ClCG01G005860 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G005860
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Nicotinamide adenine dinucleotide transporter 2
Location	CG_Chr01: 6437613 .. 6439373 (-)
RNA-Seq Expression	ClCG01G005860
Synteny	ClCG01G005860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGGTACTCGCCGGAATCCCCGAGTAATGGATGATCATTTTAAAAATATTTTTAACCCTTTCTATAATTAATTAAAAAATAAATATATATATCTGATCTAATATTCTCTGTTCTTTTTAGTATAGTTTTTAATTTTTACTTGAAATAGGGGTGGGGGAAGGATTAAGATCTTAATCAAGGGGGTTTAGGGAAATAATTTGTTATATGGAAATTATGAATAGATTTCCCATGAGTTGGAATTTGCTTATTTTCTGTCAAATTTTACTTTGTGATTAGCTTTATTATTTGTTTAACTTTTCTTTCTTTGAATTTTCAAATCATATATTAATTAGTCAAATTAATTCTATACAATTTGTAGTTCTGGTCCATGTTACAACAAAATCAGCACCAAATTTAAAGCTTAAACCTTGATTTTCTTTAATTGTGTTATTTTAATTTATAAAATTTTGTTCTTAAATTTGTATGGTTAAGTTAGAGTTAACAAGTCCTTCCTAAACAAATCTTTGACCCCACTTTGACCATAGTCAAGATTAGTCAGTTAAATTTGAGTTAACAAATATACTAATGGCCTATCTCAATTATTGTTTTCAGTTGATATAAGTCCCAAAATTTGATTGTAGTCCAAATTGATTAAATTATTGATTTGAGTGTGACATGCAAATATGAAAATCAGCCAGAGATGGACATAGGAATATACTTCTTTCTTATATGTATATATATTTTATAGATTCTTGCCTGCAATGGTTAAGAGTAGTGGTCTACATGTGACTTGGATTTTTCATTTGTGGAGGGACCTCTTTTTTCCCTTTATTCCATGGAGAGATCTTTTTAAGACTTAAAAACTCAATTTTACATTGACAAATGCTTGAGTGCATACGTAAACTCACTCGATGTCAAATAATAGTTGATCCGTTGTCAAATAATAGTTGTCATGTGGCAAATTCTTTTTCTTATTTTATTTTTTGGATTGCATAAAGATAGTTACAGCTCAAGATGCACCAAGTATTATTCTTCTATTATTTACTGGACTTCCAAACCCATAAATTTGACACCTTTCTCGTTATGTTTTGATTATAGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTCGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCACTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGACCCCGCGCATGGGGTACCATGGGTGTTATGTGGACTAA

mRNA sequence

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTCGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCACTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGACCCCGCGCATGGGGTACCATGGGTGTTATGTGGACTAA

Coding sequence (CDS)

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTCGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCACTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGACCCCGCGCATGGGGTACCATGGGTGTTATGTGGACTAA

Protein sequence

MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPKMTTNACIYTFWPVCCTCGTLTGLSLGHSLTSRMHCRVRVPCVRSRPPNASTRMHAHSTPFAHKHERWWVCMTPRMGYHGCYVD

Homology

[Close]

BLAST of ClCG01G005860 vs. NCBI nr
Match: XP_038875200.1 (uncharacterized protein LOC120067717 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 3.7e-69
Identity = 132/144 (91.67%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSP RRALPEK
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPHRRALPEK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHK+ SRSNTLKDLFVSSPPYV TDGD+HET VAAP+R+ T VCKEKE GEVGSAGW
Sbjct: 61  KRDDHKELSRSNTLKDLFVSSPPYVATDGDIHETAVAAPTRDATTVCKEKEDGEVGSAGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           NPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 NPGSPRPGWTGFRYKYLLRKTWRP 144

[Close]

BLAST of ClCG01G005860 vs. NCBI nr
Match: XP_011655483.1 (uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical protein Csa_008562 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 2.8e-64
Identity = 129/146 (88.36%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V AP+RNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 145
           GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 146

[Close]

BLAST of ClCG01G005860 vs. NCBI nr
Match: KAG7032525.1 (hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.4 bits (646), Expect = 1.8e-63
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 143

[Close]

BLAST of ClCG01G005860 vs. NCBI nr
Match: XP_008467191.1 (PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncharacterized protein E5676_scaffold1728G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 252.3 bits (643), Expect = 4.0e-63
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V AP++N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of ClCG01G005860 vs. NCBI nr
Match: KAG6601820.1 (hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.1 bits (640), Expect = 8.9e-63
Identity = 122/144 (84.72%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NS RRSPRR ALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRSALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 143

[Close]

BLAST of ClCG01G005860 vs. ExPASy TrEMBL
Match: A0A0A0KPK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64
Identity = 129/146 (88.36%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V AP+RNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 145
           GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 146

