ClCG01G004402 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G004402
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	stress-induced protein KIN2-like
Location	CG_Chr01: 4673648 .. 4674065 (-)
RNA-Seq Expression	ClCG01G004402
Synteny	ClCG01G004402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGTTTGCTTTTATTATCATTATTATTTATATTTAGCTATATCATTGTTTTTTTAAAGGGTTTAATTTTAAAACTTTACATTCTTTTAATGAAATGAGTGGTTTGGATTGGATATACAGTATGGTAGTATTCCTGAAAGTACTTGATATTTATTTCTTCTTCCAAGATTATATTAAGGAGTGAATTGGTAATATATTGATCTGTGTGATTATGTAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA

mRNA sequence

ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA

Coding sequence (CDS)

ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA

Protein sequence

MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATGMNK

Homology

[Close]

BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYHVGEAKGQAQEKASN+MDKASD AQSAKESMQEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYH GEAKGQAQEKASN+MDKASDAAQSAKESMQEAGQQ+KAKAQ  AD VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYH GEAKGQAQEKASN+MDKASDAAQSAKES+QEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 5.5e-21
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNS+KMSYH+GEAKGQAQEKASNLMDKA D AQSAKESMQEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_038876189.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYH+GE KGQAQEKASNLMDKA DAAQS KES+QEAGQQIKAKAQDA + VK
Sbjct: 1  MADNSQKMSYHIGETKGQAQEKASNLMDKAGDAAQSVKESVQEAGQQIKAKAQDATNAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.5e-05
Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 5  SQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATG 64
          + K ++  G+A G+A+EK++ L+DKA DAA +A  S Q+AG+ I   A    + VKD TG
Sbjct: 4  TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of ClCG01G004402 vs. ExPASy Swiss-Prot
Match: P18612 (Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 5  SQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATG 64
          + K ++  G+  G+A+EK++ L+DKA DAA  A    Q+AG+ +   A    + VKD TG
Sbjct: 4  TNKNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.4e-22
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYHVGEAKGQAQEKASN+MDKASD AQSAKESMQEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.4e-22
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYHVGEAKGQAQEKASN+MDKASD AQSAKESMQEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYH GEAKGQAQEKASN+MDKASDAAQSAKES+QEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNSQKMSYH GEAKGQAQEKASN+MDKASDAAQSAKESMQEAGQQ+KAKAQ  AD VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          MADNS+KMSYH+GEAKGQAQEKASNLMDKA D AQSAKESMQEAGQQ+KAKAQ AAD VK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          M+ NSQ +S+  G+AKGQ QEKAS +MDKAS+AAQSAKES++E GQQIK KAQ A + VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17
Identity = 44/67 (65.67%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVK 60
          M++NSQ MS++ G+AKGQ QEKASNL+DKAS+AAQSAKES+QE GQQ+K KAQ A++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of ClCG01G004402 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-15
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 3  DNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDA 62
          DN Q  SY  G+A GQ +EKA  +MDKA DAA SA++S+Q+ GQQ+K KAQ AADVVKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06
Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 5  SQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATG 64
          + K ++  G+A G+A+EK++ L+DKA DAA +A  S Q+AG+ I   A    + VKD TG
Sbjct: 4  TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 43.9 bits (102), Expect = 5.9e-05
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 5  SQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATG 64
          + K ++  G+  G+A+EK++ L+DKA DAA  A    Q+AG+ +   A    + VKD TG
Sbjct: 4  TNKNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

The following BLAST results are available for this feature:

BLAST of ClCG01G004402 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437025.1	1.1e-21	92.54	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159716.1	1.9e-21	91.04	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159706.1	1.9e-21	91.04	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_004152387.1	5.5e-21	89.55	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]
XP_038876189.1	1.6e-20	88.06	stress-induced protein KIN2-like [Benincasa hispida]	[more]

BLAST of ClCG01G004402 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	7.5e-05	44.44	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]
P18612	8.3e-04	39.68	Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1	[more]

BLAST of ClCG01G004402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJP0	5.4e-22	92.54	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	5.4e-22	92.54	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A6J1E4Q8	9.2e-22	91.04	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6J1E4S0	9.2e-22	91.04	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]
A0A0A0KRE1	2.7e-21	89.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]

BLAST of ClCG01G004402 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	6.7e-17	68.66	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	6.7e-17	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	4.8e-15	64.62	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	5.4e-06	44.44	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	5.9e-05	39.68	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 1..65 e-value: 1.3E-6 score: 30.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G004402.1	ClCG01G004402.1	mRNA