ChyUNG234420 (gene) Cucumber (hystrix) v1

Overview


Name	ChyUNG234420
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Cytochrome b6
Location	scaffold44_size100468: 76946 .. 77906 (+)
RNA-Seq Expression	ChyUNG234420
Synteny	ChyUNG234420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGATTGCGGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACCGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAGAGAATAGAAATTAGAAATCATAGAATCATAGATTTGTAATTATTTATTTATGATTACTCGGGGGGGGAGAAGAGTATTTCATTGCTGCAAATATGGATTATTGAAAAATAAGACATGTATTTGGATATTTCCCTTCAACTCCACGAAATTTTATTCGTTATTTTTCAATAATAGTTGAAGGGAATTCTTCGAAGAGAAAATGGATTATGGGAGTGTGTGACTTGAACTATTGATTGGGCCGTGTAGATATATGTCTTTTTATCTGCCACATTGGGATTCACAACCAAATGTGTCTTTATTCCAACCACCGCGAAAGCTCCATACAGAGGGTAGGCTGGTTCGCTTGAAGAGAATCTTT

mRNA sequence

GCGATTGCGGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACCGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAGAGAATAGAAATTAGAAATCATAGAATCATAGATTTGTAATTATTTATTTATGATTACTCGGGGGGGGAGAAGAGTATTTCATTGCTGCAAATATGGATTATTGAAAAATAAGACATGTATTTGGATATTTCCCTTCAACTCCACGAAATTTTATTCGTTATTTTTCAATAATAGTTGAAGGGAATTCTTCGAAGAGAAAATGGATTATGGGAGTGTGTGACTTGAACTATTGATTGGGCCGTGTAGATATATGTCTTTTTATCTGCCACATTGGGATTCACAACCAAATGTGTCTTTATTCCAACCACCGCGAAAGCTCCATACAGAGGGTAGGCTGGTTCGCTTGAAGAGAATCTTT

Coding sequence (CDS)

GCGATTGCGGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACCGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAGAGAATAGAAATTAGAAATCATAGAATCATAGATTTGTAATTATTTATTTATGATTACTCGGGGGGGGAGAAGAGTATTTCATTGCTGCAAATATGGATTATTGAAAAATAAGACATGTATTTGGATATTTCCCTTCAACTCCACGAAATTTTATTCGTTATTTTTCAATAATAGTTGAAGGGAATTCTTCGAAGAGAAAATGGATTATGGGAGTGTGTGACTTGAACTATTGATTGGGCCGTGTAGATATATGTCTTTTTATCTGCCACATTGGGATTCACAACCAAATGTGTCTTTATTCCAACCACCGCGAAAGCTCCATACAGAGGGTAGGCTGGTTCGCTTGAAGAGAATCTTT

Protein sequence

AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL*RIEIRNHRIIDL*LFIYDYSGGEKSISLLQIWIIEK*DMYLDISLQLHEILFVIFQ**LKGILRRENGLWECVT*TIDWAV*IYVFLSATLGFTTKCVFIPTTAKAPYRG*AGSLEENLX

Homology

[Close]

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot
Match: A0A365 (Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.1e-98
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot
Match: Q4VZI6 (Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.1e-98
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot
Match: Q0G9I9 (Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.4e-98
Identity = 186/200 (93.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGV+LAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot
Match: Q0G9T2 (Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 9.2e-98
Identity = 186/200 (93.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot
Match: Q68RX7 (Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 9.2e-98
Identity = 186/200 (93.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL
Match: A0A5D2YMJ7 (CYTB_NTER domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G183200v1 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.1e-96
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 20  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 79

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQIGYWAV 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVL VLTASFGVTGYSLPRDQIGYWAV
Sbjct: 80  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLGVLTASFGVTGYSLPRDQIGYWAV 139

Query: 121 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRK 180
           KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRK
Sbjct: 140 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRK 199

Query: 181 QGISGPL 188
           QGISGPL
Sbjct: 200 QGISGPL 206

[Close]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL
Match: A0A5J5QJY0 (CYTB_NTER domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D08G136700v1 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.0e-96
Identity = 182/187 (97.33%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 23  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 82

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQIGYWAV 120
           ANFGWLI+SVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQ+GYWAV
Sbjct: 83  ANFGWLIQSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQVGYWAV 142