[Close]

BLAST of ClCG01G005860 vs. ExPASy TrEMBL
Match: A0A5D3BMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00090 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.9e-63
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V AP++N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of ClCG01G005860 vs. ExPASy TrEMBL
Match: A0A1S3CSY3 (uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.9e-63
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V AP++N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of ClCG01G005860 vs. ExPASy TrEMBL
Match: A0A6J1HGM7 (uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC111463373 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-62
Identity = 121/148 (81.76%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G   W
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTSW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
           +PGSPRPGWTGFR+KYLLRKTWRP + +
Sbjct: 121 HPGSPRPGWTGFRHKYLLRKTWRPLLAS 147

[Close]

BLAST of ClCG01G005860 vs. ExPASy TrEMBL
Match: A0A6J1I9M9 (uncharacterized protein LOC111470493 OS=Cucurbita maxima OX=3661 GN=LOC111470493 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59
Identity = 119/144 (82.64%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT    R S RRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT----RNSARRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 139

[Close]

BLAST of ClCG01G005860 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-14
Identity = 61/151 (40.40%), Postives = 75/151 (49.67%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRAL 60
           MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+L     SP RR  
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQLRRKKTTLKMLLSL----ASPSRREQ 60

Query: 61  PEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGS 120
                  HKD +    LKDLFVSS      +    +      ++         +      
Sbjct: 61  QPLIHHHHKDVA-GRKLKDLFVSSSS--AEEEQEEDERPKGKTKEEVLAAMAAKLNAASR 120

Query: 121 AGWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
                    P W GF  K LL++ WRPK+ T
Sbjct: 121 LQCESADAAPVWFGFS-KRLLQRAWRPKLGT 143

[Close]

BLAST of ClCG01G005860 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 69/159 (43.40%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 3   SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGR-RSPR-RRALPE 62
           SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLT +S R R P  +  + E
Sbjct: 2   SLQKFKLLATHCSTVAESPT----RSPVIHLRRRK-TLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  KKRDDHKDFSRSN-TLKDLFVSSPPYV----GTDGDVHETTVAAPSRN--VTPVCKEKEY 122
            K+ D +   RS+  L DLFVSSPP+     G  GD          R+  V  V     +
Sbjct: 62  SKKTDKRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMERDVPVNGVSNNAGF 121

Query: 123 GEVGSA---GWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
           GE  +A   G+N GS RP  +      LLR++WRP + T
Sbjct: 122 GEEITARRVGFN-GSVRPMSSVTLRCRLLRRSWRPVLVT 154

[Close]

BLAST of ClCG01G005860 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 62/173 (35.84%), Postives = 82/173 (47.40%), Query Frame = 0


Query: 1   MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNS-GRRSPRRR 60
           ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML   +S  RR   R+
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRRK-TLRMLFDKSSDSRRRNLRQ 62

Query: 61  ALPE----------KKRDDHKDFSRSNTLKDLFVS--SPPYVG---TDGDVHETTVAAPS 120
            L E          KKR +H+   R   L++L V+  SPPY G    DG   E +  +P 
Sbjct: 63  ILEESPESDGNSGNKKRGNHRATRRK--LRELLVTSPSPPYKGREDIDGIGEERSEISP- 122

Query: 121 RNVTPVCKEKE-----YGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
            NVT     +E     +G  GS              FR + +LRK WRP + +
Sbjct: 123 LNVTSNGDGRELTARRFGSSGSV-----------QSFRLR-ILRKPWRPVLVS 159

The following BLAST results are available for this feature:

BLAST of ClCG01G005860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875200.1	3.7e-69	91.67	uncharacterized protein LOC120067717 [Benincasa hispida]	[more]
XP_011655483.1	2.8e-64	88.36	uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical ...	[more]
KAG7032525.1	1.8e-63	85.42	hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008467191.1	4.0e-63	89.19	PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncha...	[more]
KAG6601820.1	8.9e-63	84.72	hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG01G005860 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG01G005860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPK6	1.3e-64	88.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1	[more]
A0A5D3BMD8	1.9e-63	89.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSY3	1.9e-63	89.19	uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=...	[more]
A0A6J1HGM7	1.3e-62	81.76	uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1I9M9	1.3e-59	82.64	uncharacterized protein LOC111470493 OS=Cucurbita maxima OX=3661 GN=LOC111470493...	[more]

BLAST of ClCG01G005860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68430.1	4.8e-14	40.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G66890.1	1.5e-12	43.40	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	3.3e-07	35.84	50S ribosomal protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..68
None	No IPR available	PANTHER	PTHR34542:SF1	OS08G0359900 PROTEIN	coord: 1..148
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G005860.2	ClCG01G005860.2	mRNA