ClCG01G006500 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G006500
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ubiquitin-conjugating enzyme E2 variant 1D
Location	CG_Chr01: 7328670 .. 7334727 (-)
RNA-Seq Expression	ClCG01G006500
Synteny	ClCG01G006500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGTTCAATTATGCAGTGTTTTTGTTAATCCTCTCTTTCTCTCTCATCTATCTTTTATGACACGCTTTCTCTCTCTACACTTGGGTCTTTAACTTTGGGAACCCTAACTCAGAAACCGAGCTTCAAAAATGGGTGATGAGGCCGCCAAGGTTGTTGGTAAGTCTTTCAAACCCCAGTAATTCCAATTCCACAATCCAACATTTTCAGTCGTGTTAGGTTTTTTGTTTTTTGTTTTATGTCAATTCTGTTTATGACAATAATTTCTTCTTATTCGGGATGTGGGAGTTTGTTTTTTTTGGTAATCAACTTCGATTTTGATTTTTCCTCCTACATGGGAGTGTGATGTGGGAAGTGGAAACTACGTTAGTTAATTCAGATCTTGAAGATAGTGTGGTGATTTGGGTTCTTCAAGTTGGGTTGTACTAACTGTTGGCTTAATCCATGACGTTCTACTTTTGGCTGTATATTATGTTATCTGATTGTTTAATTGCCGTTAATATCTTATTCTTCATATTATTCTATCATATTTCTCAATGAAACCTTGGTTTCTCATTGTTATTTCTTCGAGAATCTGTAATTTATTGCAAAATTGCCAATTAACCTACCAAAGATTGTCATGGTTGGAGGACAGGAAATGAGGGTGTATATGAGGACTGCTGTTTGAGTAGCAGGGACTCGTGGAAAATGTTGTTTAATTGTGATAGTAACTTCTGCTTATGAATTTAATCATACAACTTTACTTCCTCGGGTGATGGTATTCAACTTCATAGTTACAATGTCTGAAATTTCTTGGGGTCGTGCATTTGCTGGAGTTCTGTGCTGACGCTCCAATGATTTTTTAAATCTCATTTTGTTTTGGCCTCCTTACTTGTTAGATAGGTGTAGAATCAGAAGTAGTCTCATAAGAGGTTGGGAAGGAGGATACATGCTGTTGTATACAAGTGAGATTGATTTAGCTTAGTGGCTTGGTTTGACGGGGAACAACCAAACCAACAGGCTGTTAATATATTGTACTTGTCATTAAAATTAATAGATTGGTGACAGGCAACGGCCTTGTTGTTGACTATAATCACAACATGAAATGGTTTGTATTTGTTATTCTGATGATGGTGGCATGTGAAGCATATAAATACCCGCTTGTTCCACCTTAGAACCAAGGGCTTAAACAATTCTTTATGACTTATGAACCCTTTATCCTCTTTCATTCTGGAGTTGCTTTTATGCTCAAGAACATTACAGCCGTATTCAAAAATGTTGTTTCCTCATGTTCTAAGACTCAGACAACCATGATTTTCCTTTTCTGCCATCATAATGAAAAATTTTCACTTTGTTCTAAAAGTTTATACTTGTTGCACTATGAGCTCTAATTTTAACAATATTTTCCTTTTTGTAGTTCCTCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACTATTATTGGGCCACCTAACGTAAGTTCATTTTTCATCCCCTTTACTCCTTTTCTTATGGTGTCTTTTGATGGCATTTGGATCTGCCTTTATATACATTGATTTGGATAGTTACAAACAATGATGGAAATATGAATATCTACACAGCATCAAGTGTAGCATTTCATAGAAATGTTAACAAAAATTTTGAAAAATGAAAAATGCTGGTTGTTTTGTCGAATATTTTTTCTTCTGTAATCCCCTTTTGTAATTTTCTTGTGTGTTTTCTGTTTTCTGTTGTTCTTTTGGTTCCCTTTGGTTCAGGCCTTCTTTTTCTGTATGGCCCTTTTTGTTTTGCCCTGTATTTTTTTCCATTTGCTCTGAAAAGAAGTCATTCCCCTTCAGTAAGAAAATGTCAATGACAGATTACTAGGCACATTATTTGAGCATAAGCAAACAGTGAGATAATCTAGCTTATGCGATTAGACTACAGAAGAACCGAAAATTAAGAAAAGCTTCATGCATTGTTTAACATCTTTAAATTTGAATATGATTAATCCTTCACCACATGAAGGTTTTAGCATGTAGTTAGTGTACATCCCTGCTATTTTCATGCTAAACACTAAAGGAGTTAAATTTTGGAGTTGAGTACACATGATCCCGACTGACTTGATTTATGTTGTTGGCATTTTTTAAATGATCTGAATTTAGTTTCTCCGAGTACATTATTCTCTGATCTTTGTGATTCCTCTGTTCTTGTAGTCAGTAAATTCTATCTTCAGTTTCTACCTCCTAGAAACTCCCGAAAAGTGCTCAGATTTGATCAGTAATGTAGTTACATTACTAATTTCCTGATGGTCTTTACCTACAAATTCATGATAAAAAAAACTGGTATTTCTGATTACTGCTCTCATGTTCTTCAGCATTGCAGTGTCATTGCAGTGGTGGAAAGATGTATTCTTTTTTGTTGTTGTTTGGAGGGGATAAAAGAATTGTAAATTGAATCATTGCCTTCTTGCTTTGCAGACTGTCCATGAAGGACGCATCTATCAACTCAAGTTATTTTGTGGACAGGACTATCCTGATAATCCTCCAAATGTTAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGGGTGGTATGCGATGATTTTGTGAAGCACTTTCACCATAATATGACTGAATTAATTGACAGCATATCTCTATCTATATGACTAGGTGGAACCAAGCCTTTTCCCCATGCTTGCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTGAGTTTATTCACCTCTCCTCATGGAGAGCACATCCCTGTCATTAGAATATAAAGCAGATTGAATATATTTGCATGCTTTTTTTATGATAAACTCTCTCATTACATGGAAAAAAAGAAAAAATGTATTTGAGGGATGATGAGATATAGTATGTCCAGTCAAGAAGATTACAACCAATAAGGCTATCCACTCAAGGAGGTTCCAAGATGACTCAAACAAAAAAGATCTGTATGCAAAAATGATTGGAGCTAGTACGCCAATTTGGTGCCAAAAATCAAGCTATATCCCAAAACATCTAGTTTCCTGCGTTTTTTCCTCAAAACTGTTTGATTATTTTTTGCTCACGTCTCCTACAAGATCACTTTCATGGCATTAGCCTTTTAACCATCAGTTTAATCTTTGAAATTATGGCTTCAAAGGAGTTGGAAAACAGCTTGTTTGCCATCCTGAGGAATCACCATTGCAATCCAGAGGTATCAGAAATCTGAAGTAGCAGGATGATTGGAAGTTCAATAAAAGAAATTGTAGTCTTGGTCTTCCAAACATCTATGCATAATGCATTAGTTAACAGATACTGCAAAGCTCGGGAACTCCATCCTAATGCTGTCTCTAGTTTAAATATGCCCAGGCACCTAACTGCAAAGGAAGAACTTGACTTCCTTAGGAGTTTAGGCATTCATTTGCAATTGAGTGGGTCAGGTTCATGTATATTGCCAGGATCAAATGTTAAAGCTGATTGAAGTGACTTACAAGTGAATTGGCTTGACATATCCAAGGTTCAACTCTACATAACCTGGTCTTGGTTGGGTTTAGTGTAGGCCATTCCTGGGTCTGTGCTTCAAAGAGGAAGGGGGTTCTTTTGAAATTGAACTTCTGGTAACCCTCATCACAAACCGGTGTTTGCACATGAATTGTTCTTTCGACTCTGTCAAACCTTGCGTCCTGGGAAAATAATAGGAAATGGTTTTTCTTCCAACAATGAGGTTCCCAAAACTTAATTCTATCTTCTATGGCCATTTTAAGCACAAGCCTGTTTCCTGAATGCATTTGGAAATAAACATCCAAGAACTTTTGTAGGAACTTATGGTTTCCAGCCTCTTGATCAAGCACCTGTTTACTAATAAAAATCTAACCCATAAGGGTTATGTCTTTGAATTAAACCGTCATCGCCCTCTCGATAACAAAGCAGCATTTCTGTGCTTCAGGCCACCTCTCCCAAAACTAACTTTCAAAAAGAATGGAGACCTCCCGCCCAACCTGGTGATAACCTTTTTCACTACCGTCTCCTTGTCACAAGATATCTGTTTTTTTCTTTTTCCCCAACCTCATAACAAGTTGCCAAGGCATATTGAATCTAGATAGCAGTTACTGAGATTTCAGCAGTACCTAGATGCTTGGAAGACTGAGATTTCAGCAGCATCTAGATGCTACCTTTTGAAGTATATCATTTGTTCCATCAGGCTTTCCTCCTCTAAAAACTTATGGTTTCCTCAGGCTCCAGGTGGCACACCCAAGTAAAAAGACAAAGGACTCCTAATTATCGAAAAGGAACAAGTGCATGTGAGAGGGATGTTCAAAGTTGGAATATTTTATGCATAATAATCCTATTTATTTAATTTGCTTCCTATTAAATTTGTGAAATAGAGATTGTTCGCACTTGGGACCTCTGGCGATATAGGCTTGGAGCTACGAGTGGCAGTTTAGTCCAAGATCCAGATTTTCTAAGTGCCTAGGTGAAATGTTCTTAAGAAAATACTTCTATTTTCTCCTGCTTGAACTGGCATGGGACGTAATAGATCGAAAAAACCAAATGCCTCATGTAACCATACTGAACCATCTAGTTAGTCCTTGATTGTTGGTTTTCCATTTTTTTGACACATATTGCACTAACAAGTGTCTAATATGTATCTACAAGTGTTAGGAGTGTCCAAGTTTTTGACATGTGTCAGACACGGACACACTAACAAAACTTAAGCGTCCAAACTTCTTGGTAAACAACAGTTTAAATTGGAGGATTTTTATGGGGCTTTTATTTTAGTGGTGCTGGCATATCAGGGGTGACACTTCAGTGTCATCCATCAGGTGGGTTCATGAGATGTTTTCCTGTGGTTCCATATCTGGAAGGATAAAGAATTTTTACAATCTCATCAACCATCTGTCCTTGACAGAACTCCGTCTGTTAATGGTGACATCATGTGGTCGAATCTGAGAGAAACAGTCCCAGTGGGCTGTTAGACTTCTCATTACTTTGGAGTGAGTGGCTGGCTTGGGCTAGTTAGTTAAACATCTCTTTCTGGTCATGTCCTTGCTTCGGCCCTATTTATCGAGCAGATTAAAGATGAATTTGCTCTATTGAGCCATGCCCTTTATATGTTCCTCAAACCTCTCCTTTTTATTCTTTCCACTTTTGATCCATCATCTCTGCAAGTGCAAATTAGGGAAAAAGAAAATCCCTCTCCCGTGCTGAAGGCCCAAGCTATAACTATCCAGCAAAGCTAGTCGGTTAAAAGATCATTGGCAAATTCTTGAAGAAATATTGCCCCTCCTCACTCGCTGATAAATGGTTTCCTTTTCTTTGCAACTAGATGCTTGTGCTACTGCTAATAACTATCGTTTGCTTATGATTCTCATTCTTTTTAAGGGCCTTTCAGCTGCTTGTCTTTTGATATCTTTACTTCATAATAACTTTCCTGTCGGCTTCCATTCATGGATTGCCACACTGAAAGAGACTAGCGAATTTAAGTTTGAAGAACACTCTTCTTGCAGGTAATGAAGATGGAAGAATAGACCAAAAGGGGCTAGTATTGAAATGTTGCATTCTTTGAGGTATAAAAGGCCAAATATGATAATGTAAATAAACACAGACATTTGATGTTACTATTTAAGCAACATGCTTATGTCTACACGCATATGAATGAAGTTGAGTTGTGTTCCATTAAGTGACATGTTTGTCAGAATATCAATTTTCTTCTTTGCTATTTGCCTAGCCTTCCCTTTTGAACAGCTCATTGATGAGATAGGGTTCCCTTTCAGCTGTTCTTAAAGATCAGCAAAAGAGATAAAAGTGAAATAGACAAATGCAAGTTATGTTAAATAGAAGTCAATCAAAATCTTTGTAGATTCTGTTCCCTACTGACCCTTCCTCTATTGACAGTTATGAACAAAAATGAGAACTTTCTGGCTTTATTCTATCGGTACCATTATTAT

