ClCG01G004405 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G004405
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	stress-induced protein KIN2-like
Location	CG_Chr01: 4675134 .. 4675423 (+)
RNA-Seq Expression	ClCG01G004405
Synteny	ClCG01G004405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATAACTCTCAAAATATGAGCTATCACATTGGAGAAGCTAAAGGCCAAGCACAGGTTTACTTAATTACTTCCATAGTCATTTTATCTTTTGAAATTAAGGAGTGTTTGGTAACATATTGATTTATTGTGTGATTATGTAGGAAAAGGCAAGCAATTTGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCAGTGCAGGACGCAGGACAACAATTAAAGGCTAAAGCACAGGATGCAACTGACGCAGTCAAAGATGCCATAGGCATGAACAAATAA

mRNA sequence

ATGGCAGATAACTCTCAAAATATGAGCTATCACATTGGAGAAGCTAAAGGCCAAGCACAGGAAAAGGCAAGCAATTTGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCAGTGCAGGACGCAGGACAACAATTAAAGGCTAAAGCACAGGATGCAACTGACGCAGTCAAAGATGCCATAGGCATGAACAAATAA

Coding sequence (CDS)

ATGGCAGATAACTCTCAAAATATGAGCTATCACATTGGAGAAGCTAAAGGCCAAGCACAGGAAAAGGCAAGCAATTTGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCAGTGCAGGACGCAGGACAACAATTAAAGGCTAAAGCACAGGATGCAACTGACGCAGTCAAAGATGCCATAGGCATGAACAAATAA

Protein sequence

MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVKDAIGMNK

Homology

[Close]

BLAST of ClCG01G004405 vs. NCBI nr
Match: XP_038876189.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYHIGE KGQAQEKASNLMDKA DAAQS KESVQ+AGQQ+KAKAQDAT+AVK
Sbjct: 1  MADNSQKMSYHIGETKGQAQEKASNLMDKAGDAAQSVKESVQEAGQQIKAKAQDATNAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYH GEAKGQAQEKASN+MDKASDAAQSAKESVQ+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 8.0e-20
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYH+GEAKGQAQEKASN+MDKASD AQSAKES+Q+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQNMSY IGEAKGQAQEKASN+M+KASDAAQSAKES+Q+ GQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-19
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNS+ MSYHIGEAKGQAQEKASNLMDKA D AQSAKES+Q+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          M++ ++N ++  G+A G+A+EK++ L+DKA DAA +A  S Q AG+ +   A    + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DAIGMNK 68
          D  G+NK
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYH GEAKGQAQEKASN+MDKASDAAQSAKESVQ+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYH+GEAKGQAQEKASN+MDKASD AQSAKES+Q+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQ MSYH+GEAKGQAQEKASN+MDKASD AQSAKES+Q+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL
Match: A0A0A0KPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-20
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNSQNMSY IGEAKGQAQEKASN+M+KASDAAQSAKES+Q+ GQQ+KAKAQ A DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          MADNS+ MSYHIGEAKGQAQEKASNLMDKA D AQSAKES+Q+AGQQ+KAKAQ A DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 84.7 bits (208), Expect = 3.0e-17
Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          M+ NSQN+S+  G+AKGQ QEKAS +MDKAS+AAQSAKES+++ GQQ+K KAQ AT++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DAIGMNK 68
          +A GMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of ClCG01G004405 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 43/67 (64.18%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          M++NSQ+MS++ G+AKGQ QEKASNL+DKAS+AAQSAKES+Q+ GQQLK KAQ A++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DAIGMNK 68
          +  G++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of ClCG01G004405 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 73.9 bits (180), Expect = 5.3e-14
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 3  DNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVKDA 62
          DN QN SY  G+A GQ +EKA  +MDKA DAA SA++S+Q  GQQ+K KAQ A D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 IGMNK 68
           GMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of ClCG01G004405 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 43.9 bits (102), Expect = 5.9e-05
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          M++ ++N ++  G+A G+A+EK++ L+DKA DAA +A  S Q AG+ +   A    + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DAIGMNK 68
          D  G+NK
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of ClCG01G004405 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 40.4 bits (93), Expect = 6.5e-04
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 1  MADNSQNMSYHIGEAKGQAQEKASNLMDKASDAAQSAKESVQDAGQQLKAKAQDATDAVK 60
          M++ ++N ++  G+  G+A+EK++ L+DKA DAA  A    Q AG+ +   A    + VK
Sbjct: 1  MSETNKN-AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVK 60

Query: 61 DAIGMNK 68
          D  G+NK
Sbjct: 61 DKTGLNK 66

The following BLAST results are available for this feature:

BLAST of ClCG01G004405 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876189.1	2.1e-20	88.06	stress-induced protein KIN2-like [Benincasa hispida]	[more]
XP_022159706.1	4.7e-20	88.06	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_008437025.1	8.0e-20	85.07	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_004152386.1	1.8e-19	85.07	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]
XP_004152387.1	2.3e-19	85.07	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]

BLAST of ClCG01G004405 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	8.3e-04	40.30	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]

BLAST of ClCG01G004405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4Q8	2.3e-20	88.06	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A5A7TJP0	3.9e-20	85.07	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	3.9e-20	85.07	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A0A0KPD4	8.6e-20	85.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1	[more]
A0A0A0KRE1	1.1e-19	85.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]

BLAST of ClCG01G004405 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	3.0e-17	67.16	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	1.5e-16	64.18	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	5.3e-14	61.54	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	5.9e-05	40.30	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	6.5e-04	37.31	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 1..65 e-value: 9.0E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G004405.1	ClCG01G004405.1	mRNA