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ClCG01G004402 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGTTTGCTTTTATTATCATTATTATTTATATTTAGCTATATCATTGTTTTTTTAAAGGGTTTAATTTTAAAACTTTACATTCTTTTAATGAAATGAGTGGTTTGGATTGGATATACAGTATGGTAGTATTCCTGAAAGTACTTGATATTTATTTCTTCTTCCAAGATTATATTAAGGAGTGAATTGGTAATATATTGATCTGTGTGATTATGTAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA ATGGCAGACAACTCTCAAAAGATGAGCTACCACGTCGGAGAAGCCAAAGGCCAAGCACAGGAGAAAGCAAGCAATCTAATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCAATGCAAGAAGCAGGACAACAGATAAAGGCTAAGGCACAGGACGCAGCTGATGTTGTCAAGGATGCCACAGGAATGAACAAATAA MADNSQKMSYHVGEAKGQAQEKASNLMDKASDAAQSAKESMQEAGQQIKAKAQDAADVVKDATGMNK Homology
BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21 Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21 Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus]) HSP 1 Score: 110.5 bits (275), Expect = 5.5e-21 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of ClCG01G004402 vs. NCBI nr
Match: XP_038876189.1 (stress-induced protein KIN2-like [Benincasa hispida]) HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20 Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 7.5e-05 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy Swiss-Prot
Match: P18612 (Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.4e-22 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.4e-22 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22 Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22 Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of ClCG01G004402 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17 Identity = 44/67 (65.67%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of ClCG01G004402 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 77.4 bits (189), Expect = 4.8e-15 Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) ) HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of ClCG01G004402 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) ) HSP 1 Score: 43.9 bits (102), Expect = 5.9e-05 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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