Query: 121 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRK 180
           KIVTG+P+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRK
Sbjct: 143 KIVTGIPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRK 202

Query: 181 QGISGPL 188
           QGISGPL
Sbjct: 203 QGISGPL 209

[Close]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL
Match: A0A346QBD9 (Cytochrome b6 OS=Holboellia latifolia OX=41782 GN=petB PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.5e-95
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL
Match: A0A649UJT2 (Cytochrome b6 OS=Ilex asprella OX=185493 GN=petB PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.5e-95
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL
Match: A0A222NMJ1 (Cytochrome b6 OS=Caryopteris mongholica OX=201515 GN=petB PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.5e-95
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. NCBI nr
Match: TYJ27383.1 (hypothetical protein E1A91_A07G183200v1 [Gossypium mustelinum])

HSP 1 Score: 361 bits (927), Expect = 2.71e-123
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 20  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 79

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQIGYWAV 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVL VLTASFGVTGYSLPRDQIGYWAV
Sbjct: 80  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLGVLTASFGVTGYSLPRDQIGYWAV 139

Query: 121 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRK 180
           KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRK
Sbjct: 140 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRK 199

Query: 181 QGISGPL 187
           QGISGPL
Sbjct: 200 QGISGPL 206

[Close]

BLAST of ChyUNG234420 vs. NCBI nr
Match: KAB2017091.1 (hypothetical protein ES319_D08G136700v1 [Gossypium barbadense])

HSP 1 Score: 359 bits (922), Expect = 1.74e-122
Identity = 182/187 (97.33%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 23  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 82

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQIGYWAV 120
           ANFGWLI+SVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQ+GYWAV
Sbjct: 83  ANFGWLIQSVHRWSASMMVLMMILHVFRVYLTGVVLAVLTASFGVTGYSLPRDQVGYWAV 142

Query: 121 KIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRK 180
           KIVTG+P+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRK
Sbjct: 143 KIVTGIPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRK 202

Query: 181 QGISGPL 187
           QGISGPL
Sbjct: 203 QGISGPL 209

[Close]

BLAST of ChyUNG234420 vs. NCBI nr
Match: QDH07773.1 (PetB [Cucumis sativus])

HSP 1 Score: 357 bits (917), Expect = 1.11e-121
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 13  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 72

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG-------------VVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG             VVLAVLTASFGVTG
Sbjct: 73  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 132

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 133 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 192

Query: 181 AVFMLMHFPMIRKQGISGPL 187
           AVFMLMHFPMIRKQGISGPL
Sbjct: 193 AVFMLMHFPMIRKQGISGPL 212

[Close]

BLAST of ChyUNG234420 vs. NCBI nr
Match: ALI90227.1 (PetB, partial [Alsodeiopsis poggei] >ALI90233.1 PetB, partial [Cordia sebestena] >ALI90234.1 PetB, partial [Desmostachys planchoniana] >ALI90235.1 PetB, partial [Discophora guianensis] >ALI90240.1 PetB, partial [Icacina mannii] >ALI90248.1 PetB, partial [Leretia cordata] >ALI90250.1 PetB, partial [Mappianthus iodoides] >ALI90255.1 PetB, partial [Natsiatum herpeticum] >ALI90272.1 PetB, partial [Rhaphiostylis ferruginea] >KAG9460110.1 hypothetical protein H6P81_chloro000042, partial [Aristolochia fimbriata])

HSP 1 Score: 357 bits (917), Expect = 1.15e-121
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 14  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 73

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG-------------VVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG             VVLAVLTASFGVTG
Sbjct: 74  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 133

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 134 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 193

Query: 181 AVFMLMHFPMIRKQGISGPL 187
           AVFMLMHFPMIRKQGISGPL
Sbjct: 194 AVFMLMHFPMIRKQGISGPL 213

[Close]

BLAST of ChyUNG234420 vs. NCBI nr
Match: AYU57831.1 (cytochrome b6 [Carpinus fangiana])

HSP 1 Score: 357 bits (917), Expect = 1.24e-121
Identity = 187/200 (93.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG-------------VVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG             VVLAVLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 187
           AVFMLMHFPMIRKQGISGPL
Sbjct: 196 AVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 349.7 bits (896), Expect = 2.3e-96
Identity = 183/200 (91.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 60
           AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE
Sbjct: 16  AIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE 75

Query: 61  ANFGWLIRSVHRWSASMMVLMMILHVFRVYL-------------TGVVLAVLTASFGVTG 120
           ANFGWLIRSVHRWSASMMVLMMILHVFRVYL             TGVVL VLTASFGVTG
Sbjct: 76  ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTG 135

Query: 121 YSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 180
           YSLP DQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT
Sbjct: 136 YSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLT 195

Query: 181 AVFMLMHFPMIRKQGISGPL 188
           AVFMLMHF MIRKQGISGPL
Sbjct: 196 AVFMLMHFLMIRKQGISGPL 215

[Close]

BLAST of ChyUNG234420 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-24
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 12  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVH 71
           P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H
Sbjct: 29  PSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMH 88

Query: 72  RWSASMMVLMMILHVFR-------------VYLTGVVLAVLTASFGVTGYSLPRDQIGYW 131
              ASM ++++ LH+FR             V+  GVV+ +L       GY LP  Q+ +W
Sbjct: 89  ANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFW 148

Query: 132 AVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMI 188
              ++T +  AIPV+G  +V  L G  SV  +TL RF+SLH  +LP +     L+H   +
Sbjct: 149 GATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGASLLHLAAL 208

[Close]

BLAST of ChyUNG234420 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-24
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 12  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVH 71
           P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H
Sbjct: 29  PSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMH 88

Query: 72  RWSASMMVLMMILHVFR-------------VYLTGVVLAVLTASFGVTGYSLPRDQIGYW 131
              ASM ++++ LH+FR             V+  GVV+ +L       GY LP  Q+ +W
Sbjct: 89  ANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFW 148

Query: 132 AVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMI 188
              ++T +  AIPV+G  +V  L G  SV  +TL RF+SLH  +LP +     L+H   +
Sbjct: 149 GATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGASLLHLAAL 208

The following BLAST results are available for this feature:

BLAST of ChyUNG234420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A365	4.1e-98	93.50	Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1	[more]
Q4VZI6	4.1e-98	93.50	Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1	[more]
Q0G9I9	5.4e-98	93.00	Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1	[more]
Q0G9T2	9.2e-98	93.00	Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1	[more]
Q68RX7	9.2e-98	93.00	Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1	[more]

BLAST of ChyUNG234420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2YMJ7	1.1e-96	98.93	CYTB_NTER domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A0...	[more]
A0A5J5QJY0	4.0e-96	97.33	CYTB_NTER domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D08...	[more]
A0A346QBD9	1.5e-95	93.50	Cytochrome b6 OS=Holboellia latifolia OX=41782 GN=petB PE=3 SV=1	[more]
A0A649UJT2	1.5e-95	93.50	Cytochrome b6 OS=Ilex asprella OX=185493 GN=petB PE=3 SV=1	[more]
A0A222NMJ1	1.5e-95	93.50	Cytochrome b6 OS=Caryopteris mongholica OX=201515 GN=petB PE=3 SV=1	[more]

BLAST of ChyUNG234420 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ27383.1	2.71e-123	98.93	hypothetical protein E1A91_A07G183200v1 [Gossypium mustelinum]	[more]
KAB2017091.1	1.74e-122	97.33	hypothetical protein ES319_D08G136700v1 [Gossypium barbadense]	[more]
QDH07773.1	1.11e-121	93.50	PetB [Cucumis sativus]	[more]
ALI90227.1	1.15e-121	93.50	PetB, partial [Alsodeiopsis poggei] >ALI90233.1 PetB, partial [Cordia sebestena]...	[more]
AYU57831.1	1.24e-121	93.50	cytochrome b6 [Carpinus fangiana]	[more]

BLAST of ChyUNG234420 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00720.1	2.3e-96	91.50	photosynthetic electron transfer B	[more]
AT2G07727.1	1.1e-24	33.33	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	1.1e-24	33.33	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..220 e-value: 5.1E-73 score: 247.8
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 7..182 e-value: 1.3E-72 score: 243.6
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..187 score: 28.633234
IPR005797	Cytochrome b/b6, N-terminal	CDD	cd00284	Cytochrome_b_N	coord: 1..184 e-value: 2.1977E-79 score: 237.651
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 6..187
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 6..187
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 4..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ChyUNG234420.1	ChyUNG234420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity