ClCG01G008200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G008200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type E3 ubiquitin transferase
Location	CG_Chr01: 9480026 .. 9480970 (+)
RNA-Seq Expression	ClCG01G008200
Synteny	ClCG01G008200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

mRNA sequence

ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

Coding sequence (CDS)

ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

Protein sequence

MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDHGGGNDSN

Homology

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BLAST of ClCG01G008200 vs. NCBI nr
Match: XP_038907201.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 272/309 (88.03%), Postives = 283/309 (91.59%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MS+ VDKPFFCHQCDRAVTV+VSISSDPLCPFC+EGFLEEYD+SN N N N+  DPRSFF
Sbjct: 1   MSAVVDKPFFCHQCDRAVTVSVSISSDPLCPFCHEGFLEEYDHSNPNSNSNVNLDPRSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            PHPFRRF+PLVFSSS VVDLQNP LFSRT TPPP  SSS  H  YDPFVFLQNHLRG+F
Sbjct: 61  LPHPFRRFSPLVFSSSTVVDLQNPSLFSRTLTPPPTQSSSSVHPEYDPFVFLQNHLRGLF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIPRHSSHSGVSMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KL TVTVTE LLNSEMNQCAVC+D FEKG KVKQMPC HVFHDYC+LPWLELHNSCPVCR
Sbjct: 181 KLPTVTVTEDLLNSEMNQCAVCIDEFEKGIKVKQMPCKHVFHDYCILPWLELHNSCPVCR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDDADYENRTRGNRVQ   SSGEESGSGNSG+STGRVERRFRVPLWWPFGGRNDGS
Sbjct: 241 FELPTDDADYENRTRGNRVQANESSGEESGSGNSGNSTGRVERRFRVPLWWPFGGRNDGS 300

Query: 306 DHGGGNDSN 315
           D GGGNDS+
Sbjct: 301 DSGGGNDSD 309

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BLAST of ClCG01G008200 vs. NCBI nr
Match: XP_004149872.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_031741982.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50936.1 hypothetical protein Csa_023085 [Cucumis sativus])

HSP 1 Score: 550.4 bits (1417), Expect = 9.8e-153
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+    NL FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNS----NLNFDPTSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVHHEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 306 D 307
           D
Sbjct: 301 D 297

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BLAST of ClCG01G008200 vs. NCBI nr
Match: KAA0055876.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 541.6 bits (1394), Expect = 4.5e-150
Identity = 261/308 (84.74%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRA+TV+VSISSDP CP C+EGFL+EY NSN+N N+NL  D RSFF
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNL--DLRSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT   PPQSSSSVH EPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ES ADVVFEIPRHS HSGV MPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE
Sbjct: 121 ESDADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCA+C+D FEKG +VKQMPC HVFHDYCLLPWLELHNSC VCR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRT GNR+QG  SSGEESGS + GSST RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGS 300

Query: 306 DHGGGNDS 314
           D GGG DS
Sbjct: 301 DSGGGIDS 306

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BLAST of ClCG01G008200 vs. NCBI nr
Match: XP_022938450.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 260/313 (83.07%), Postives = 277/313 (88.50%), Query Frame = 0


Query: 1   MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFD 60
           M +T   +AVDKPFFCHQCDRAVTV VS+SSDPLCPFCNEGFLEEY+NSN+N NVNL  D
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNL--D 60

Query: 61  PRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNH 120
             +   P PFR FNPLV SSS VVDLQNPGLFSRT +   QS+SSV  EPYDPFVFLQNH
Sbjct: 61  RGTLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNH 120

Query: 121 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180
           LRGIF+SGADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 240
           KSAIEKL TVTVTE LLNSEMNQCAVC+DGFEK TKVKQMPC HVFHDYC+LPWLELHNS
Sbjct: 181 KSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 300
           CPVCRFELPTDD+DYENRTRG++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGG
Sbjct: 241 CPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDHGGGNDS 314
           RNDGSD G GN S
Sbjct: 301 RNDGSDSGDGNVS 311

[Close]

BLAST of ClCG01G008200 vs. NCBI nr
Match: XP_023551575.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.6 bits (1355), Expect = 1.5e-145
Identity = 256/313 (81.79%), Postives = 274/313 (87.54%), Query Frame = 0


Query: 1   MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFD 60
           M +T   +AVDKPFFCHQCDRAVTV VS SSDPLCPFCNEGFLEEY+NSN+N NVNL  D
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVIVSPSSDPLCPFCNEGFLEEYENSNSNSNVNL--D 60

Query: 61  PRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNH 120
             +   P PFR FNPLV SSS VVDLQNPGLFSRT +   QS+SSV  EPYDPFVFLQNH
Sbjct: 61  RGTLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNH 120

Query: 121 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180
           LRGIF+SGADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 240
           KSAIEKL T+TVTE LLNSEMNQCAVC+DGFEK T+VKQMPC HVFHDYC+LPWLELHNS
Sbjct: 181 KSAIEKLPTMTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 300
           CPVCRFELPTDD+DYENRTR ++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGG
Sbjct: 241 CPVCRFELPTDDSDYENRTRASQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDHGGGNDS 314
           RNDGSD   GN S
Sbjct: 301 RNDGSDSCDGNVS 311

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BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.6e-89
Identity = 171/308 (55.52%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPR---SFFP 69
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY+  + NPN +L F+P    SFFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE--DPNPNQSLNFNPNSSDSFFP 76

Query: 70  -PHPFRRFNPLVFSSSMVV--DLQNPGLFSRTSTPPPQSS-SSVHHEPYDPFVFLQNHLR 129
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 130 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 189
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 190 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 249
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 250 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 310 DGSDHGGG 311
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]

BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.2e-86
Identity = 169/315 (53.65%), Postives = 196/315 (62.22%), Query Frame = 0


Query: 11  DKPFFCHQCDRAVTVTVS-ISSDPLCPFCNEGFLEEYDNSN-------ANPNVN-LEFDP 70
           +KPFFC+QC+R V VT+S  SSDP CP CNEGFLEEYDN N        NPN N + F  
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 71  RSFFPPHPFRRFNPLVF--------SSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDP 130
                  PF    PL+F        SSS  +D  NP L        P  S       +DP
Sbjct: 80  LFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSG------PTRSGRGDPFAFDP 139

Query: 131 FVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNR 190
           F F+QNHL  +  SGA + F I  + S  G  +P N GDYFIGPGLEQLIQ LA+NDPNR
Sbjct: 140 FTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNR 199

Query: 191 YGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLP 250
           YGTPPASKSAIE L  V +T+  LNSE NQCAVC+D FE+GT+ KQMPC H++H  CLLP
Sbjct: 200 YGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLP 259

Query: 251 WLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVP 309
           WLELHNSCPVCR ELPTDD DYE R RG +    G+ G+ SG  + G +   VER FR+ 
Sbjct: 260 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR-TVERSFRIS 319

[Close]

BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-33
Identity = 102/307 (33.22%), Postives = 146/307 (47.56%), Query Frame = 0


Query: 15  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPH--PFRR 74
           +CH+C RAV +      +P+C +C  GF+EE D + A+P     FD    F  H     R
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASP-----FD---MFRSHRGVVER 68

Query: 75  FNPLVFSSSMVVDLQN---PGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGA 134
                   +  V ++N        R       SS   +     P +     +   +    
Sbjct: 69  DQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLTG 128

Query: 135 DVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLS 194
           D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L 
Sbjct: 129 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALP 188

Query: 195 TVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFEL 254
           T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVCR EL
Sbjct: 189 TIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 248

Query: 255 P--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPF---GGRND 311
           P  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF   G  + 
Sbjct: 249 PSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSSS 296

[Close]

BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-33
Identity = 95/296 (32.09%), Postives = 144/296 (48.65%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           M+ A    ++CH+C++A  +  ++  +  CP C  GF+EE  +       N + +P    
Sbjct: 1   MAEAAITRYWCHECEQA--IEEAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEP---- 60

