Homology
BLAST of ClCG01G008850 vs. NCBI nr
Match:
XP_038894404.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 1646.7 bits (4263), Expect = 0.0e+00
Identity = 830/952 (87.18%), Postives = 868/952 (91.18%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMANVNLCIP+CERNGFPALHCTQN HNFFGFSFFPSS+SG DLN GD K+RVLRH
Sbjct: 1 MVGVIMANVNLCIPSCERNGFPALHCTQNSHNFFGFSFFPSSVSGPDLNFGDAKHRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
R HKCG+IKASSNGESDIRLPS NLLENDF FKPSFDEYVRVMETVRTRRYK+QSDD NK
Sbjct: 61 RVHKCGSIKASSNGESDIRLPSENLLENDFQFKPSFDEYVRVMETVRTRRYKRQSDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
LTMKENAS KSAE TSISKIDNGKNK TDVQ +VDVKNMFKRVDRKDLFNNTERITR RD
Sbjct: 121 LTMKENASVKSAEITSISKIDNGKNKVTDVQGNVDVKNMFKRVDRKDLFNNTERITRERD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNK DSKRKG++RSNDEVKGKVTPF SQ +DKQHE+KRN N S+ EPKVPR YNEK
Sbjct: 181 LSGNKIDSKRKGISRSNDEVKGKVTPFDSQVNDKQHEEKRNINRSNYTEPKVPRLYNEKR 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
INFKANTLD+KRE+ R + S M+IS KIW +DDTKPAKDIL A K+ VQLERNYI G+K
Sbjct: 241 INFKANTLDIKRESHRASNGSSMRISGKIWANDDTKPAKDILNAVKYSVQLERNYISGDK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
VGRKK EQSYR SKSGK+FLEF ++SSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ
Sbjct: 301 VGRKKTEQSYRESSKSGKRFLEFTEDSSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
ML KRLNG++IDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR
Sbjct: 361 MLCKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALN+FHAMQQHF+SYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNLFHAMQQHFTSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
M+ELFDVIDSMR PPKKKFKTG LEKWDPRL+PDIVIYNAVLNACVKRKNLEGAFWVLQE
Sbjct: 481 MKELFDVIDSMRSPPKKKFKTGVLEKWDPRLEPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LKKQGLQPSTSTYGLVM EVMLECGKY
Sbjct: 541 LKKQGLQPSTSTYGLVM----------------------------------EVMLECGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGRCKEALMQMEKICKVA KPLVVTYTGLIQACLDSKD++SAVYIFNHMKTFCSP
Sbjct: 661 RCLCSAGRCKEALMQMEKICKVATKPLVVTYTGLIQACLDSKDIRSAVYIFNHMKTFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVTYN++LKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF
Sbjct: 721 NLVTYNMLLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
AEKRWDDFGYF++QMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHL+QADR PPP
Sbjct: 781 AEKRWDDFGYFYDQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLAQADRTPPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
LLKERFCMKLARGDYS+ALSCISNH+SSD HHFSE WLNLLKEKRFPKDTVIQLI KVS
Sbjct: 841 LLKERFCMKLARGDYSEALSCISNHDSSDVHHFSESGWLNLLKEKRFPKDTVIQLINKVS 900
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLLTRND PNPVF+NLLLSCKEFCRTR SVADHRLEETVCTNETQSAAV+ I
Sbjct: 901 MLLTRNDLPNPVFKNLLLSCKEFCRTRISVADHRLEETVCTNETQSAAVVRI 918
BLAST of ClCG01G008850 vs. NCBI nr
Match:
XP_031741862.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >XP_031741863.1 pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sativus] >KGN65965.1 hypothetical protein Csa_023210 [Cucumis sativus])
HSP 1 Score: 1567.4 bits (4057), Expect = 0.0e+00
Identity = 792/941 (84.17%), Postives = 841/941 (89.37%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN+NLCIPNCER GFP LHCT N HN F SFFPSS+SGTD ++ D KNRVLRH
Sbjct: 1 MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
R HKCG+IKA SNGESDI LPSGNLLE+DF FKPSFDEYV+VMETVRTRRYK+Q DD NK
Sbjct: 61 RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
LTMKEN SAKSAESTSISKIDNGKNK TDVQ +VDVKNMFKRVD+KDLFNNTERI +D
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNKFD +RK VTRSND+VKGK+TPF S +DKQHE+KRN NWSS IEP+V RS ++K
Sbjct: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKI--WDDDDTKPAKDILKAGKFGVQLERNYIPG 300
I+FKANTL+VK+E+ RV D + MK SEKI W DDD KPAK +LKAGK+G+QLER+Y PG
Sbjct: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
Query: 301 EKVGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEER 360
+KVGRKK EQSYRG S SGK+FLEF +++SLEVEHAAFNNFDA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
Query: 361 IQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQ 420
IQMLSKRLNG++IDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480
MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
Query: 481 GYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
GYMRELFDVIDSMR PPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
Query: 541 QELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECG 600
QELKKQ LQPSTSTYGLVM EVMLECG
Sbjct: 541 QELKKQSLQPSTSTYGLVM----------------------------------EVMLECG 600
Query: 601 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYD 660
KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME RGIVGSAALYYD
Sbjct: 601 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYD 660
Query: 661 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFC 720
FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK FC
Sbjct: 661 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFC 720
Query: 721 SPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDA 780
SPNLVTYNI+LKGYLEHGMFEEARELFQNLSE RNISTVSDYRDRVLPDIYMFNTMLDA
Sbjct: 721 SPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDA 780
Query: 781 SFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPP 840
SFAEKRWDDF YF+NQM LYGYHFNPKRHLRMILEAAR GKDELLETTWKHL+QADR PP
Sbjct: 781 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPP 840
Query: 841 PALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYK 900
P LLKERFCMKLARGDYS+ALS I +HNS DAHHFSE AWLNLLKEKRFP+DTVI+LI+K
Sbjct: 841 PPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHK 900
Query: 901 VSMLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETV 940
V M+LTRN+SPNPVF+NLLLSCKEFCRTR S+ADHRLEETV
Sbjct: 901 VGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETV 906
BLAST of ClCG01G008850 vs. NCBI nr
Match:
XP_008459122.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis melo])
HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 788/947 (83.21%), Postives = 834/947 (88.07%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSIS--GTDLNIGDVKNRVL 60
MVGVIMANVNL IPNCER GFP LHCT N H F SFFPSS+S GTDLN D KNRVL
Sbjct: 1 MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60
Query: 61 RHRGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDL 120
RHR HKCG+IKA SNGESDI LP+GNLLE+DF FKPSFDEYV+VMETVRTRRYK+Q D
Sbjct: 61 RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120
