKKVTIAEVRGISQFDISGSVKTGLLTPKVIYIVVFVVLLTIDAKGWTSPVNLILKKPNGSKIESKISLEGKPRGEYFEVIVGELTLDDRGCADTSVIEFGMYEHGSQLKSGLVLKGGLLRSKASPGCPHADTK Homology
BLAST of ClCG01G009210 vs. NCBI nr
Match: WP_219729244.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE05059.1 hypothetical protein BV921_23310, partial [Pectobacterium odoriferum]) HSP 1 Score: 292.7 bits (748), Expect = 3.1e-75 Identity = 143/234 (61.11%), Postives = 172/234 (73.50%), Query Frame = 0
BLAST of ClCG01G009210 vs. NCBI nr
Match: XP_038893562.1 (lectin-like [Benincasa hispida]) HSP 1 Score: 235.7 bits (600), Expect = 4.5e-58 Identity = 117/225 (52.00%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of ClCG01G009210 vs. NCBI nr
Match: WP_181002512.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE16080.1 hypothetical protein BV923_23560, partial [Pectobacterium odoriferum]) HSP 1 Score: 226.5 bits (576), Expect = 2.7e-55 Identity = 105/174 (60.34%), Postives = 131/174 (75.29%), Query Frame = 0
BLAST of ClCG01G009210 vs. NCBI nr
Match: AAA92465.1 (phloem protein 2 [Cucurbita argyrosperma]) HSP 1 Score: 185.7 bits (470), Expect = 5.4e-43 Identity = 98/223 (43.95%), Postives = 138/223 (61.88%), Query Frame = 0
BLAST of ClCG01G009210 vs. NCBI nr
Match: KAG6583769.1 (hypothetical protein SDJN03_19701, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 7.0e-43 Identity = 97/223 (43.50%), Postives = 138/223 (61.88%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 71/206 (34.47%), Postives = 120/206 (58.25%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21 Identity = 76/198 (38.38%), Postives = 101/198 (51.01%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13 Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy Swiss-Prot
Match: Q9C5Q9 (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana OX=3702 GN=PP2A5 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11 Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy Swiss-Prot
Match: O81866 (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy TrEMBL
Match: Q39461 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43 Identity = 98/223 (43.95%), Postives = 138/223 (61.88%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy TrEMBL
Match: A0A6J1EHQ4 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434188 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41 Identity = 96/225 (42.67%), Postives = 139/225 (61.78%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy TrEMBL
Match: Q8LK67 (Phloem lectin OS=Cucurbita argyrosperma subsp. sororia OX=37648 GN=PP2 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.4e-41 Identity = 94/223 (42.15%), Postives = 136/223 (60.99%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy TrEMBL
Match: Q9LLT3 (Phloem protein 2 OS=Cucurbita moschata OX=3662 GN=pp2 PE=2 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 9.2e-41 Identity = 94/223 (42.15%), Postives = 136/223 (60.99%), Query Frame = 0
BLAST of ClCG01G009210 vs. ExPASy TrEMBL
Match: Q39462 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40 Identity = 95/223 (42.60%), Postives = 135/223 (60.54%), Query Frame = 0
BLAST of ClCG01G009210 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 ) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22 Identity = 76/198 (38.38%), Postives = 101/198 (51.01%), Query Frame = 0
BLAST of ClCG01G009210 vs. TAIR 10
Match: AT1G65390.1 (phloem protein 2 A5 ) HSP 1 Score: 68.9 bits (167), Expect = 6.8e-12 Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 0
BLAST of ClCG01G009210 vs. TAIR 10
Match: AT4G19850.1 (lectin-related ) HSP 1 Score: 65.1 bits (157), Expect = 9.8e-11 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
BLAST of ClCG01G009210 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 ) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07 Identity = 48/154 (31.17%), Postives = 65/154 (42.21%), Query Frame = 0
BLAST of ClCG01G009210 vs. TAIR 10
Match: AT4G19850.2 (lectin-related ) HSP 1 Score: 50.8 bits (120), Expect = 1.9e-06 Identity = 32/101 (31.68%), Postives = 51/101 (50.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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