Query: 66  PPHPFRRFNPLVF-SSSMVVDLQNPGL---------FSRTSTPPPQSSSSVHHEPYDPFV 125
               F ++NP+     +M  D ++  L           R ++   +   S+H +  D   
Sbjct: 61  ---GFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQE 120

Query: 126 FLQNHLRGIFESGADV---VFEIPRHSSHSGVSMPQN--FGDYFIGPGLEQLIQLLADND 185
              + L   F     +   V +        G S   +    +Y +G GL  L+Q LA++D
Sbjct: 121 RDSSILINAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESD 180

Query: 186 PNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYC 245
           P+R GTPPA K A+E L TV + EV+       C+VCLD  E G++ KQMPC H FH  C
Sbjct: 181 PSRNGTPPAKKEAVEALPTVKIEEVV------SCSVCLDDLEVGSQAKQMPCEHKFHSSC 240

Query: 246 LLPWLELHNSCPVCRFELPTDDA-DYENRTRGNRVQGIGSSGEESGSGNSGSSTGR 286
           +LPWLELH+SCPVCRFELP+++  D    +   RV+         G GN   S+ R
Sbjct: 241 ILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNR 281

[Close]

BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.2e-32
Identity = 96/309 (31.07%), Postives = 148/309 (47.90%), Query Frame = 0


Query: 8   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 67
           S++    +CH+C RAV +    + D +C +C  GF+EE D   +  + ++E DP +F   
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP-TFDLM 61

Query: 68  HPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFES 127
             F  F      S +     +  +  R  +   +S S++      P +            
Sbjct: 62  EAFSAF----MRSRLAERSYDREISGRLGSAGSESFSNL-----APLLIFGGQAPFRLAG 121

Query: 128 GADVVFEIPRHSSHSGVSMPQ--NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 187
           G +   E   + +  G+ + +  N GDYF GPGLE+LI+ L+    +R G PPA KS+I+
Sbjct: 122 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSID 181

Query: 188 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 247
            L T+ +T+  L S  + C VC D FE  ++ KQMPC+H++H  C++PWL  HNSCPVCR
Sbjct: 182 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 241

Query: 248 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 307
            ELP         +RG+      SS  +S    S +      RR      WPF   +  S
Sbjct: 242 KELP---------SRGS------SSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSSSS 281

Query: 308 DHGGGNDSN 315
                + +N
Sbjct: 302 TQNRRDTNN 281

[Close]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL
Match: A0A0A0KT93 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.7e-153
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+    NL FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNS----NLNFDPTSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVHHEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 306 D 307
           D
Sbjct: 301 D 297

[Close]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL
Match: A0A5A7UNL2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00740 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.2e-150
Identity = 261/308 (84.74%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRA+TV+VSISSDP CP C+EGFL+EY NSN+N N+NL  D RSFF
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNL--DLRSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT   PPQSSSSVH EPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ES ADVVFEIPRHS HSGV MPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE
Sbjct: 121 ESDADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCA+C+D FEKG +VKQMPC HVFHDYCLLPWLELHNSC VCR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRT GNR+QG  SSGEESGS + GSST RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGS 300

Query: 306 DHGGGNDS 314
           D GGG DS
Sbjct: 301 DSGGGIDS 306

[Close]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL
Match: A0A6J1FJU6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 260/313 (83.07%), Postives = 277/313 (88.50%), Query Frame = 0


Query: 1   MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFD 60
           M +T   +AVDKPFFCHQCDRAVTV VS+SSDPLCPFCNEGFLEEY+NSN+N NVNL  D
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNL--D 60

Query: 61  PRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNH 120
             +   P PFR FNPLV SSS VVDLQNPGLFSRT +   QS+SSV  EPYDPFVFLQNH
Sbjct: 61  RGTLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNH 120

Query: 121 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180
           LRGIF+SGADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 240
           KSAIEKL TVTVTE LLNSEMNQCAVC+DGFEK TKVKQMPC HVFHDYC+LPWLELHNS
Sbjct: 181 KSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 300
           CPVCRFELPTDD+DYENRTRG++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGG
Sbjct: 241 CPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDHGGGNDS 314
           RNDGSD G GN S
Sbjct: 301 RNDGSDSGDGNVS 311

