ChyUNG231300 (gene) Cucumber (hystrix) v1

Overview


Name	ChyUNG231300
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold34_size1410443: 1076651 .. 1077979 (+)
RNA-Seq Expression	ChyUNG231300
Synteny	ChyUNG231300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCAACCATGGCTCTATCCTCCCCCTCTCTTGCCGGAAAGGTGGTGAAACTCACCTCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACTATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTATCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCCGGTGACTATGGCTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTAACTAATAATTAAAAGCAAAGCTTTTCATATTCTTTAATAAGACTTTTTATACATGTAATCTCGTTAAGTCAAGTATTTTGTTTTCGTTTTCTCTTTCAAAATTGAGTTCATAAATATTTATTCTTTTACGTTGTTATCTTTTTTTTTGAGATCAAATTTGAATTTTTTTTTACTTGAAAATTAAATTTAGAGGATGATTTCTTCTTTTAATAGTTTTTTTTTTTTTTTGTAATCTACTCTCTAAACAATACTATTTTCTAAATTTGTCCAAGTTTCTTAAACTAAAAAAATAATATTATTTTTAAAAACTTATTTTTTATTTTTAAATTTGACTCGCAGAGTTTAAATTCTATTTTGAAAAATACAAAATTTATAAGAAAATATACAGAAATTTTAAAGTCTAAACTATCGAAAGGGAGTGTTTAGATATACAACAACTCAAATTGAGTTTGATTTGAACTTAATTCTTGAGTTTCAAACAAATAAATTAGATGATGTTTCCCTTGTTGACTTGGTGGTTTGCTTCAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATATCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

mRNA sequence

ATGGCAGCCTCAACCATGGCTCTATCCTCCCCCTCTCTTGCCGGAAAGGTGGTGAAACTCACCTCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACTATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTATCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCCGGTGACTATGGCTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATATCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

Coding sequence (CDS)

ATGGCAGCCTCAACCATGGCTCTATCCTCCCCCTCTCTTGCCGGAAAGGTGGTGAAACTCACCTCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACTATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTATCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCCGGTGACTATGGCTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATATCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

Protein sequence

MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*

Homology

[Close]

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.0e-141
Identity = 246/264 (93.18%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 2   AASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPL 61
           AAS+MALSSPSLAGK VKL  S+PE+    RV+MRK+ TK VSSGSPWYGPDRVKYLGP 
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLADPVNNNAWAYATNFVPGK 266
           LADHLA PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 7.6e-141
Identity = 238/255 (93.33%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 11  PSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPLSGEPPSYLT 70
           P+LAG+ VKL+ ++PE+ GN++ TMRK+A+KSVSSGSPWYGPDRVKYLGP SGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 266
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.7e-140
Identity = 242/267 (90.64%), Postives = 254/267 (95.13%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSAT--KSVSSGSPWYGPDRVKYL 60
           MAASTMALSSPS AGK VKL+ SS E+ GN +VTMRK+A+  K+VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-139
Identity = 236/265 (89.06%), Postives = 251/265 (94.72%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+ VKL+ S+PE+ GN RV+MRK+  K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-139
Identity = 241/267 (90.26%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKS--VSSGSPWYGPDRVKYL 60
           MA STMALSS + AGK VKL+ SS E+ GN RVTMRK+ATK+   SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL
Match: A0A0A0LX23 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G445860 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGKVVKLT SSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL
Match: A0A5D3DAQ5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00370 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 260/265 (98.11%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL
Match: A0A1S3BAK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 260/265 (98.11%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL
Match: A0A6J1CKT5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012353 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.3e-145
Identity = 255/265 (96.23%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL
Match: A0A6J1CDN4 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010725 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265

Query: 241 NLADHLADPVNNNAWAYATNFVPG 265
           NLADHLADPVNNNAWAYATNFVPG
Sbjct: 266 NLADHLADPVNNNAWAYATNFVPG 289

[Close]

BLAST of ChyUNG231300 vs. NCBI nr
Match: XP_004147416.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN65549.1 hypothetical protein Csa_019882 [Cucumis sativus])

HSP 1 Score: 528 bits (1360), Expect = 4.82e-189
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGKVVKLT SSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0053968.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20653.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 527 bits (1358), Expect = 9.73e-189
Identity = 260/265 (98.11%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 519 bits (1337), Expect = 1.55e-185
Identity = 255/265 (96.23%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKLT SSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. NCBI nr
Match: XP_038877609.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 519 bits (1337), Expect = 1.61e-185
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNS-RVTMRKSATKSVSSGSPWYGPDRVKYLG 60
           MAASTMALSSPSLAGK VKLT SSPEL GN  RV+MRKSA+KS+SSGSPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGGRVSMRKSASKSISSGSPWYGPDRVKYLG 60

Query: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180
           RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWAYATNFVPGK 265
           ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266

[Close]

BLAST of ChyUNG231300 vs. NCBI nr
Match: XP_038882052.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 517 bits (1332), Expect = 8.95e-185
Identity = 253/265 (95.47%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK VKL+ ++PE+ GN RV+MRK+A+KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNTPEIQGNGRVSMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of ChyUNG231300 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 481.5 bits (1238), Expect = 4.4e-136
Identity = 231/266 (86.84%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+L GK VKL+ ++ E+FG  R+TMRK++  +  SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of ChyUNG231300 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-134
Identity = 230/267 (86.14%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK VKL+ ++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           P SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of ChyUNG231300 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-133
Identity = 229/267 (85.77%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK V L+ ++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           P SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of ChyUNG231300 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-133
Identity = 229/267 (85.77%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK V L+ ++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           P SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of ChyUNG231300 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-132
Identity = 230/267 (86.14%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKVVKLTSSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MA+STMALSSP+ AGK VK  +S  ++ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVKPAAS--DVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           P SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of ChyUNG231300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09756	2.0e-141	93.18	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P08221	7.6e-141	93.33	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27495	1.7e-140	90.64	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27493	1.1e-139	89.06	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07369	3.2e-139	90.26	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of ChyUNG231300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX23	1.1e-147	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3DAQ5	1.9e-147	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BAK6	1.9e-147	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CKT5	5.3e-145	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CDN4	2.6e-144	96.21	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of ChyUNG231300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147416.1	4.82e-189	98.11	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN65549...	[more]
XP_008444193.1	9.73e-189	98.11	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022142169.1	1.55e-185	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_038877609.1	1.61e-185	96.62	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_038882052.1	8.95e-185	95.47	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]

BLAST of ChyUNG231300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	4.4e-136	86.84	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	9.2e-134	86.14	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	3.5e-133	85.77	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	3.5e-133	85.77	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	1.7e-132	86.14	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 2.1E-90 score: 304.0
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 2.1E-49 score: 168.1
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ChyUNG231300.1	ChyUNG231300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding