ClCG00G000170 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG00G000170
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTranscription initiation factor TFIID subunit 11
LocationCG_Chr00: 196975 .. 203420 (+)
RNA-Seq ExpressionClCG00G000170
SyntenyClCG00G000170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATATTTTACTTGTCTCCCACTCCGGCGACCCCTTCCCCCATTTTCCTTTTCTATCTCTCTTCGGCGGCCGCCACAAACTACATCAGATCCTTTCTTCTGGTCATTTTCCCTTTTTCCAGAAACCCTAATCAGAGATATCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAGTACGTTCTTTTCCCTCTCTCATATATAGGTTTAAATTTTGTTTTTAATTGATTTTGCTGCTTCAAGATGAGCTAGATTAAAATACTTCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTCTTACTGAAGGGTGTCGGCAGTTGATTGAATGAGTAGACTGTGAACTAGTTCATTATTGAGTTTCTCCAATAGAATATTTAAAATTTACAAATTCCCAATGCCTCTGCCAAATATTTTGCTTTTGAACCTGGTCTAGCTTTTGGATGTTGCTTCCTGATCTTCTTCCAAATTACTAGGTGTTCCCATTAAGATTAGTGCAATAGCCTTTTATTGATTTTCTTCATCAAGAGATTCAAAAGGTTTGCTTCTAGGATTGGCTTATCCAATTTTCCCAATCCTTTTCTGTGAGAAGTCCCCAACCCCATTGGGACAGAAGAGCACAATTCTTATTAGCGAGATTGCTAATACCCAAGCCTCCCATTTCAGTGGGAAGAGAGGTAGTTTCCTAATTAATCATATTAGTGGCCCCAAACTCCTTACTACCTTTTCAAAAGAAGTTTCTAATAAGTTTATCTAGCCAATTGATCACACTGTTGGGACCAGAAAATACAAGAAATAGTAAAAAGGGATGCTAGTAAGAATAGACTTAGCCAAATTAATTCTACCCCCCTCTAGAGAGGAGAAGGTTCTTCCAGTACTCCAACCCTTTTTGGACTTCATCAATGACAGGTTGCAAAAAAGAGGAAGTCTTGGAGTTACCGCCAAGAGGCATGCCCAAGTACTCAAGAGGTTAGATGCTAGCCGCACAACTCCACTCCTGTGCCACTGGTGAAACCTTTGAGTTACAAATATTAAGACCAACCAAGAGAGTTTTATAGAGATAAACTCTGAAGTCCGACATCACCTCAGAACCTACAACAATTTTCTTCAAGTAATTGAACAAGGATAAGTTGTAGTTCAAAAAGAGAAGAGTGTCATCAGCAACTTGCAAATGAGAAATATGAACCTCTCCACCTCTGATTGGAGGCCCTTCAAGAAGTCATCCTTCATTCCTTTGTGGATAAGCCTGCCAAAAGACATACACCACCAACATGAAAAGGAGAGGGGCAAGCATATTGCCTTGCCTAAGCCCTCTAGTAGCTTTGATTTGGCCCCTCGGTCTCCCATTAATCATAATCGAGAAGGAGGTGTTAGTGATACAAGCTTTGATCCAACCAATCCAATGAGCACCGGAGCCTTTATGATTAAACACCTCAAGGAGAAAGTCCTAGCCAACCATATCCAAAGGCCCTCTCAAAAGCCAGCTTGAAAACCAACCCCTCTTCTTTCTATTAATATAATCATAAAAAATCTCCTTAGCAATCAAAATAGGATCAAGAATGTGCCTACCCATGATGAAGGTCGATTGACTGTGCCTGATGGGATGATGTTTAACTTTTTTTAAGCCTTCTGCCTAAGACTTTGGCAATAATCTTGTAGAGAATAGTGGTCAAACTAAGTGGCCTGAAATCAGGTGCTCCAGAGGTTTGAGCCTTTTTTTTTTTTTTTTGTTGTTGTTGTTGTAGTTGTTATGCCTGTAATTTTTGAGGTGAATATGATAGATCATTTTTATTTTGGTATATTTTTGAGTGCACTATGAACAAAACATTATGAAATAATCACTTAGCTTCAGAAAGAATCTTCTTATAACTTGTCTTAACATTTTGCCAGAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTATGAATCTTAAGATTTTCTCATTTCGAAAGACATTATAAATAGCTAGGAAGGATGGGGTGGGAATGCATTCTTCATTCCTGACCCGGGGGAGATTTTACTCTCTGTCTCCATCCCCCATTCTCTCAGGGTCTAAGGTGGTTTTGATGGATGGGCATAGGCTAGCTATTGGTTTGTTCGTTTGTTTGTTTTTTGCTTCAGATGTCAGCTCATCTTGTTTCAATTAACTTGTAAATTGTAGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGGTATGTAGAAACTTTTATGAAACCCAATTCCCTTGTTCATGTAGGACTCAAAAGATGCATTTCTTTTCCTCTGTTCAGTTACTTTAAATGTCAATGTGAAGCATAGACAAAAGAATTTGCATATTTCAACAAATCTGACTTATTTCAATACTTTATTTTGTTTCAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAACCACTCTGTTTAATTTATACTCTTTGCATTAGGAGTTTTTGGTATAAAATTTCAATACTAAAGCTTAGGTAAAACATCTCATATATATCACTGAAGTTTCTAACATATTTTTGTACGAATCGGCTTCTCATTTTACTACACAC