[Close]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL
Match: A0A6J1K1C4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.8e-145
Identity = 254/313 (81.15%), Postives = 272/313 (86.90%), Query Frame = 0


Query: 1   MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFD 60
           M +T   +AVDKPFFCHQCDRAVTV +S SSDPLCPFCNEGFLEEY+NSN+N NVNL  D
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVILSPSSDPLCPFCNEGFLEEYENSNSNSNVNL--D 60

Query: 61  PRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNH 120
             +   P PFR FNPLV SSS VVDLQNPGLFSRT +   QS+SSV  E YDPFVFLQNH
Sbjct: 61  RGTLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEQYDPFVFLQNH 120

Query: 121 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180
           LRGIF+SGADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 240
           KS IEKL  VTVTE LLNSEMNQCAVC+DGFEK T+VKQMPC HVFHDYC+LPWLELHNS
Sbjct: 181 KSVIEKLPNVTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 300
           CPVCRFELPTDD+DYENRTRG++VQ   SSGEESGSGN GS+ GRVERRFRVPLWWPFGG
Sbjct: 241 CPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNRGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDHGGGNDS 314
           RNDG+D G GN S
Sbjct: 301 RNDGNDSGDGNVS 311

[Close]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL
Match: A0A6J1H9Y0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138
Identity = 247/313 (78.91%), Postives = 262/313 (83.71%), Query Frame = 0


Query: 7   SSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFP 66
           S+AVDK FFCHQCDR VTV VS S +PLCPFCNEGFLEEYD  ++N N+    D RSFF 
Sbjct: 3   SAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANL----DSRSFFL 62

Query: 67  PHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPP------QSSSSVHHEPYDPFVFLQNH 126
           P PFR FNPL FSSS VVDLQNPGLFSRT +P        QS SS   EP+DPFVFLQNH
Sbjct: 63  PDPFRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRHQSDSSGQPEPFDPFVFLQNH 122

Query: 127 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 186
           LRGIF+SGADVVFEI  H S SGVSMPQN GDYFIGPGLEQLIQLLA+NDPNR+GTPPAS
Sbjct: 123 LRGIFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPAS 182

Query: 187 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 246
           KSAIEKL  VTVTE LLNSEMNQCAVCLDGFEKG +VKQMPC H+FHDYCLLPWLELHNS
Sbjct: 183 KSAIEKLQNVTVTEELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNS 242

Query: 247 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 306
           CPVCRFEL TDD+DYENRTRG RVQ   S+GEE GSGNSGSS+ RVER FRVPLWWPFGG
Sbjct: 243 CPVCRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGG 302

Query: 307 RNDGSDHGGGNDS 314
           RNDGS  GGGNDS
Sbjct: 303 RNDGSGSGGGNDS 311

[Close]

BLAST of ClCG01G008200 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 2.5e-90
Identity = 171/308 (55.52%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPR---SFFP 69
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY+  + NPN +L F+P    SFFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE--DPNPNQSLNFNPNSSDSFFP 76

Query: 70  -PHPFRRFNPLVFSSSMVV--DLQNPGLFSRTSTPPPQSS-SSVHHEPYDPFVFLQNHLR 129
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 130 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 189
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 190 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 249
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 250 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 310 DGSDHGGG 311
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]

BLAST of ClCG01G008200 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-38
Identity = 86/178 (48.31%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 149 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 208
           + GDYFIGPGL+ L+Q LA+NDPNR GTPPA K A+E L TV + E L      QC+VCL
Sbjct: 210 SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVCL 269

Query: 209 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTD-DADYENRTRGNRVQGI 268
           D FEKGT+ K+MPC H FH  C++PWLELH+SCPVCRFELP+  D D E +T   RV   
Sbjct: 270 DDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRT 329

Query: 269 GSSGEESGSGNSGSSTGRVE------------RRFRVPLWWPFGGRNDGSDHGGGNDS 314
             +  E+ +GN   + G  +            RRF  P  WPF G    S     + S
Sbjct: 330 -RNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSSSSSSTS 378