Query: 121 NKLTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRR 180
NKLTMKEN SAKSAESTSISKIDNGKNK TDVQ +V+VKNMFKRVD+KDLFNNTERI R
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180
Query: 181 RDLSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNE 240
+ LSGNKFD + KGVTRSND+VKGK+TPF S +DKQHE+K+N NWSS IEPKV RS E
Sbjct: 181 KHLSGNKFD-RSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCE 240
Query: 241 KLINFKANTLDVKRENRRVCDQSPMKISEKI--WDDDDTKPAKDILKAGKFGVQLERNYI 300
K I+FKAN L+ K+E RV + MK SEKI W +DD KPAKD+LKAGK+G+QLER+Y
Sbjct: 241 KPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYS 300
Query: 301 PGEKVGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
PG+KVGRKK EQSYRG S SGK+FLEF +E+SLEVEHAAFNNFDALDIMDKPRVSKMEME
Sbjct: 301 PGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
Query: 361 ERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
ERIQMLSKRLNG++IDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW
Sbjct: 361 ERIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
Query: 421 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 480
LQMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLG
Sbjct: 421 LQMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 480
Query: 481 QAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
QAGYMRELFDVIDSMR PPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW
Sbjct: 481 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
Query: 541 VLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLE 600
VLQELKKQGLQPSTSTYGLVM EVMLE
Sbjct: 541 VLQELKKQGLQPSTSTYGLVM----------------------------------EVMLE 600
Query: 601 CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALY 660
CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME RG+VGSAALY
Sbjct: 601 CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALY 660
Query: 661 YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKT 720
YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MK
Sbjct: 661 YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKA 720
Query: 721 FCSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTML 780
FCSPNLVTYNI+LKGYLEHGMFEEAREL QNLSE +NISTVSDYRDRVLPDIYMFNTML
Sbjct: 721 FCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTML 780
Query: 781 DASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRI 840
DASFAEKRWDDF YF+NQM LYGYHFNPKRHLRMILEAAR GKDELLETTWKHL+QADR
Sbjct: 781 DASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRT 840
Query: 841 PPPALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLI 900
PPP LLKERFCMK+ARGDY++AL CISNHNS DAHHFSE AWLNLLKEKRFPKDTVI+LI
Sbjct: 841 PPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELI 900
Query: 901 YKVSMLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNE 944
+KV M+ N+SPNPVF+NLLLSCKEFCRTR SVADHRLEETV TNE
Sbjct: 901 HKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRLEETVHTNE 912
BLAST of ClCG01G008850 vs. NCBI nr
Match:
XP_038894405.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 1528.8 bits (3957), Expect = 0.0e+00
Identity = 784/952 (82.35%), Postives = 823/952 (86.45%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMANVNLCIP+CERNGFPALHCTQN HNFFGFSFFPSS+SG DLN GD K+RVLRH
Sbjct: 1 MVGVIMANVNLCIPSCERNGFPALHCTQNSHNFFGFSFFPSSVSGPDLNFGDAKHRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
R HKCG+IKASSNGESDIRLPS NLLENDF FKPSFDEYVRVMETVRTRRYK+QSDD NK
Sbjct: 61 RVHKCGSIKASSNGESDIRLPSENLLENDFQFKPSFDEYVRVMETVRTRRYKRQSDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
LTMKENAS KSAE TSISKIDNGKNK TDVQ +VDVKNMFKRVDRKDLFNNTERITR RD
Sbjct: 121 LTMKENASVKSAEITSISKIDNGKNKVTDVQGNVDVKNMFKRVDRKDLFNNTERITRERD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNK DSKRKG++RSNDEVKGKVTPF SQ +DKQHE+KRN N S+ EPKVPR YNEK
Sbjct: 181 LSGNKIDSKRKGISRSNDEVKGKVTPFDSQVNDKQHEEKRNINRSNYTEPKVPRLYNEKR 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
INFKANTLD+KRE+ R + S M+IS KIW +DDTKPAKDIL A K+ VQLERNYI G+K
Sbjct: 241 INFKANTLDIKRESHRASNGSSMRISGKIWANDDTKPAKDILNAVKYSVQLERNYISGDK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
VGRKK EQSYR SKSGK+FLEF ++SSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ
Sbjct: 301 VGRKKTEQSYRESSKSGKRFLEFTEDSSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
ML KRLNG++IDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR
Sbjct: 361 MLCKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKL + + G + AGY
Sbjct: 421 ERFKSHKL------SEETCGGTQ-----------------------------FIPCNAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
M+ELFDVIDSMR PPKKKFKTG LEKWDPRL+PDIVIYNAVLNACVKRKNLEGAFWVLQE
Sbjct: 481 MKELFDVIDSMRSPPKKKFKTGVLEKWDPRLEPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LKKQGLQPSTSTYGLVM EVMLECGKY
Sbjct: 541 LKKQGLQPSTSTYGLVM----------------------------------EVMLECGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGRCKEALMQMEKICKVA KPLVVTYTGLIQACLDSKD++SAVYIFNHMKTFCSP
Sbjct: 661 RCLCSAGRCKEALMQMEKICKVATKPLVVTYTGLIQACLDSKDIRSAVYIFNHMKTFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVTYN++LKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF
Sbjct: 721 NLVTYNMLLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
AEKRWDDFGYF++QMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHL+QADR PPP
Sbjct: 781 AEKRWDDFGYFYDQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLAQADRTPPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
LLKERFCMKLARGDYS+ALSCISNH+SSD HHFSE WLNLLKEKRFPKDTVIQLI KVS
Sbjct: 841 LLKERFCMKLARGDYSEALSCISNHDSSDVHHFSESGWLNLLKEKRFPKDTVIQLINKVS 883
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLLTRND PNPVF+NLLLSCKEFCRTR SVADHRLEETVCTNETQSAAV+ I
Sbjct: 901 MLLTRNDLPNPVFKNLLLSCKEFCRTRISVADHRLEETVCTNETQSAAVVRI 883
BLAST of ClCG01G008850 vs. NCBI nr
Match:
KAG7019446.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1520.8 bits (3936), Expect = 0.0e+00
Identity = 771/952 (80.99%), Postives = 836/952 (87.82%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN NLCIP CE NGFPAL+CTQN H GFSFFPSS+SG+ LN G K+RVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
RGHKCGAIKASS GESDI+L SGNLLE DF FKPSFDEYVRVME+VR+RRYK+QSDD NK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
MKENASAKSAESTSIS I TDVQ ++DVKN VD +DLF+N+E+ITR+ D
Sbjct: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNKFDSKRKGVTRS DE+KGKVTPF SQ +DKQHE+KRN NWS+ IEPK RS ++K
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
++FKANTLDVK E+ V S MKIS+KIW DDDTKP KD+LK GK+GVQLE NYIPG+K
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
VGRKK EQSYRG SKSGK+F EF +ESSLEVEHAAFN+FDA DIMDKPRVSKMEMEERIQ
Sbjct: 301 VGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
MLSKRLNG++IDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQVIEWLQMR
Sbjct: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
MRELFDVIDSMR PPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LK+QGLQPST+TYGLVM EVML+CGKY
Sbjct: 541 LKEQGLQPSTTTYGLVM----------------------------------EVMLQCGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAI+ ME+RGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK+LQSAVYIFNHMK FCSP
Sbjct: 661 RCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVT NI+LKGYL+HGMF+EA+ELFQN+SE+GRNIS VSDYRDRVLPDIY FNTMLDASF
Sbjct: 721 NLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
AEKRWDDF +F+NQMLLYGYHFNPKRHLRMI+EAAR GKDELLETTWKHL+QADR PP
Sbjct: 781 AEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
L+KERFC+ LARGDYS+ALSCIS H+SSD HHFS+ AWLNLLKEKRFPKD+VI+LI+KVS
Sbjct: 841 LIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVS 900
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLL RNDSPNPV +NLLLS KEFCR+R +VAD RLEE VCTNE+QSA VMH+
Sbjct: 901 MLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTNESQSATVMHV 910
BLAST of ClCG01G008850 vs. ExPASy Swiss-Prot
Match:
Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 7.7e-204
Identity = 420/912 (46.05%), Postives = 558/912 (61.18%), Query Frame = 0
Query: 62 GHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNKL 121
G A+K S +GES + +P + F + S EY R +T R + D+L+ +
Sbjct: 172 GESSVALKLSKSGESSVTVPE----DESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLV 231
Query: 122 T--------MKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTE 181
K+ +KS ES+ K N + +D + + + +
Sbjct: 232 VEERRVQRIAKDARWSKSRESSVAVKWSNSGESSVTMPKDESFRRRYSKQEHH------- 291
Query: 182 RITRRRDLSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVP 241
R D S +G+ R + KG + Q K R WS E VP
Sbjct: 292 ---RSSDTS--------RGIARGS---KGDELELVVEERRVQRIAKDVR-WSKSDESLVP 351
Query: 242 RSYNEKLINFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGK-FGVQLE 301
S +E + N +RV D S + I + K G+ L
Sbjct: 352 VSEDESF--RRGNPKQEMVRYQRVSDTS-----------------RGIERGSKGDGLDLL 411
Query: 302 RNYIPGEKVGRKKNE---QSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFD-ALDIMDKP 361
E++ +++E G + G + + +S +E AF D + DI+DKP
Sbjct: 412 AEERRIERLANERHEIRSSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKP 471
Query: 362 RVSKMEMEERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWR 421
S++EME+RI+ L+K LNG++I+MPEW FS+ +RSAKIRY+D++++R+I LGKLGNWR
Sbjct: 472 ATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWR 531
Query: 422 RVLQVIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAY 481
RVLQVIEWLQ ++R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY
Sbjct: 532 RVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAY 591
Query: 482 HSIAVTLGQAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKR 541
SIAVTLGQAG+++ELF VID+MR PPKKKFK LEKWDPRL+PD+V+YNAVLNACV+R
Sbjct: 592 RSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQR 651
Query: 542 KNLEGAFWVLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVK 601
K EGAFWVLQ+LK++G +PS TYGL+M
Sbjct: 652 KQWEGAFWVLQQLKQRGQKPSPVTYGLIM------------------------------- 711
Query: 602 GYYEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRG 661
EVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV +E+ME RG
Sbjct: 712 ---EVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRG 771
Query: 662 IVGSAALYYDFARCLCSAGRCKEAL----------------------------MQMEKIC 721
IVGSAALYYD ARCLCSAGRC E L Q++KIC
Sbjct: 772 IVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKIC 831
Query: 722 KVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSPNLVTYNIVLKGYLEHGMFEE 781
+VANKPLVVTYTGLIQAC+DS ++++A YIF+ MK CSPNLVT NI+LK YL+ G+FEE
Sbjct: 832 RVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEE 891
Query: 782 ARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFGYFFNQMLLYGY 841
ARELFQ +SE G +I SD+ RVLPD Y FNTMLD +++WDDFGY + +ML +GY
Sbjct: 892 ARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 951
Query: 842 HFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPALLKERFCMKLARGDYSDALS 901
HFN KRHLRM+LEA+RAGK+E++E TW+H+ +++RIPP L+KERF KL +GD+ A+S
Sbjct: 952 HFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 1002
Query: 902 CISNHN----SSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVSMLL-TRNDSPNPVFEN 928
+++ N ++ FS AW +L RF +D+V++L+ V+ L +R++S + V N
Sbjct: 1012 SLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGN 1002
BLAST of ClCG01G008850 vs. ExPASy Swiss-Prot
Match:
Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)
HSP 1 Score: 383.3 bits (983), Expect = 8.2e-105
Identity = 217/589 (36.84%), Postives = 335/589 (56.88%), Query Frame = 0
Query: 357 ERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 416
E +++L RL+G I+ W F +MM + +++++ +L+++ LG+ +W++ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 417 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 476
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 477 QAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 536
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV + W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 537 VLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLE 596
V EL+K GL+P+ +TYGL M EVMLE
Sbjct: 363 VFVELRKNGLRPNGATYGLAM----------------------------------EVMLE 422
Query: 597 CGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAAL 656
GK++ VH+FFRK++ S P A+TYKVLV LW+EGK +EAV A+ +ME++G++G+ ++
Sbjct: 423 SGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSV 482
Query: 657 YYDFARCLCSAGRCKEALMQMEKICKVAN-KPLVVTYTGLIQACLDSKDLQSAVYIFNHM 716
YY+ A CLC+ GR +A++++ ++ ++ N +PL +T+TGLI A L+ + + IF +M
Sbjct: 483 YYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM 542
Query: 717 KTFCSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNT 776
K C PN+ T N++LK Y + MF EA+ELF+ + VS ++P+ Y ++
Sbjct: 543 KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI---------VSRKETHLVPNEYTYSF 602
Query: 777 MLDASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQAD 836
ML+AS +W+ F + + M+L GY + +H M++EA+RAGK LLE + + +
Sbjct: 603 MLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDG 662
Query: 837 RIPPPALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQ 896
IP P E C A+GD+ A++ I N + + SE W +L +E +D + Q