mRNA sequence

GACTGTTCAATTATGCAGTGTTTTTGTTAATCCTCTCTTTCTCTCTCATCTATCTTTTATGACACGCTTTCTCTCTCTACACTTGGGTCTTTAACTTTGGGAACCCTAACTCAGAAACCGAGCTTCAAAAATGGGTGATGAGGCCGCCAAGGTTGTTGTTCCTCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACTATTATTGGGCCACCTAACACTGTCCATGAAGGACGCATCTATCAACTCAAGTTATTTTGTGGACAGGACTATCCTGATAATCCTCCAAATGTTAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGGGTGGTGGAACCAAGCCTTTTCCCCATGCTTGCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGAGTTGGAAAACAGCTTGTTTGCCATCCTGAGGAATCACCATTGCAATCCAGAGGTATCAGAAATCTGAAATACTGCAAAGCTCGGGAACTCCATCCTAATGCTGTCTCTAGTTTAAATATGCCCAGGCACCTAACTGCAAAGGAAGAACTTGACTTCCTTAGGAGTTTAGGCATTCATTTGCAATTGAGTGGGTCAGGTTCAACTCTACATAACCTGGTCTTGGTTGGGTTTAGTGTAGGCCATTCCTGGGTCTGTGCTTCAAAGAGGAAGGGGGTTCTTTTGAAATTGAACTTCTGGCTTTCCTCCTCTAAAAACTTATGGTTTCCTCAGGCTCCAGGTGGCACACCCAAGGGTGACACTTCAGTGTCATCCATCAGAACTCCGTCTGTTAATGGTGACATCATGTGGTCGAATCTGAGAGAAACAGTCCCAGTGGGCTGTAATGAAGATGGAAGAATAGACCAAAAGGGGCTAGTATTGAAATGTTGCATTCTTTGAGGTATAAAAGGCCAAATATGATAATGTAAATAAACACAGACATTTGATGTTACTATTTAAGCAACATGCTTATGTCTACACGCATATGAATGAAGTTGAGTTGTGTTCCATTAAGTGACATGTTTGTCAGAATATCAATTTTCTTCTTTGCTATTTGCCTAGCCTTCCCTTTTGAACAGCTCATTGATGAGATAGGGTTCCCTTTCAGCTGTTCTTAAAGATCAGCAAAAGAGATAAAAGTGAAATAGACAAATGCAAGTTATGTTAAATAGAAGTCAATCAAAATCTTTGTAGATTCTGTTCCCTACTGACCCTTCCTCTATTGACAGTTATGAACAAAAATGAGAACTTTCTGGCTTTATTCTATCGGTACCATTATTAT

Coding sequence (CDS)

ATGGGTGATGAGGCCGCCAAGGTTGTTGTTCCTCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACTATTATTGGGCCACCTAACACTGTCCATGAAGGACGCATCTATCAACTCAAGTTATTTTGTGGACAGGACTATCCTGATAATCCTCCAAATGTTAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGGGTGGTGGAACCAAGCCTTTTCCCCATGCTTGCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGAGTTGGAAAACAGCTTGTTTGCCATCCTGAGGAATCACCATTGCAATCCAGAGGTATCAGAAATCTGAAATACTGCAAAGCTCGGGAACTCCATCCTAATGCTGTCTCTAGTTTAAATATGCCCAGGCACCTAACTGCAAAGGAAGAACTTGACTTCCTTAGGAGTTTAGGCATTCATTTGCAATTGAGTGGGTCAGGTTCAACTCTACATAACCTGGTCTTGGTTGGGTTTAGTGTAGGCCATTCCTGGGTCTGTGCTTCAAAGAGGAAGGGGGTTCTTTTGAAATTGAACTTCTGGCTTTCCTCCTCTAAAAACTTATGGTTTCCTCAGGCTCCAGGTGGCACACCCAAGGGTGACACTTCAGTGTCATCCATCAGAACTCCGTCTGTTAATGGTGACATCATGTGGTCGAATCTGAGAGAAACAGTCCCAGTGGGCTGTAATGAAGATGGAAGAATAGACCAAAAGGGGCTAGTATTGAAATGTTGCATTCTTTGA

Protein sequence

MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGVGKQLVCHPEESPLQSRGIRNLKYCKARELHPNAVSSLNMPRHLTAKEELDFLRSLGIHLQLSGSGSTLHNLVLVGFSVGHSWVCASKRKGVLLKLNFWLSSSKNLWFPQAPGGTPKGDTSVSSIRTPSVNGDIMWSNLRETVPVGCNEDGRIDQKGLVLKCCIL