[Close]

BLAST of ClCG01G008200 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-38
Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 149 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 208
           + GDYFIGPG E L+Q LA+NDPNRYGTPPA K A+E L+TV + E L      QC+VCL
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 209 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIG 268
           D FE GT+ K MPC H FH  CLLPWLELH+SCPVCR++LP D+A  ++ T  +   G  
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 269 SSGEESGSGNSGSSTGR 286
           S+   +  G   S   R
Sbjct: 294 SASATTSHGAENSDGNR 304

[Close]

BLAST of ClCG01G008200 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34
Identity = 102/307 (33.22%), Postives = 146/307 (47.56%), Query Frame = 0


Query: 15  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPH--PFRR 74
           +CH+C RAV +      +P+C +C  GF+EE D + A+P     FD    F  H     R
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASP-----FD---MFRSHRGVVER 68

Query: 75  FNPLVFSSSMVVDLQN---PGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGA 134
                   +  V ++N        R       SS   +     P +     +   +    
Sbjct: 69  DQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLTG 128

Query: 135 DVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLS 194
           D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L 
Sbjct: 129 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALP 188

Query: 195 TVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFEL 254
           T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVCR EL
Sbjct: 189 TIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 248

Query: 255 P--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPF---GGRND 311
           P  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF   G  + 
Sbjct: 249 PSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSSS 296

[Close]

BLAST of ClCG01G008200 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34
Identity = 102/307 (33.22%), Postives = 146/307 (47.56%), Query Frame = 0


Query: 15  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPH--PFRR 74
           +CH+C RAV +      +P+C +C  GF+EE D + A+P     FD    F  H     R
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASP-----FD---MFRSHRGVVER 68

Query: 75  FNPLVFSSSMVVDLQN---PGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGA 134
                   +  V ++N        R       SS   +     P +     +   +    
Sbjct: 69  DQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLTG 128

Query: 135 DVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLS 194
           D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L 
Sbjct: 129 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALP 188

Query: 195 TVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFEL 254
           T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVCR EL
Sbjct: 189 TIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 248

Query: 255 P--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPF---GGRND 311
           P  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF   G  + 
Sbjct: 249 PSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSSS 296

The following BLAST results are available for this feature:

BLAST of ClCG01G008200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907201.1	1.8e-159	88.03	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]
XP_004149872.1	9.8e-153	87.04	E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiq...	[more]
KAA0055876.1	4.5e-150	84.74	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3...	[more]
XP_022938450.1	1.1e-148	83.07	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023551575.1	1.5e-145	81.79	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG01G008200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	3.6e-89	55.52	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	8.2e-86	53.65	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	2.8e-33	33.22	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q6AVN2	6.2e-33	32.09	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q94AK4	5.2e-32	31.07	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of ClCG01G008200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT93	4.7e-153	87.04	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE...	[more]
A0A5A7UNL2	2.2e-150	84.74	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FJU6	5.4e-149	83.07	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684...	[more]
A0A6J1K1C4	4.8e-145	81.15	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 P...	[more]
A0A6J1H9Y0	1.5e-138	78.91	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423...	[more]

BLAST of ClCG01G008200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	2.5e-90	55.52	RING/U-box superfamily protein	[more]
AT5G56340.1	3.8e-38	48.31	RING/U-box superfamily protein	[more]
AT1G55530.1	6.5e-38	54.01	RING/U-box superfamily protein	[more]
AT2G40830.2	2.0e-34	33.22	RING-H2 finger C1A	[more]
AT2G40830.1	2.0e-34	33.22	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 204..244 e-value: 1.0E-7 score: 41.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 202..245 e-value: 1.2E-13 score: 51.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 204..245 score: 12.563043
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 14..46 e-value: 4.7E-13 score: 49.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 167..251 e-value: 1.5E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..314
None	No IPR available	PANTHER	PTHR15710:SF41	OS06G0101300 PROTEIN	coord: 9..292
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 9..292
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 203..245 e-value: 2.54496E-21 score: 83.136
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 183..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G008200.1	ClCG01G008200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity