ClCG01G004210 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G004210
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	3-isopropylmalate dehydratase small subunit 3-like
Location	CG_Chr01: 4525467 .. 4528186 (+)
RNA-Seq Expression	ClCG01G004210
Synteny	ClCG01G004210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAGACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGTATGATTCCAAGCCAAACGAAGTGAAGTTGAATTTAAGTTTTTTGGGTTCGTTAGAATTCATTGTCGTTTTGTTTGTTAAGTTATTTCTTTGCTTGCTACTGAGCTTAGAATTCCATAGAAGTGTCTGTCTTGGTAATGTGTATTAATGAATTAATAATTCAGACTGAATTAAGGAAGCAAAAATGATTGCTTTTGGAGTTGAAGTCTGAGATGAGTCTTGCATTTTAGCCGTAGCTTCTTTAGGAGCAGGCGTTATGTCATAATTTTATTACAAGTTATGGAAAATTTGATCTTTGGATGTCATATTGTTCAGTATTTGGAACCTCCTGCTGGGGTTTTTATTCTTGTTATGTCAATGGATATCTCTTCATTTTTCACCAATAGTATGATATCGTCTGAAAGGTTTAAACCCACATAGTTTTGCATTTAAGATTTCATCTGAAAGGTCTCTTACCAAGGAAGATGTTGTACTTGTATATTTGGGACCCTCTCCACTTTTAAACAATGTGGACTTTGTTCACATTCCTAATAATTGGGAGTATGTACACTTTTTGCTGGTTGTAGATGATTTGATGTTGACTCTTAGAGTTTTGAATTTTTATGTGATTTCAATCTGAATGAAGTATTGTAATGTAATTAATTTTTGGCACTAATCAGTCCTAGGGCCCCAATAGTCTGAATTATTGAGTGGCAGCCTCAACTGTAGCTAATAAATTTGAGACTGAGACCAAGTCTGTGGTTGTCTTGTTTATATTTCAATAAGCAATTATGCACTTGTTCATATTCCTATAGCATGGAAAATATAATTGTTAGATTTTCAAATCATTTATCAACTTTGTTCCTGGCAAGGCAATGTACTCTGCATCAAGAAATCGTGTATTGATGGGTTCTATTATGTTGAATCATTTTGCTTTTTGGCAACTGGAGTCTCTAAGAATTAGCTTTCTAGTTCTGAACTTGCTCTTTCTAACAAATTGCTAACCATTCCTCTAGCTCCATGAGAGATAAACTAGTGCCCTGATCAAATTGTGGCTCATACGATACCATTTACATTGGCAGAGGTCTTTTGTTGCAAGTGGGGCTCGATAGCGACTGGCACTCCTTGTTGGAGGAGGTGCTTCTGCATCCTTCCTTTTGGATGAAGGGCTATGTGGTGTGGCATGTGAGTTTCTTCATAGGGTGCTTGGCTTGAGAGGAATAGTAGGATCTTTAGGGATTTTGAGTAATCTAGGGAGAAAGTTTGGGAGTTCCCGAGTTGGTTAGGTTTAATGCTTCTTTTTAGGTGTCGAGACTAGACGTTTTATAATTATGACATTAGTCTTGTTCTTTTGGATTGGAGTCTTTTTCGTATTTAGTGCCAGACTCCTGTTTTTTTCTTTTCTTTTTAGGAGCTTGGTTTTTTGTTTGCCAGAATTATATATATATAACACAATAACAACAATAAGTTTATTATTTCATAACTTGGAGCATCCTACATATGGGTCCTTAGAGCTATGGAATGCTAATTTTCTGTGTACCACTAAGGGAATTTTTAGCCACCAATGGACTTCTCTCATCTGAGGTTTCTTATTGGTTAGAATATATTTGCCTTTGAGTCTGCTTTTGTGAAGGTCTGTATTATGTTGGGAGTCAATGACATCCTCTTCCTCACCTGGAATTAATCTCCAATTGCAGATCAAGAATTTTCTTGACACTCTTGAAGGAATCTCATATTTTCTATCCCCCAGACTCTTATTTTGAGATAATGTGGTCCAATTGATAAGTTTCTTGAGTCATATGTTACATCCATTCTTTAATGATATCCAGGAAGATTGGGGATTAGAGAACTTTCATGA

mRNA sequence

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAGACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGAAGATTGGGGATTAGAGAACTTTCATGA

Coding sequence (CDS)

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAGACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGAAGATTGGGGATTAGAGAACTTTCATGA

Protein sequence

MKPILWSLVKVFSLGLRILPKLITIYDIQHQKASPFDLTFSRPETTMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGRLGIRELS

Homology

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: XP_038876127.1 (3-isopropylmalate dehydratase small subunit 1-like [Benincasa hispida])