Sbjct: 663 EIPHPLFFTELLCHATAKGDFQRAITLI-NTVALASFQISEEEWTDLFEEH---QDWLTQ 722
Query: 897 -LIYKVSMLLTRND-SPNPVFENLLLSCKEFCRTRNSVADHRLEETVCT 942
++K+S L D P NL S K C + +S A L V T
Sbjct: 723 DNLHKLSDHLIECDYVSEPTVSNLSKSLKSRCGSSSSSAQPLLAVDVTT 724
BLAST of ClCG01G008850 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.5e-21
Identity = 96/431 (22.27%), Postives = 180/431 (41.76%), Query Frame = 0
Query: 432 YTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSM 491
Y+ +D L K R +EA +F +M + P++ Y ++ G + E+ ++D M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLM 363
Query: 492 RFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTS 551
+ G + PD +++ ++ A K+ ++ A V ++++QGL P+
Sbjct: 364 -------VRNG--------IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 423
Query: 552 TYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLV---LLVKGYYEVMLECGKYNLVHEFFR 611
TYG V+ G D +Y+ + GL ++ + C K+ E
Sbjct: 424 TYGAVIGILCKS-GRVED-AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 483
Query: 612 KVQKSSI-PNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFARCLCSAG 671
++ I N + + ++++ KEG+ E+ E M R G+ + Y C AG
Sbjct: 484 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 543
Query: 672 RCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTF-CSPNLVTYN 731
+ EA+ + + V KP VTY+ LI ++ A+ +F M++ SP+++TYN
Sbjct: 544 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 603
Query: 732 IVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWD 791
I+L+G + A+EL+ ++E G I ++ +N +L K D
Sbjct: 604 IILQGLFQTRRTAAAKELYVRITESGTQI------------ELSTYNIILHGLCKNKLTD 663
Query: 792 DFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDE-------------LLETTWKHLSQA 845
D F + L + MI + G+++ L+ W + A
Sbjct: 664 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 704
BLAST of ClCG01G008850 vs. ExPASy Swiss-Prot
Match:
Q9SSR4 (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX=3702 GN=At1g52620 PE=2 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 2.4e-19
Identity = 96/407 (23.59%), Postives = 173/407 (42.51%), Query Frame = 0
Query: 447 EALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSM--RFPPKKKFKTGAL 506
+A+ ++ + + + S PD++A +S+ L ++ + + V D M R + T L
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL 211
Query: 507 EK------------------WDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGL 566
K W P+IV YN ++ K ++E A+ V +ELK +G
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 567 QPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLG----RGL---VLLVKGYYEVMLECG- 626
P+ T+G ++ G+C + +++ L RGL V + + G
Sbjct: 272 MPTLETFGTMIN------GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 331
Query: 627 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYD 686
K + + P+ TY +L+N L KEGK + AV ++ ++G++ + Y
Sbjct: 332 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 391
Query: 687 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYI-FNHMKTF 746
+ C + A + ++ + KP +VTY LI + S + AV + +
Sbjct: 392 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 451
Query: 747 CSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLD 806
SP+ YN+++ G + G F A+ LF + + RNI LPD Y++ T++D
Sbjct: 452 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD--RNI----------LPDAYVYATLID 511
Query: 807 ASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGK-DELL 824
+D+ F+ + G + H MI R+G DE L
Sbjct: 512 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
BLAST of ClCG01G008850 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 3.1e-19
Identity = 78/334 (23.35%), Postives = 140/334 (41.92%), Query Frame = 0
Query: 467 AYHSIAVTLGQAGYMRELFDVIDSMRFPPKKKFKTGALEKW-----------------DP 526
A S+ + LG + F + R PK + G L ++
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 527 RLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMD 586
+P + YN +++ K ++E A + +E+K +GL P T TY +DGFG
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY----NSMIDGFGKVGR 316
Query: 587 MEWMYWVLSLGRGL-----VLLVKGYYEVMLECGKYNLVHEFFRKVQKSSI-PNALTYKV 646
++ + + V+ + GK + EF+R+++ + + PN ++Y
Sbjct: 317 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 376
Query: 647 LVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA 706
LV+ KEG +A+ +M R G+V + Y C G +A ++ +V
Sbjct: 377 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 436
Query: 707 NKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTF-CSPNLVTYNIVLKGYLEHGMFEEAR 766
+ VVTYT LI D++ ++ A +F M T PNL +YN ++ G+++ + A
Sbjct: 437 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 496
Query: 767 ELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTML 777
EL L G + PD+ ++ T +
Sbjct: 497 ELLNELKGRG------------IKPDLLLYGTFI 514
BLAST of ClCG01G008850 vs. ExPASy TrEMBL
Match:
A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)
HSP 1 Score: 1567.4 bits (4057), Expect = 0.0e+00
Identity = 792/941 (84.17%), Postives = 841/941 (89.37%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN+NLCIPNCER GFP LHCT N HN F SFFPSS+SGTD ++ D KNRVLRH
Sbjct: 1 MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
R HKCG+IKA SNGESDI LPSGNLLE+DF FKPSFDEYV+VMETVRTRRYK+Q DD NK
Sbjct: 61 RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
LTMKEN SAKSAESTSISKIDNGKNK TDVQ +VDVKNMFKRVD+KDLFNNTERI +D
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNKFD +RK VTRSND+VKGK+TPF S +DKQHE+KRN NWSS IEP+V RS ++K
Sbjct: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKI--WDDDDTKPAKDILKAGKFGVQLERNYIPG 300
I+FKANTL+VK+E+ RV D + MK SEKI W DDD KPAK +LKAGK+G+QLER+Y PG
Sbjct: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
Query: 301 EKVGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEER 360
+KVGRKK EQSYRG S SGK+FLEF +++SLEVEHAAFNNFDA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
Query: 361 IQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQ 420
IQMLSKRLNG++IDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480
MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
Query: 481 GYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
GYMRELFDVIDSMR PPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
Query: 541 QELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECG 600
QELKKQ LQPSTSTYGLVM EVMLECG
Sbjct: 541 QELKKQSLQPSTSTYGLVM----------------------------------EVMLECG 600
Query: 601 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYD 660
KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME RGIVGSAALYYD
Sbjct: 601 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYD 660