mRNA sequence

CGATATTTTACTTGTCTCCCACTCCGGCGACCCCTTCCCCCATTTTCCTTTTCTATCTCTCTTCGGCGGCCGCCACAAACTACATCAGATCCTTTCTTCTGGTCATTTTCCCTTTTTCCAGAAACCCTAATCAGAGATATCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAACCACTCTGTTTAATTTATACTCTTTGCATTAGGAGTTTTTGGTATAAAATTTCAATACTAAAGCTTAGGTAAAACATCTCATATATATCACTGAAGTTTCTAACATATTTTTGTACGAATCGGCTTCTCATTTTACTACACAC

Coding sequence (CDS)

ATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAA

Protein sequence

MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Homology
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BLAST of ClCG00G000170 vs. NCBI nr
Match: TYK19451.1 (transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 8.2e-106
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. NCBI nr
Match: XP_016900577.1 (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105
Identity = 210/220 (95.45%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. NCBI nr
Match: XP_004147964.1 (transcription initiation factor TFIID subunit 11 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104
Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. NCBI nr
Match: XP_038904708.1 (transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida])

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101
Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQD-GDDDPKSAAVAT 60
           MKQSKDPFEAAFEEQEESPPNSPSA DDLE+PTNVAP  ADAFDLQD GDDD KSAAVAT
Sbjct: 30  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGDDDSKSAAVAT 89

Query: 61  HSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAI 120
           HSA PA++ SMFVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDK MAKMQAI
Sbjct: 90  HSAAPASSTSMFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKNMAKMQAI 149

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVET 180
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVET
Sbjct: 150 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 209

Query: 181 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 210 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 251

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BLAST of ClCG00G000170 vs. NCBI nr
Match: XP_022940909.1 (transcription initiation factor TFIID subunit 11 [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 203/223 (91.03%), Postives = 210/223 (94.17%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A V ADA DL DGDD+PKS AA A
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  THSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P A+T S+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           TARVVMTERNDSG IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match: Q9M565 (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-55
Identity = 129/221 (58.37%), Postives = 156/221 (70.59%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVAT 60
           MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                    S+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match: F4HR03 (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 107/221 (48.42%), Postives = 129/221 (58.37%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MK SKDPFEAA EEQEESP  +                        +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESPVETEQTL--------------------EGDE---------- 91

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                              A  K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

[Close]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match: Q99JX1 (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 75/207 (36.23%), Postives = 115/207 (55.56%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTA 68
           E    E+  + P +  AAD   +P             +DGD D K AA           +
Sbjct: 14  EPGESEETRATPGALVAADTEGIPEETD---------RDGDADLKEAAAEESELKSQDVS 73

Query: 69  SMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTE 128
            +  +   N S    AA K K D ++++E+  +V         D D++ KMQ ++S F+E
Sbjct: 74  DVTAAERENSSLLTPAAKKLKLDIKDKKEKKQKV---------DEDEIQKMQILVSSFSE 133

Query: 129 EQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMT 188
           EQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  
Sbjct: 134 EQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCE 193

Query: 189 ERNDSGPIRPCHLREAYRRLKLEGKIP 212
           +  ++ P++P H+REA RRLK +G+IP
Sbjct: 194 KWGETPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match: Q5U1X0 (Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 74/207 (35.75%), Postives = 114/207 (55.07%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTA 68
           E    E+  + P +P +AD   +P     V         GD D K AA           +
Sbjct: 14  EPGESEETRATPGAPVSADTEGIPEETDQV---------GDADSKEAAAEESELKSQDVS 73

Query: 69  SMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTE 128
            +  +   + S    AA K K D ++++E+  +V         D D++ KMQ ++S F+E
Sbjct: 74  DVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKV---------DEDEIQKMQILVSSFSE 133

Query: 129 EQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMT 188
           EQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  
Sbjct: 134 EQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCE 193

Query: 189 ERNDSGPIRPCHLREAYRRLKLEGKIP 212
           +  +  P++P H+REA RRLK +G+IP
Sbjct: 194 KWGEMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match: Q15544 (Transcription initiation factor TFIID subunit 11 OS=Homo sapiens OX=9606 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18
Identity = 79/208 (37.98%), Postives = 116/208 (55.77%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAA-----VATHSAT 68
           E    ++  + P  P A D     T+  P   D     D D D K AA     + +   +
Sbjct: 14  ETGESDETAAVPGDPGATD-----TDGIPEETDG----DADVDLKEAAAEEGELESQDVS 73

Query: 69  PATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFT 128
             TT     SS  N  AA K K D +E++E+  +V         D D++ KMQ ++S F+
Sbjct: 74  DLTTVEREDSSLLN-PAAKKLKIDTKEKKEKKQKV---------DEDEIQKMQILVSSFS 133

Query: 129 EEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVM 188
           EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V 
Sbjct: 134 EEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVC 193

Query: 189 TERNDSGPIRPCHLREAYRRLKLEGKIP 212
            +  +  P++P H+REA RRLK +G+IP
Sbjct: 194 EKWGEMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match: A0A5D3D798 (Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001040 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.0e-106
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match: A0A1S4DX73 (transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC103490961 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 210/220 (95.45%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match: A0A0A0L5S4 (TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match: A0A6J1FLN4 (transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111446328 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.4e-96
Identity = 203/223 (91.03%), Postives = 210/223 (94.17%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVA 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A V ADA DL DGDD+PKS AA A
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  THSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P A+T S+FVSSSSNVSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           TARVVMTERNDSG IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match: A0A6J1KZI1 (transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111498496 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.9e-95
Identity = 201/224 (89.73%), Postives = 209/224 (93.30%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPK--SAAV 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A   ADA DL DGDDDPK  +AA 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA 60

Query: 61  ATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQ 120
           AT+S  P A+T S+FVSSSSN+SAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQ
Sbjct: 61  ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQ 120

Query: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELV 180
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 181 ETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           ETARVVMTERNDSG IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]
BLAST of ClCG00G000170 vs. TAIR 10
Match: AT4G20280.1 (TBP-associated factor 11 )

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-56
Identity = 129/221 (58.37%), Postives = 156/221 (70.59%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVAT 60
           MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                    S+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]
BLAST of ClCG00G000170 vs. TAIR 10
Match: AT1G20000.1 (TBP-associated factor 11B )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 107/221 (48.42%), Postives = 129/221 (58.37%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MK SKDPFEAA EEQEESP  +                        +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESPVETEQTL--------------------EGDE---------- 91

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                              A  K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

The following BLAST results are available for this feature:
BLAST of ClCG00G000170 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK19451.18.2e-10695.91transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa][more]
XP_016900577.12.4e-10595.45PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo][more]
XP_004147964.13.5e-10494.55transcription initiation factor TFIID subunit 11 [Cucumis sativus][more]
XP_038904708.12.1e-10194.14transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida][more]
XP_022940909.11.3e-9591.03transcription initiation factor TFIID subunit 11 [Cucurbita moschata][more]
BLAST of ClCG00G000170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5653.1e-5558.37Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702... [more]
F4HR031.5e-3848.42Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=370... [more]
Q99JX11.0e-1836.23Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf... [more]
Q5U1X01.0e-1835.75Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 G... [more]
Q155445.1e-1837.98Transcription initiation factor TFIID subunit 11 OS=Homo sapiens OX=9606 GN=TAF1... [more]
BLAST of ClCG00G000170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D7984.0e-10695.91Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S4DX731.2e-10595.45transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A0A0L5S41.7e-10494.55TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=... [more]
A0A6J1FLN46.4e-9691.03transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1KZI11.9e-9589.73transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of ClCG00G000170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G20280.12.2e-5658.37TBP-associated factor 11 [more]
AT1G20000.11.1e-3948.42TBP-associated factor 11B [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 122..211
e-value: 1.0E-31
score: 110.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 122..211
IPR006809TAFII28-like protein domainPFAMPF04719TAFII28coord: 118..203
e-value: 6.4E-32
score: 109.5
IPR006809TAFII28-like protein domainCDDcd08048TAF11coord: 122..205
e-value: 9.76418E-41
score: 132.305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..81
NoneNo IPR availablePANTHERPTHR13218:SF19TAFII28-LIKE PROTEIN-RELATEDcoord: 1..220
IPR045127Transcription initiation factor TFIID subunit 11-likePANTHERPTHR13218TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATEDcoord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG00G000170.1ClCG00G000170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006413 translational initiation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005634 nucleus
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003743 translation initiation factor activity