HSP 1 Score: 501.9 bits (1291), Expect = 3.9e-138
Identity = 256/274 (93.43%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 24  TIYDIQHQKASPFDLTFSRPETTMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSP 83
           T YDI+HQK +PFDLTFSRPETTMAASLFLSQSPIAT TPRSSPSIS L SPQTIKFPSP
Sbjct: 11  TNYDIKHQKETPFDLTFSRPETTMAASLFLSQSPIATPTPRSSPSISFLSSPQTIKFPSP 70

Query: 84  HSNFRNDLSIAISHAPPRAATIIPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAE 143
           HS+F  DLSIA+SHAPPRAATIIPRATASPSS APSTTAFHGRCYVVGDNIDTDQIIPAE
Sbjct: 71  HSSFLFDLSIAVSHAPPRAATIIPRATASPSSTAPSTTAFHGRCYVVGDNIDTDQIIPAE 130

Query: 144 YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAP 203
           YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAP
Sbjct: 131 YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAP 190

Query: 204 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLIN 263
           VALGASGAVAVVAESYARIFFRNSVATGEIYPLESE RICDECKTGDVVTIELG+SRLIN
Sbjct: 191 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESETRICDECKTGDVVTIELGKSRLIN 250

Query: 264 HTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGRL 298
           HTTGKEYKLKPIGDAGPVIEAGGIFAYARKTG +
Sbjct: 251 HTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 284

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: XP_008437054.1 (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo] >KAA0039730.1 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 446.4 bits (1147), Expect = 1.9e-121
Identity = 230/251 (91.63%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARKTGRL 298
           IFAYARKTG +
Sbjct: 241 IFAYARKTGMI 251

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: XP_004152394.1 (3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus] >KGN50272.1 hypothetical protein Csa_000662 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-116
Identity = 225/251 (89.64%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARKTGRL 298
           IFAYARKTG +
Sbjct: 241 IFAYARKTGMI 246

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: XP_023521482.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023533844.1 3-isopropylmalate dehydratase small subunit 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533845.1 3-isopropylmalate dehydratase small subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-116
Identity = 222/252 (88.10%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISLLP  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLLPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARKTGRL 298
           GIFAYARK+G +
Sbjct: 242 GIFAYARKSGMI 253

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: XP_022996177.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 7.1e-116
Identity = 221/252 (87.70%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISL+P  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLIPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARKTGRL 298
           GIFAYARK+G +
Sbjct: 242 GIFAYARKSGMI 253

[Close]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot
Match: Q9ZW85 (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN=SSU1 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.4e-82
Identity = 164/253 (64.82%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

[Close]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot
Match: Q9LYT7 (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN=SSU3 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-75
Identity = 159/252 (63.10%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 52  FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 111
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 112 ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 171
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 172 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 231
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 232 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 291
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 292 GIFAYARKTGRL 298
           GIFAYARK G +
Sbjct: 247 GIFAYARKAGMI 250

[Close]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot
Match: Q9ZW84 (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SSU2 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-72
Identity = 146/244 (59.84%), Postives = 174/244 (71.31%), Query Frame = 0


Query: 63  PRSSPSISLLPSPQTIKFPSPHSNFRNDL-----SIAISHAPPRAATIIPRATASPSSA- 122
           P++ P  S   S     F SP   F         SI+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 123 -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 182
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 183 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 242
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 243 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARK 298
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot
Match: B5YHE5 (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=leuD PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.9e-29
Identity = 78/179 (43.58%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 125 GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 184
           G+ +  GDNIDTD IIPA YL     N S+ ++L  + +    SS+ ++ V+P +     
Sbjct: 5   GKVWKFGDNIDTDAIIPARYL-----NTSDPKELAKHVMEDADSSFPSK-VKPGD----- 64

Query: 185 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 244
            IIIAG NFGCGSSREHAP+A+ ASG  AV+A+SYARIFFRN+   G   P+     + D
Sbjct: 65  -IIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 124

Query: 245 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAYARKTGRLGIREL 303
           E   GD V I++   ++IN T GK+Y  KPI      +I+AGG+  + +K  RL + ++
Sbjct: 125 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK--RLSMEDI 167

[Close]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot
Match: Q9WZ25 (3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=leuD2 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0


Query: 125 GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 184
           G+ +V GDN++TD+IIPA YL     N S+ ++L  Y +      +  R         K 
Sbjct: 7   GKVFVFGDNVNTDEIIPARYL-----NTSDPQELAKYCMEDARPGFGRR------DDIKG 66

Query: 185 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 244
           SII+AG+NFGCGSSREHAPVA+ A+G   V+A+S+ARIFFRN++  G   P+  E++  D
Sbjct: 67  SIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEAD 126

Query: 245 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAYARK 294
           E + GD+  ++L    + N T GKEY+++P  +    ++EAGG   Y  K
Sbjct: 127 EFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162

[Close]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL
Match: A0A5A7T900 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00620 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.3e-122
Identity = 230/251 (91.63%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARKTGRL 298
           IFAYARKTG +
Sbjct: 241 IFAYARKTGMI 251