Query: 661 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFC 720
FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMK FC
Sbjct: 661 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFC 720
Query: 721 SPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDA 780
SPNLVTYNI+LKGYLEHGMFEEARELFQNLSE RNISTVSDYRDRVLPDIYMFNTMLDA
Sbjct: 721 SPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDA 780
Query: 781 SFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPP 840
SFAEKRWDDF YF+NQM LYGYHFNPKRHLRMILEAAR GKDELLETTWKHL+QADR PP
Sbjct: 781 SFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPP 840
Query: 841 PALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYK 900
P LLKERFCMKLARGDYS+ALS I +HNS DAHHFSE AWLNLLKEKRFP+DTVI+LI+K
Sbjct: 841 PPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKEKRFPRDTVIELIHK 900
Query: 901 VSMLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETV 940
V M+LTRN+SPNPVF+NLLLSCKEFCRTR S+ADHRLEETV
Sbjct: 901 VGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEETV 906
BLAST of ClCG01G008850 vs. ExPASy TrEMBL
Match:
A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)
HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 788/947 (83.21%), Postives = 834/947 (88.07%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSIS--GTDLNIGDVKNRVL 60
MVGVIMANVNL IPNCER GFP LHCT N H F SFFPSS+S GTDLN D KNRVL
Sbjct: 1 MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60
Query: 61 RHRGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDL 120
RHR HKCG+IKA SNGESDI LP+GNLLE+DF FKPSFDEYV+VMETVRTRRYK+Q D
Sbjct: 61 RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120
Query: 121 NKLTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRR 180
NKLTMKEN SAKSAESTSISKIDNGKNK TDVQ +V+VKNMFKRVD+KDLFNNTERI R
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180
Query: 181 RDLSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNE 240
+ LSGNKFD + KGVTRSND+VKGK+TPF S +DKQHE+K+N NWSS IEPKV RS E
Sbjct: 181 KHLSGNKFD-RSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCE 240
Query: 241 KLINFKANTLDVKRENRRVCDQSPMKISEKI--WDDDDTKPAKDILKAGKFGVQLERNYI 300
K I+FKAN L+ K+E RV + MK SEKI W +DD KPAKD+LKAGK+G+QLER+Y
Sbjct: 241 KPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYS 300
Query: 301 PGEKVGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
PG+KVGRKK EQSYRG S SGK+FLEF +E+SLEVEHAAFNNFDALDIMDKPRVSKMEME
Sbjct: 301 PGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
Query: 361 ERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
ERIQMLSKRLNG++IDMPEWMFSQMMR AKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW
Sbjct: 361 ERIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
Query: 421 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 480
LQMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLG
Sbjct: 421 LQMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 480
Query: 481 QAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
QAGYMRELFDVIDSMR PPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW
Sbjct: 481 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
Query: 541 VLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLE 600
VLQELKKQGLQPSTSTYGLVM EVMLE
Sbjct: 541 VLQELKKQGLQPSTSTYGLVM----------------------------------EVMLE 600
Query: 601 CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALY 660
CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENME RG+VGSAALY
Sbjct: 601 CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEMRGVVGSAALY 660
Query: 661 YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKT 720
YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVY+FN MK
Sbjct: 661 YDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYVFNQMKA 720
Query: 721 FCSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTML 780
FCSPNLVTYNI+LKGYLEHGMFEEAREL QNLSE +NISTVSDYRDRVLPDIYMFNTML
Sbjct: 721 FCSPNLVTYNILLKGYLEHGMFEEARELLQNLSEQRQNISTVSDYRDRVLPDIYMFNTML 780
Query: 781 DASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRI 840
DASFAEKRWDDF YF+NQM LYGYHFNPKRHLRMILEAAR GKDELLETTWKHL+QADR
Sbjct: 781 DASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARVGKDELLETTWKHLAQADRT 840
Query: 841 PPPALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLI 900
PPP LLKERFCMK+ARGDY++AL CISNHNS DAHHFSE AWLNLLKEKRFPKDTVI+LI
Sbjct: 841 PPPPLLKERFCMKVARGDYTEALRCISNHNSGDAHHFSESAWLNLLKEKRFPKDTVIELI 900
Query: 901 YKVSMLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNE 944
+KV M+ N+SPNPVF+NLLLSCKEFCRTR SVADHRLEETV TNE
Sbjct: 901 HKVGMVFATNESPNPVFKNLLLSCKEFCRTRISVADHRLEETVHTNE 912
BLAST of ClCG01G008850 vs. ExPASy TrEMBL
Match:
A0A6J1KEH7 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495096 PE=4 SV=1)
HSP 1 Score: 1513.8 bits (3918), Expect = 0.0e+00
Identity = 772/952 (81.09%), Postives = 833/952 (87.50%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN NLCIP CE NGF AL+CTQN H G SFFPSS+SG+ LN G K+RVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
RGHKCGAIKASS GESDI+L SGNLLE DF FKPSFDEYVRVME+VR+RRYK+QSDD NK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
MKENASAKSAESTSIS I TDVQ ++DVKN VD +DLF+N+ERITR+ D
Sbjct: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNKFDSKRKGVTRS DE+KGKVTPF SQ +DKQHE+KRN NWS+ IEPKV RS ++K
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKR 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
++FKANTLDVK E+ V S MKISEKIW DDD KP KD+LK GK+GVQL+ NYIPG+K
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISEKIWADDDIKPTKDVLKVGKYGVQLKGNYIPGDK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
VGRKK EQSYRG SKSGK+F EF +ESSLEVEHAAFN+ DA DIMDKPRVSKMEMEERIQ
Sbjct: 301 VGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
MLSKRLNG++IDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQVIEWLQMR
Sbjct: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
MRELFDVIDSMR PPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LK+QGLQPST+TYGLVM EVML+CGKY
Sbjct: 541 LKEQGLQPSTTTYGLVM----------------------------------EVMLQCGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAI+ ME+RGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGR +EALMQMEKICKVANKPLVVTYTGLIQACLDSK+LQSAVYIFNHMK FCSP
Sbjct: 661 RCLCSAGRWEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVT NI+LKGYL+HGMF EA+ELFQN+SE+GRNIS VSDYRDRVLPDIY FNTMLDASF
Sbjct: 721 NLVTCNILLKGYLDHGMFNEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
AEKRWDDF +F+NQMLLYGYHFNPKRHLRMI+EAAR GKDELLETTWKHL+QADRI PP