Homology

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BLAST of ClCG01G006500 vs. NCBI nr
Match: TYK05558.1 (zinc finger protein VAR3 [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 3.6e-83
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGVGKQLVCHPEESPLQSRGIR 162
           MQLKKEMTSPQNRRLSQPSEGVGKQLVC+ EE+  Q +  R
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGVGKQLVCYLEETQFQIQSYR 161

[Close]

BLAST of ClCG01G006500 vs. NCBI nr
Match: KAG6601851.1 (Ubiquitin-conjugating enzyme E2 variant 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301.2 bits (770), Expect = 1.0e-77
Identity = 149/185 (80.54%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGVGKQLVCHPEESPLQ-------SRGIRNLKYCKARELHP 179
           MQLKKEMTSPQNRRLSQPSEGV   L CHP    ++          ++N  Y    EL  
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGV--TLQCHPSGGFMRCLPVVPYMESMKNFNYLSLTELRL 180

[Close]

BLAST of ClCG01G006500 vs. NCBI nr
Match: XP_016903717.1 (PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 6.5e-77
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 565 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 624

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 625 GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 684

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           MQLKKEMTSPQNRRLSQPSEG
Sbjct: 685 MQLKKEMTSPQNRRLSQPSEG 705

[Close]

BLAST of ClCG01G006500 vs. NCBI nr
Match: KAA0046368.1 (zinc finger protein VAR3 [Cucumis melo var. makuwa])

HSP 1 Score: 296.2 bits (757), Expect = 3.2e-76
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSE 141
           MQLKKEMTSPQNRRLSQPSE
Sbjct: 121 MQLKKEMTSPQNRRLSQPSE 140

[Close]

BLAST of ClCG01G006500 vs. NCBI nr
Match: XP_038874959.1 (uncharacterized protein LOC120067474 [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 3.2e-76
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 554 MGDEATKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 613

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 614 GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 673

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           MQLKKEMTSPQNRRL+QPSEG
Sbjct: 674 MQLKKEMTSPQNRRLTQPSEG 694

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BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 114/141 (80.85%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           M  E AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           G+I+QLKLFCG++YP++PP VRFQTRINM CVNPETGVVEPSLFPML NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           ++LKKEM +  NR+L+QP EG
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEG 141

[Close]

BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.5e-63
Identity = 111/141 (78.72%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           G+I+QLKLFCG+DYP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM S QNR+L+QP EG
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEG 141

[Close]

BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-60
Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           +G   + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFC +DYP+ PP VRF +R+NM CVN ETGVV+P  F +LANWQRE+TMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM++  NR+L QP EG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]

BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-58
Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 6   AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQ 65
           + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQ
Sbjct: 7   SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66

Query: 66  LKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKK 125
           LKLFC +DYP+ PP VRF +RINMTCVN +TGVV+   F +LANWQR++TMEDIL QLKK
Sbjct: 67  LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKK 126

Query: 126 EMTSPQNRRLSQPSEG 142
           EM +  NR+L QP EG
Sbjct: 127 EMAASHNRKLVQPPEG 142

[Close]

BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot
Match: Q54D06 (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.5e-41
Identity = 73/132 (55.30%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69
           +PRNF LLEELE GEK  GDGT+SYG++  DDI ++SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 70  CGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 129
           C +DYP+ PP VRF T+IN+ CVN + GVV+P   P+L+NW  ++ +++IL +L++EM+S
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 130 PQNRRLSQPSEG 142
             N++L QP EG
Sbjct: 124 SSNKKLVQPPEG 135

[Close]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL
Match: A0A5D3C2X2 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3042G00070 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.7e-83
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGVGKQLVCHPEESPLQSRGIR 162
           MQLKKEMTSPQNRRLSQPSEGVGKQLVC+ EE+  Q +  R
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGVGKQLVCYLEETQFQIQSYR 161

[Close]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL
Match: A0A1S4E671 (uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 565 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 624

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 625 GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 684

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           MQLKKEMTSPQNRRLSQPSEG
Sbjct: 685 MQLKKEMTSPQNRRLSQPSEG 705

[Close]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL
Match: A0A5A7TU26 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00820 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSE 141
           MQLKKEMTSPQNRRLSQPSE
Sbjct: 121 MQLKKEMTSPQNRRLSQPSE 140