[Close]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL
Match: A0A1S3AT32 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103482595 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.3e-122
Identity = 230/251 (91.63%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARKTGRL 298
           IFAYARKTG +
Sbjct: 241 IFAYARKTGMI 251

[Close]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL
Match: A0A0A0KPB2 (Aconitase_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165170 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.9e-117
Identity = 225/251 (89.64%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARKTGRL 298
           IFAYARKTG +
Sbjct: 241 IFAYARKTGMI 246

[Close]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL
Match: A0A6J1K176 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491484 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 221/252 (87.70%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISL+P  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLIPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARKTGRL 298
           GIFAYARK+G +
Sbjct: 242 GIFAYARKSGMI 253

[Close]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL
Match: A0A6J1H3H6 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459316 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.5e-116
Identity = 223/252 (88.49%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISLLP PQ+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLLP-PQSIKFPSFHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARKTGRL 298
           GIFAYARK+G +
Sbjct: 242 GIFAYARKSGMI 252

[Close]

BLAST of ClCG01G004210 vs. TAIR 10
Match: AT2G43090.1 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-83
Identity = 164/253 (64.82%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

[Close]

BLAST of ClCG01G004210 vs. TAIR 10
Match: AT3G58990.1 (isopropylmalate isomerase 1 )

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-76
Identity = 159/252 (63.10%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 52  FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 111
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 112 ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 171
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 172 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 231
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 232 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 291
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 292 GIFAYARKTGRL 298
           GIFAYARK G +
Sbjct: 247 GIFAYARKAGMI 250

[Close]

BLAST of ClCG01G004210 vs. TAIR 10
Match: AT2G43100.1 (isopropylmalate isomerase 2 )

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-73
Identity = 146/244 (59.84%), Postives = 174/244 (71.31%), Query Frame = 0


Query: 63  PRSSPSISLLPSPQTIKFPSPHSNFRNDL-----SIAISHAPPRAATIIPRATASPSSA- 122
           P++ P  S   S     F SP   F         SI+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 123 -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 182
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 183 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 242
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 243 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARK 298
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of ClCG01G004210 vs. TAIR 10
Match: AT2G43090.2 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 242.7 bits (618), Expect = 3.9e-64
Identity = 140/253 (55.34%), Postives = 167/253 (66.01%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P                             GA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQP-----------------------------GAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 217

The following BLAST results are available for this feature:

BLAST of ClCG01G004210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876127.1	3.9e-138	93.43	3-isopropylmalate dehydratase small subunit 1-like [Benincasa hispida]	[more]
XP_008437054.1	1.9e-121	91.63	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo] >KA...	[more]
XP_004152394.1	1.4e-116	89.64	3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus] >KGN50272.1 hypo...	[more]
XP_023521482.1	4.1e-116	88.10	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_022996177.1	7.1e-116	87.70	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima]	[more]

BLAST of ClCG01G004210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW85	2.4e-82	64.82	3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYT7	2.2e-75	63.10	3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9ZW84	5.0e-72	59.84	3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
B5YHE5	8.9e-29	43.58	3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii ...	[more]
Q9WZ25	1.3e-27	41.76	3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATC...	[more]

BLAST of ClCG01G004210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T900	9.3e-122	91.63	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3AT32	9.3e-122	91.63	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KPB2	6.9e-117	89.64	Aconitase_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165170...	[more]
A0A6J1K176	3.4e-116	87.70	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H3H6	4.5e-116	88.49	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of ClCG01G004210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43090.1	1.7e-83	64.82	Aconitase/3-isopropylmalate dehydratase protein	[more]
AT3G58990.1	1.5e-76	63.10	isopropylmalate isomerase 1	[more]
AT2G43100.1	3.5e-73	59.84	isopropylmalate isomerase 2	[more]
AT2G43090.2	3.9e-64	55.34	Aconitase/3-isopropylmalate dehydratase protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011827	Hydrolyase LeuD/HacB/DmdB	TIGRFAM	TIGR02087	TIGR02087	coord: 125..293 e-value: 5.1E-36 score: 121.8
IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	PFAM	PF00694	Aconitase_C	coord: 184..236 e-value: 5.6E-17 score: 62.3
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	GENE3D	3.20.19.10	Aconitase, domain 4	coord: 120..297 e-value: 1.3E-42 score: 147.3
None	No IPR available	PANTHER	PTHR43345:SF8	BNAA05G34440D PROTEIN	coord: 62..297
None	No IPR available	PANTHER	PTHR43345	3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED	coord: 62..297
None	No IPR available	SUPERFAMILY	52016	LeuD/IlvD-like	coord: 122..295
IPR033940	3-isopropylmalate dehydratase, swivel domain	CDD	cd01577	IPMI_Swivel	coord: 129..256 e-value: 2.8034E-36 score: 123.468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G004210.2	ClCG01G004210.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043436	oxoacid metabolic process
molecular_function	GO:0016836	hydro-lyase activity