Sbjct: 781 AEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRILPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
L+KERFC+ LARGDYS+ALSCIS H+SSD HHFS+ AWLNLLKEKRFPKD+VIQLI+KVS
Sbjct: 841 LIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLLKEKRFPKDSVIQLIHKVS 900
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLL RNDSPNPV +NLLLS KEFCR+R SVAD RLEE VCTNE+QSAAVMH+
Sbjct: 901 MLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTNESQSAAVMHV 910
BLAST of ClCG01G008850 vs. ExPASy TrEMBL
Match:
A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)
HSP 1 Score: 1510.7 bits (3910), Expect = 0.0e+00
Identity = 767/952 (80.57%), Postives = 832/952 (87.39%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN NLCIP CE NGFPAL+CTQN H GFS FPSS+SG+ LN G K+RVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
RGHKCGAIKASS GESDI+L SGNLLE DF FKPSFDEYVRVME+VR+RRYK+QSDD NK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
MKENASAKSAEST IS I TDVQ ++DVKN VD +DLF+N+E+ITR+ D
Sbjct: 121 --MKENASAKSAESTFISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
LSGNKFDSKRKGVTRS DE+KGKVTPF SQ +DKQHE+KRN NWS+ IEPK RS ++K
Sbjct: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
++FKANTLDVK E+ V S MKIS+KIW DDD+KP KD+LK GK+GVQLE NYIPG+K
Sbjct: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWADDDSKPTKDVLKVGKYGVQLEGNYIPGDK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
VGRKK EQSYRG SKSGK+F EF +ESSLEVEHAAFN+ DA DIMDKPRVSKMEMEERIQ
Sbjct: 301 VGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
MLS RLNG++IDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQVIEWLQMR
Sbjct: 361 MLSNRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
MRELFDVIDSMR PPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LK+QGLQPST+TYGLVM EVML+CGKY
Sbjct: 541 LKEQGLQPSTTTYGLVM----------------------------------EVMLQCGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAI+ ME+RGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK+LQSAVYIFNHMK FCSP
Sbjct: 661 RCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVT NI+LKGYL+HGMF+EA+ELFQN+SE+GRNIS VSDYRDRVLPDIY FNTMLDASF
Sbjct: 721 NLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
AEKRWDDF +F+NQMLLYGYHFNPKRHLRMI+EAAR GKDELLETTWKHL+QADR PP
Sbjct: 781 AEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
L+KERFC+ LARGDYS+ALSCIS H+SSD HHFS+ AWLNLLKEKRFPKD+VI+LI+KVS
Sbjct: 841 LIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVS 900
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLL RNDSPNPV +NLLLS KEFCR+R SVAD RLEE VCTNE+QSA VMH+
Sbjct: 901 MLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTNESQSATVMHV 910
BLAST of ClCG01G008850 vs. ExPASy TrEMBL
Match:
A0A6J1CLQ9 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012614 PE=4 SV=1)
HSP 1 Score: 1504.6 bits (3894), Expect = 0.0e+00
Identity = 763/952 (80.15%), Postives = 825/952 (86.66%), Query Frame = 0
Query: 1 MVGVIMANVNLCIPNCERNGFPALHCTQNFHNFFGFSFFPSSISGTDLNIGDVKNRVLRH 60
MVGVIMAN N+CIP CERNGF ALHCTQ+ HN FGFS FPS ISG LN+G KNR+ R+
Sbjct: 1 MVGVIMANANMCIPCCERNGFRALHCTQSSHNLFGFSLFPSPISGIGLNVGYEKNRIFRY 60
Query: 61 RGHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNK 120
RG+KCGAI+ SS GESDIRL +GN+LENDF FKPSFDEYVRVME+VRT RYKKQ DD NK
Sbjct: 61 RGNKCGAIRVSSKGESDIRLQNGNVLENDFLFKPSFDEYVRVMESVRTSRYKKQPDDPNK 120
Query: 121 LTMKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTERITRRRD 180
L MKENASAKSAES+S+S+IDN K K TDVQ +VDVKNMFKRVD+K LFNN ER+TR++D
Sbjct: 121 LKMKENASAKSAESSSVSEIDNEKTKVTDVQGNVDVKNMFKRVDQKKLFNNAERVTRKKD 180
Query: 181 LSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVPRSYNEKL 240
L NKFD+KRKG+TR+ DE +GKVT F SQ +DKQHE++R RN IEPKV R NE L
Sbjct: 181 LLENKFDNKRKGITRTKDEFRGKVTHFDSQVNDKQHEEQRKRNRLDCIEPKVRRLNNEAL 240
Query: 241 INFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGKFGVQLERNYIPGEK 300
+ KANTLD+KR+ +RVCD+S MK E+IW D DTK AK L+ GK GVQL RNY+PGEK
Sbjct: 241 VCSKANTLDIKRQRQRVCDESSMKTVERIWADGDTKLAKGDLEVGKSGVQLARNYVPGEK 300
Query: 301 VGRKKNEQSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFDALDIMDKPRVSKMEMEERIQ 360
V KK QSY+G SKSGK F+E +ESSLEVE AA NNFDALDIMDKPRVSKMEMEERIQ
Sbjct: 301 VSGKKTGQSYQGLSKSGKPFIESTEESSLEVERAALNNFDALDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEWLQMR 420
MLSKRLNG++IDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQVIEWLQMR
Sbjct: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQE 540
MRELFDVIDSMR PPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLECGKY 600
LKKQGLQPSTSTYGLVM EVMLECGKY
Sbjct: 541 LKKQGLQPSTSTYGLVM----------------------------------EVMLECGKY 600
Query: 601 NLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFA 660
NLVHEFFRKVQ+SSIPNALTYKVLVNTL KEGKTDEAVLAI+NMERRGIVGSAALYYDFA
Sbjct: 601 NLVHEFFRKVQRSSIPNALTYKVLVNTLSKEGKTDEAVLAIQNMERRGIVGSAALYYDFA 660
Query: 661 RCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSP 720
RCLCSAGRCKEALMQ+EKICKVANKPLVVTYTGLIQACLDSK+L SAVYIFNHMK FCSP
Sbjct: 661 RCLCSAGRCKEALMQIEKICKVANKPLVVTYTGLIQACLDSKNLDSAVYIFNHMKAFCSP 720
Query: 721 NLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASF 780
NLVTYNI+LKGYL+HGMFEEARELFQNLSE G++IST+SDY+DRVLPDIY FN MLDA F
Sbjct: 721 NLVTYNILLKGYLDHGMFEEARELFQNLSESGQSISTISDYKDRVLPDIYTFNIMLDAFF 780
Query: 781 AEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPA 840
A KRWDDFGYF+NQM LYGYHFNPKRHLRMILEA RAGKDE+LETTWKHL+Q DR PP
Sbjct: 781 AVKRWDDFGYFYNQMFLYGYHFNPKRHLRMILEAGRAGKDEILETTWKHLAQTDRTLPPP 840
Query: 841 LLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVS 900
L+KERFCMKLARGDYS+ALSCISNH+SSDAHHFSE AWLNLLKEK FPKDTVI LI+KVS
Sbjct: 841 LVKERFCMKLARGDYSEALSCISNHHSSDAHHFSESAWLNLLKEKGFPKDTVILLIHKVS 900
Query: 901 MLLTRNDSPNPVFENLLLSCKEFCRTRNSVADHRLEETVCTNETQSAAVMHI 953
MLLT N PNPVF+NLL SCKEFCRTR +VAD +LE+ VC +ETQSAAVMHI
Sbjct: 901 MLLTGNHPPNPVFQNLLSSCKEFCRTRITVADSKLEQIVCRDETQSAAVMHI 918
BLAST of ClCG01G008850 vs. TAIR 10
Match:
AT1G30610.2 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 724.5 bits (1869), Expect = 1.1e-208
Identity = 419/884 (47.40%), Postives = 557/884 (63.01%), Query Frame = 0
Query: 62 GHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNKL 121
G A+K S +GES + +P + F + S EY R +T R + D+L+ +
Sbjct: 172 GESSVALKLSKSGESSVTVPE----DESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLV 231
Query: 122 T--------MKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTE 181
K+ +KS ES+ K N + +D + + + +
Sbjct: 232 VEERRVQRIAKDARWSKSRESSVAVKWSNSGESSVTMPKDESFRRRYSKQEHH------- 291
Query: 182 RITRRRDLSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVP 241
R D S +G+ R + KG + Q K R WS E VP
Sbjct: 292 ---RSSDTS--------RGIARGS---KGDELELVVEERRVQRIAKDVR-WSKSDESLVP 351
Query: 242 RSYNEKLINFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGK-FGVQLE 301
S +E + N +RV D S + I + K G+ L
Sbjct: 352 VSEDESF--RRGNPKQEMVRYQRVSDTS-----------------RGIERGSKGDGLDLL 411
Query: 302 RNYIPGEKVGRKKNE---QSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFD-ALDIMDKP 361
E++ +++E G + G + + +S +E AF D + DI+DKP
Sbjct: 412 AEERRIERLANERHEIRSSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKP 471
Query: 362 RVSKMEMEERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWR 421
S++EME+RI+ L+K LNG++I+MPEW FS+ +RSAKIRY+D++++R+I LGKLGNWR
Sbjct: 472 ATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWR 531
Query: 422 RVLQVIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAY 481
RVLQVIEWLQ ++R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY
Sbjct: 532 RVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAY 591
Query: 482 HSIAVTLGQAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKR 541
SIAVTLGQAG+++ELF VID+MR PPKKKFK LEKWDPRL+PD+V+YNAVLNACV+R
Sbjct: 592 RSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQR 651
Query: 542 KNLEGAFWVLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVK 601
K EGAFWVLQ+LK++G +PS TYGL+M
Sbjct: 652 KQWEGAFWVLQQLKQRGQKPSPVTYGLIM------------------------------- 711
Query: 602 GYYEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRG 661
EVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV +E+ME RG
Sbjct: 712 ---EVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRG 771
Query: 662 IVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAV 721
IVGSAALYYD ARCLCSAGRC E L ++KIC+VANKPLVVTYTGLIQAC+DS ++++A
Sbjct: 772 IVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAA 831
Query: 722 YIFNHMKTFCSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPD 781
YIF+ MK CSPNLVT NI+LK YL+ G+FEEARELFQ +SE G +I SD+ RVLPD
Sbjct: 832 YIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPD 891
Query: 782 IYMFNTMLDASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWK 841
Y FNTMLD +++WDDFGY + +ML +GYHFN KRHLRM+LEA+RAGK+E++E TW+
Sbjct: 892 TYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWE 951
Query: 842 HLSQADRIPPPALLKERFCMKLARGDYSDALSCISNHN----SSDAHHFSEPAWLNLLKE 901
H+ +++RIPP L+KERF KL +GD+ A+S +++ N ++ FS AW +L
Sbjct: 952 HMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVL-- 974
Query: 902 KRFPKDTVIQLIYKVSMLL-TRNDSPNPVFENLLLSCKEFCRTR 928
RF +D+V++L+ V+ L +R++S + V NLL SCK++ +TR
Sbjct: 1012 SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTR 974
BLAST of ClCG01G008850 vs. TAIR 10
Match:
AT1G30610.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 712.2 bits (1837), Expect = 5.5e-205
Identity = 420/912 (46.05%), Postives = 558/912 (61.18%), Query Frame = 0
Query: 62 GHKCGAIKASSNGESDIRLPSGNLLENDFPFKPSFDEYVRVMETVRTRRYKKQSDDLNKL 121
G A+K S +GES + +P + F + S EY R +T R + D+L+ +
Sbjct: 172 GESSVALKLSKSGESSVTVPE----DESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLV 231
Query: 122 T--------MKENASAKSAESTSISKIDNGKNKGTDVQRDVDVKNMFKRVDRKDLFNNTE 181
K+ +KS ES+ K N + +D + + + +
Sbjct: 232 VEERRVQRIAKDARWSKSRESSVAVKWSNSGESSVTMPKDESFRRRYSKQEHH------- 291
Query: 182 RITRRRDLSGNKFDSKRKGVTRSNDEVKGKVTPFYSQADDKQHEKKRNRNWSSDIEPKVP 241
R D S +G+ R + KG + Q K R WS E VP
Sbjct: 292 ---RSSDTS--------RGIARGS---KGDELELVVEERRVQRIAKDVR-WSKSDESLVP 351
Query: 242 RSYNEKLINFKANTLDVKRENRRVCDQSPMKISEKIWDDDDTKPAKDILKAGK-FGVQLE 301
S +E + N +RV D S + I + K G+ L
Sbjct: 352 VSEDESF--RRGNPKQEMVRYQRVSDTS-----------------RGIERGSKGDGLDLL 411
Query: 302 RNYIPGEKVGRKKNE---QSYRGPSKSGKQFLEFPQESSLEVEHAAFNNFD-ALDIMDKP 361
E++ +++E G + G + + +S +E AF D + DI+DKP
Sbjct: 412 AEERRIERLANERHEIRSSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKP 471
Query: 362 RVSKMEMEERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWR 421
S++EME+RI+ L+K LNG++I+MPEW FS+ +RSAKIRY+D++++R+I LGKLGNWR
Sbjct: 472 ATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWR 531
Query: 422 RVLQVIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAY 481
RVLQVIEWLQ ++R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY
Sbjct: 532 RVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAY 591
Query: 482 HSIAVTLGQAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKR 541
SIAVTLGQAG+++ELF VID+MR PPKKKFK LEKWDPRL+PD+V+YNAVLNACV+R
Sbjct: 592 RSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQR 651
Query: 542 KNLEGAFWVLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVK 601
K EGAFWVLQ+LK++G +PS TYGL+M
Sbjct: 652 KQWEGAFWVLQQLKQRGQKPSPVTYGLIM------------------------------- 711
Query: 602 GYYEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRG 661
EVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV +E+ME RG
Sbjct: 712 ---EVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRG 771
Query: 662 IVGSAALYYDFARCLCSAGRCKEAL----------------------------MQMEKIC 721
IVGSAALYYD ARCLCSAGRC E L Q++KIC
Sbjct: 772 IVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKIC 831
Query: 722 KVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTFCSPNLVTYNIVLKGYLEHGMFEE 781
+VANKPLVVTYTGLIQAC+DS ++++A YIF+ MK CSPNLVT NI+LK YL+ G+FEE
Sbjct: 832 RVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEE 891
Query: 782 ARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFGYFFNQMLLYGY 841
ARELFQ +SE G +I SD+ RVLPD Y FNTMLD +++WDDFGY + +ML +GY
Sbjct: 892 ARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 951
Query: 842 HFNPKRHLRMILEAARAGKDELLETTWKHLSQADRIPPPALLKERFCMKLARGDYSDALS 901
HFN KRHLRM+LEA+RAGK+E++E TW+H+ +++RIPP L+KERF KL +GD+ A+S
Sbjct: 952 HFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 1002
Query: 902 CISNHN----SSDAHHFSEPAWLNLLKEKRFPKDTVIQLIYKVSMLL-TRNDSPNPVFEN 928
+++ N ++ FS AW +L RF +D+V++L+ V+ L +R++S + V N
Sbjct: 1012 SLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGN 1002
BLAST of ClCG01G008850 vs. TAIR 10
Match:
AT5G67570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 383.3 bits (983), Expect = 5.8e-106
Identity = 217/589 (36.84%), Postives = 335/589 (56.88%), Query Frame = 0
Query: 357 ERIQMLSKRLNGSNIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 416
E +++L RL+G I+ W F +MM + +++++ +L+++ LG+ +W++ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 417 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 476