[Close]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL
Match: A0A6J1JNZ0 (ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487038 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           MQLKKEMTSPQNRRLSQPSEG
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEG 141

[Close]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL
Match: A0A6J1JLS9 (ubiquitin-conjugating enzyme E2 variant 1B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487038 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           MQLKKEMTSPQNRRLSQPSEG
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEG 141

[Close]

BLAST of ClCG01G006500 vs. TAIR 10
Match: AT1G23260.1 (MMS ZWEI homologue 1 )

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66
Identity = 114/141 (80.85%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           M  E AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           G+I+QLKLFCG++YP++PP VRFQTRINM CVNPETGVVEPSLFPML NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           ++LKKEM +  NR+L+QP EG
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEG 141

[Close]

BLAST of ClCG01G006500 vs. TAIR 10
Match: AT1G70660.1 (MMS ZWEI homologue 2 )

HSP 1 Score: 241.9 bits (616), Expect = 6.8e-64
Identity = 111/141 (78.72%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           G+I+QLKLFCG+DYP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM S QNR+L+QP EG
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEG 141

[Close]

BLAST of ClCG01G006500 vs. TAIR 10
Match: AT1G70660.2 (MMS ZWEI homologue 2 )

HSP 1 Score: 241.9 bits (616), Expect = 6.8e-64
Identity = 111/141 (78.72%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           G+I+QLKLFCG+DYP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM S QNR+L+QP EG
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEG 141

[Close]

BLAST of ClCG01G006500 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-62
Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 0


Query: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           +G   + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 120
           GRIYQLKLFC +DYP+ PP VRF +R+NM CVN ETGVV+P  F +LANWQRE+TMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM++  NR+L QP EG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]

BLAST of ClCG01G006500 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-61
Identity = 105/135 (77.78%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 7   KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQL 66
           +++VPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +EG+I+QL
Sbjct: 443 ELLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQL 502

Query: 67  KLFCGQDYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKE 126
           KLFCG+DYP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L+QLKKE
Sbjct: 503 KLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKE 562

Query: 127 MTSPQNRRLSQPSEG 142
           M S QNR+L+QP EG
Sbjct: 563 MMSSQNRKLAQPLEG 577

The following BLAST results are available for this feature:

BLAST of ClCG01G006500 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05558.1	3.6e-83	93.79	zinc finger protein VAR3 [Cucumis melo var. makuwa]	[more]
KAG6601851.1	1.0e-77	80.54	Ubiquitin-conjugating enzyme E2 variant 1A, partial [Cucurbita argyrosperma subs...	[more]
XP_016903717.1	6.5e-77	99.29	PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo]	[more]
KAA0046368.1	3.2e-76	99.29	zinc finger protein VAR3 [Cucumis melo var. makuwa]	[more]
XP_038874959.1	3.2e-76	98.58	uncharacterized protein LOC120067474 [Benincasa hispida]	[more]

BLAST of ClCG01G006500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YP0	1.6e-65	80.85	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9CAB6	9.5e-63	78.72	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SVD7	1.2e-60	76.60	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SJ44	1.9e-58	77.94	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q54D06	3.5e-41	55.30	Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=...	[more]

BLAST of ClCG01G006500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2X2	1.7e-83	93.79	Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4E671	3.2e-77	99.29	uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=...	[more]
A0A5A7TU26	1.6e-76	99.29	Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1JNZ0	2.1e-76	98.58	ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1JLS9	2.1e-76	98.58	ubiquitin-conjugating enzyme E2 variant 1B-like isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of ClCG01G006500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23260.1	1.1e-66	80.85	MMS ZWEI homologue 1	[more]
AT1G70660.1	6.8e-64	78.72	MMS ZWEI homologue 2	[more]
AT1G70660.2	6.8e-64	78.72	MMS ZWEI homologue 2	[more]
AT3G52560.1	8.3e-62	76.60	ubiquitin E2 variant 1D-4	[more]
AT1G70650.2	5.4e-61	77.78	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 14..167 e-value: 4.0E-14 score: 62.9
None	No IPR available	PANTHER	PTHR24068:SF344	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE	coord: 8..144
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 8..144
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 2..143 e-value: 1.2E-42 score: 146.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 9..140
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 41..134 e-value: 2.3E-15 score: 56.5
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 11..168 score: 32.600224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G006500.2	ClCG01G006500.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006301	postreplication repair
biological_process	GO:0070534	protein K63-linked ubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding