ClCG01G006190 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAACTTTTTTTTTACCATAAAGAAAAGTATATATTAAATCTATGAAAATGTGGGAAATTAAATGCCATGGTTTGCTTTACATTAAGATAATTAAATAAAGAAAATGTTAAATTTACGGCTGCCGTTACTATATAAACCTCTCTTTCTTCTCTCCAACCAAAACTTGAAGGCTTCCTCTGTATCTCTCTCAAGATCTTCCATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTTGAAGGCGGTGAGGGTCGTGTTTCCAGGCGGCGAGGTCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCAGATTCTCCGCCCTCTCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGAATCGGAATCATCTAGAATCGGAAGCGAGACCGATAATTAGCGATGAAAATGAAGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTCAAGATAGTAAGATTTCAATACATTGAATTGAAACTGAACTTCAATTTTTGTGATCTGATCTGATATGATCTCGATTTTTGAAGAAAATGATGAATTCTCCGGCGGGGCGAACAGATAAAATCCGTTCATCTAAAATTTCATTGTGTGCGGACCAAGCTGAAGTTATTAATGGCGAAACGACGTCGTATTTGCCCTCCCCCTTCTCTTTCTTGTTCATTGGCCTCAAATTCAAACTAAATTACCAATTTACTGTGATTATAAAAAAAAAAAAATAAAAAAAATACGGTTTGGTTTATATAATAACCATATGGTGTGAGGGAAATTCTTTGAGATCATTTCATCTTGCTTTTATTTTTTGTTTTGAGTTATGCATTTTATCTTACTTTACTGGGCCGATAAGTTTTTATTATTATTTATAAATATATTTTAAAAATTAACTAGCTAGAGAAATAAAAATGAAACTAGTTATTTCTCTAACC TAGAAACTTTTTTTTTACCATAAAGAAAAGTATATATTAAATCTATGAAAATGTGGGAAATTAAATGCCATGGTTTGCTTTACATTAAGATAATTAAATAAAGAAAATGTTAAATTTACGGCTGCCGTTACTATATAAACCTCTCTTTCTTCTCTCCAACCAAAACTTGAAGGCTTCCTCTGTATCTCTCTCAAGATCTTCCATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTTGAAGGCGGTGAGGGTCGTGTTTCCAGGCGGCGAGGTCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCAGATTCTCCGCCCTCTCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGAATCGGAATCATCTAGAATCGGAAGCGAGACCGATAATTAGCGATGAAAATGAAGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTCAAGATAGTAAGATTTCAATACATTGAATTGAAACTGAACTTCAATTTTTGTGATCTGATCTGATATGATCTCGATTTTTGAAGAAAATGATGAATTCTCCGGCGGGGCGAACAGATAAAATCCGTTCATCTAAAATTTCATTGTGTGCGGACCAAGCTGAAGTTATTAATGGCGAAACGACGTCGTATTTGCCCTCCCCCTTCTCTTTCTTGTTCATTGGCCTCAAATTCAAACTAAATTACCAATTTACTGTGATTATAAAAAAAAAAAAATAAAAAAAATACGGTTTGGTTTATATAATAACCATATGGTGTGAGGGAAATTCTTTGAGATCATTTCATCTTGCTTTTATTTTTTGTTTTGAGTTATGCATTTTATCTTACTTTACTGGGCCGATAAGTTTTTATTATTATTTATAAATATATTTTAAAAATTAACTAGCTAGAGAAATAAAAATGAAACTAGTTATTTCTCTAACC ATGTTAAATTTACGGCTGCCGTTACTATATAAACCTCTCTTTCTTCTCTCCAACCAAAACTTGAAGGCTTCCTCTGTATCTCTCTCAAGATCTTCCATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTTGAAGGCGGTGAGGGTCGTGTTTCCAGGCGGCGAGGTCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCAGATTCTCCGCCCTCTCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGAATCGGAATCATCTAGAATCGGAAGCGAGACCGATAATTAGCGATGAAAATGAAGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTCAAGATAG MLNLRLPLLYKPLFLLSNQNLKASSVSLSRSSMGNYISCALATPLIKNLKAVRVVFPGGEVRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALSADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHENRNHLESEARPIISDENEGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRSR Homology
BLAST of ClCG01G006190 vs. NCBI nr
Match: XP_008467138.1 (PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo]) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80 Identity = 160/174 (91.95%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of ClCG01G006190 vs. NCBI nr
Match: XP_038875190.1 (uncharacterized protein LOC120067712 [Benincasa hispida]) HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80 Identity = 163/178 (91.57%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of ClCG01G006190 vs. NCBI nr
Match: XP_023521532.1 (uncharacterized protein LOC111785350 [Cucurbita pepo subsp. pepo] >XP_023522109.1 uncharacterized protein LOC111785985 [Cucurbita pepo subsp. pepo] >XP_023550633.1 uncharacterized protein LOC111808715 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.1 bits (788), Expect = 5.6e-80 Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of ClCG01G006190 vs. NCBI nr
Match: XP_022993104.1 (uncharacterized protein LOC111489224 [Cucurbita maxima]) HSP 1 Score: 307.8 bits (787), Expect = 7.3e-80 Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of ClCG01G006190 vs. NCBI nr
Match: XP_004150859.1 (uncharacterized protein LOC101213469 [Cucumis sativus] >KGN51501.1 hypothetical protein Csa_008903 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 4.7e-79 Identity = 158/174 (90.80%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of ClCG01G006190 vs. ExPASy TrEMBL
Match: A0A1S3CT06 (uncharacterized protein LOC103504565 OS=Cucumis melo OX=3656 GN=LOC103504565 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 7.1e-81 Identity = 160/174 (91.95%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of ClCG01G006190 vs. ExPASy TrEMBL
Match: A0A6J1JZA3 (uncharacterized protein LOC111489224 OS=Cucurbita maxima OX=3661 GN=LOC111489224 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.5e-80 Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of ClCG01G006190 vs. ExPASy TrEMBL
Match: A0A0A0KUY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571440 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79 Identity = 158/174 (90.80%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of ClCG01G006190 vs. ExPASy TrEMBL
Match: A0A6J1FGE8 (uncharacterized protein LOC111445259 OS=Cucurbita moschata OX=3662 GN=LOC111445259 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 3.0e-79 Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of ClCG01G006190 vs. ExPASy TrEMBL
Match: A0A5A7TYJ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00280 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75 Identity = 151/166 (90.96%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of ClCG01G006190 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 122.1 bits (305), Expect = 5.3e-28 Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
BLAST of ClCG01G006190 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 75/181 (41.44%), Postives = 108/181 (59.67%), Query Frame = 0
BLAST of ClCG01G006190 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of ClCG01G006190 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06 Identity = 23/87 (26.44%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of ClCG01G006190 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05 Identity = 21/86 (24.42%), Postives = 48/86 (55.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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