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 477 QAGYMRELFDVIDSMRFPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 536
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV + W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 537 VLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLGRGLVLLVKGYYEVMLE 596
V EL+K GL+P+ +TYGL M EVMLE
Sbjct: 363 VFVELRKNGLRPNGATYGLAM----------------------------------EVMLE 422
Query: 597 CGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAAL 656
GK++ VH+FFRK++ S P A+TYKVLV LW+EGK +EAV A+ +ME++G++G+ ++
Sbjct: 423 SGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSV 482
Query: 657 YYDFARCLCSAGRCKEALMQMEKICKVAN-KPLVVTYTGLIQACLDSKDLQSAVYIFNHM 716
YY+ A CLC+ GR +A++++ ++ ++ N +PL +T+TGLI A L+ + + IF +M
Sbjct: 483 YYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM 542
Query: 717 KTFCSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNT 776
K C PN+ T N++LK Y + MF EA+ELF+ + VS ++P+ Y ++
Sbjct: 543 KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI---------VSRKETHLVPNEYTYSF 602
Query: 777 MLDASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGKDELLETTWKHLSQAD 836
ML+AS +W+ F + + M+L GY + +H M++EA+RAGK LLE + + +
Sbjct: 603 MLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDG 662
Query: 837 RIPPPALLKERFCMKLARGDYSDALSCISNHNSSDAHHFSEPAWLNLLKEKRFPKDTVIQ 896
IP P E C A+GD+ A++ I N + + SE W +L +E +D + Q
Sbjct: 663 EIPHPLFFTELLCHATAKGDFQRAITLI-NTVALASFQISEEEWTDLFEEH---QDWLTQ 722
Query: 897 -LIYKVSMLLTRND-SPNPVFENLLLSCKEFCRTRNSVADHRLEETVCT 942
++K+S L D P NL S K C + +S A L V T
Sbjct: 723 DNLHKLSDHLIECDYVSEPTVSNLSKSLKSRCGSSSSSAQPLLAVDVTT 724
BLAST of ClCG01G008850 vs. TAIR 10
Match:
AT1G52620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 99.4 bits (246), Expect = 1.7e-20
Identity = 96/407 (23.59%), Postives = 173/407 (42.51%), Query Frame = 0
Query: 447 EALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSM--RFPPKKKFKTGAL 506
+A+ ++ + + + S PD++A +S+ L ++ + + V D M R + T L
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL 211
Query: 507 EK------------------WDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGL 566
K W P+IV YN ++ K ++E A+ V +ELK +G
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 567 QPSTSTYGLVMEKKVDGFGYCMDMEWMYWVLSLG----RGL---VLLVKGYYEVMLECG- 626
P+ T+G ++ G+C + +++ L RGL V + + G
Sbjct: 272 MPTLETFGTMIN------GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 331
Query: 627 KYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYD 686
K + + P+ TY +L+N L KEGK + AV ++ ++G++ + Y
Sbjct: 332 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 391
Query: 687 FARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYI-FNHMKTF 746
+ C + A + ++ + KP +VTY LI + S + AV + +
Sbjct: 392 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 451
Query: 747 CSPNLVTYNIVLKGYLEHGMFEEARELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTMLD 806
SP+ YN+++ G + G F A+ LF + + RNI LPD Y++ T++D
Sbjct: 452 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD--RNI----------LPDAYVYATLID 511
Query: 807 ASFAEKRWDDFGYFFNQMLLYGYHFNPKRHLRMILEAARAGK-DELL 824
+D+ F+ + G + H MI R+G DE L
Sbjct: 512 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
BLAST of ClCG01G008850 vs. TAIR 10
Match:
AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-20
Identity = 78/334 (23.35%), Postives = 140/334 (41.92%), Query Frame = 0
Query: 467 AYHSIAVTLGQAGYMRELFDVIDSMRFPPKKKFKTGALEKW-----------------DP 526
A S+ + LG + F + R PK + G L ++
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 527 RLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQGLQPSTSTYGLVMEKKVDGFGYCMD 586
+P + YN +++ K ++E A + +E+K +GL P T TY +DGFG
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY----NSMIDGFGKVGR 316
Query: 587 MEWMYWVLSLGRGL-----VLLVKGYYEVMLECGKYNLVHEFFRKVQKSSI-PNALTYKV 646
++ + + V+ + GK + EF+R+++ + + PN ++Y
Sbjct: 317 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 376
Query: 647 LVNTLWKEGKTDEAVLAIENMERRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA 706
LV+ KEG +A+ +M R G+V + Y C G +A ++ +V
Sbjct: 377 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 436
Query: 707 NKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKTF-CSPNLVTYNIVLKGYLEHGMFEEAR 766
+ VVTYT LI D++ ++ A +F M T PNL +YN ++ G+++ + A
Sbjct: 437 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 496
Query: 767 ELFQNLSEHGRNISTVSDYRDRVLPDIYMFNTML 777
EL L G + PD+ ++ T +
Sbjct: 497 ELLNELKGRG------------IKPDLLLYGTFI 514
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038894404.1 | 0.0e+00 | 87.18 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X1 ... | [more] |
XP_031741862.1 | 0.0e+00 | 84.17 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucumis sa... | [more] |
XP_008459122.1 | 0.0e+00 | 83.21 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic ... | [more] |
XP_038894405.1 | 0.0e+00 | 82.35 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic isoform X2 ... | [more] |
KAG7019446.1 | 0.0e+00 | 80.99 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9SA76 | 7.7e-204 | 46.05 | Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop... | [more] |
Q9FJW6 | 8.2e-105 | 36.84 | Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop... | [more] |
Q76C99 | 2.5e-21 | 22.27 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Q9SSR4 | 2.4e-19 | 23.59 | Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX... | [more] |
P0C894 | 3.1e-19 | 23.35 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LVN7 | 0.0e+00 | 84.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1 | [more] |
A0A1S3C8Z0 | 0.0e+00 | 83.21 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ... | [more] |
A0A6J1KEH7 | 0.0e+00 | 81.09 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbit... | [more] |
A0A6J1EH18 | 0.0e+00 | 80.57 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo... | [more] |
A0A6J1CLQ9 | 0.0e+00 | 80.15 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT1G30610.2 | 1.1e-208 | 47.40 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G30610.1 | 5.5e-205 | 46.05 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G67570.1 | 5.8e-106 | 36.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G52620.1 | 1.7e-20 | 23.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G02150.1 | 2.2e-20 | 23.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |