ChyUNG230390 (gene) Cucumber (hystrix) v1

Overview
NameChyUNG230390
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPsbP family
Locationscaffold32_size1584725: 1349442 .. 1356128 (+)
RNA-Seq ExpressionChyUNG230390
SyntenyChyUNG230390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAAGAAAGGATTTCTATCAGTTTCAGACAAGAATGACGGTTACTCATTCGTCTATCCTATTCGGGTGGCAGGTACACTAATTGTTTAGTTTTTATTTTCTCCACTCCTTTACTTTTGCACACAAAATCCACTTTAAATTTATATATTCGGCACAAGATTAAAGTCTTTTTCCTTCCGAGGAATCAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTAGTCAAAGACGTAATTGAACCATTGGAAAGTGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCAAGATTTTGGGCCTCCTCAACAGGTTAGCATTAAACAGTTAGAATAATCAGCAACAGAATAACTCAATTTTGTGTGTACTCTTTTTTCTAAATATTGTTTAAAAAAATACATTTAAAAATCTATTTTGAGTAGTTTTCAAATACTTTTTTTTTAAATAACTTGTTTTCTAAATTAAACACTTGAAGGTTCAGGTAGCAGGTTTGTCATCTTCTCTCTCTATTTAAATTTAAAATTTCTGCTTGATATATTCAGATTGTGTCTCATGATTTTTTATCGGCATGTGATGTATTGTTAATTTTAACTTCTATGTACATTTTTCACCCATGGATGAAGATTTCCATGTTAAAATATATATTTCTGTCGCAATCTTTTTCTACATATTTGATAATTTATTGTTATCATTTCATTTTATTATTATTATTTTCGTGTAGTGAAGTCATATATGCCTTAGGACCCAAGTTCTTGCACAATAAAATTTCAATTCTGTTTTTTATGAGTCATTTGGTATGGGTTCTGAAAAATAACCGTCTCCATAAACTAAAAAATTACAACATAAATGTAAAATATTTATATGCCAAGCTTTTTAATTCACGCTAGCGAATCCTCGAACGTTTTTGATGATATGACCCCAAATACAAACTAAGCTACCTTATTAATAGGGAGGCAGGAAGAAATAATATAAAAGATGGGCAACCATTTAAGGAGGTAAAATACAAGATATATTAAAGAAAACTAACAAAGTACTGAAGAATAAACAAGATTTTTCCTACATTAGTTTTAAACTAGACTTTTTTGTTCAGTTTCAAATTTAAGCAAAAATTTGAGAGTATTCTATCCGATGTGAATATTTTAGTTTTGTTTTTCTGTTTATTCTGCAGAAGTAAGTTTACTTGCTATAAGGCTGCATTATTATTCTTAAACTTATTCTGCAATATTATTCTTTAACACCCCACATTATTGATTTTCAGGCTTTGATAAGCATCCCCCTTGCTTGTTCTTTTCTTCTGCTATTATTTCTTTATCTACCTTTTCTTCTTTTGCTCTCTTTCTTTCATTTCTCTTTTTATCACCTGCGTTTTGATAACGTTACTTTATATCAGTGCCAGATAAAAGGCTTTGTAAAGTCTGGATGTTCATTCAGGAAATACCCACGTTGCCCCCTTTTTAACTTGGTCATAATTCATATTGCACCTTTTTGGAAGTTTTCCACATACGTTTATGTCATAAGTTTTTGGGAATTACAGGAGAAATGGTAGATTATTAACCTCTAATTTGTCCAGGGACAGTTGGAGTTTTCAATAAAGTTTTCTTGATCTTAGTCGAAAAAACAAATTTAACACTGCTCATTTCCTGATGGTTTCGATGCTTGAGGATTCTGTTCAGTAGTAAATGGCAGAAGCAATGATTCATCAACCTATTATTTGTGCTCAATTGACTAAAAAGGGAGTATACAAGGCCACAACTTCCAGAAAGAAGGGGAAAAAAGAGCTGCAACACTTCCTTTTTAATGAGAATCTCAAGAAATATATAGAGAGAGGGAAATTTCTTTTATGATATATATTAAAGGAATATATATGTACCAAACAGTTCAAGGAAGCATGTCTTATATGTGATGGTATAAGACAGTCTAGGTGTTATATCCAGGGTTGAACATCTTACCTGTAAAGCTCAACTTCATGTATTCTTGTATGTTTATGAGATAATATATGCATGTCCGTTTTTGTTTGTGCTTCTCACCTGAAAATAGGACATCGTACATGCCATTTGCTTGAGCTATTTGTCTTTAGGGTACAATCTTAAAGAATCTATTTGTCTCTTTTTGAAAAAGATATGTAATTTTTTCCCAATTAATTGATGAATTTGTACCGGTTATGCCCTTATTCATTGATAGAAGTAGGTATTACTTCTAATTCTGGAGACTCAGTCTTTTGAAAAATCATACGTAAGCACATTAAAATCTATAGTTAATCGTGTTATTGAAATTTTATAAGCATTATTGGTTTCTGATTTTGAGCCAAGGATCAACCATTAAGATTGTGGACAACTTGCATGATGACATATTAGCTGGGAAGCTTAAATCCGGTAGTGAAATAAAGGTAATGAGCTCAAGTTTGCAAATTTTAATTGTTGCTTATTTGAAAGATTGCAACTATTTGATAAAATGTTGCTATGTGAATCCATTTTAACTTAATATTGTTGTATTTTGGTTTAGGTTGTGGAATGCAAGTTTGTATTTGAAGCCAAGTGTCGTCATTGAGTTTCAAGTTTCTTTAGTTGAGTTTGTGTTTCTTGAACTAGAATTGCAGTCATGTGATTTTTGAAATAACATAGTTGGATTGGTTTTGTAATTTTGAAATTATCATATTAGGTTGGGGTTGATAGAACGTAATGTTTTGTATATGACAACATCGAACTAATATGTAAAGTTTTCAAAATGTTCATACACATATGGTGAAATTTTAATATATATATGTTAAAGTTTTGGAATTATACTCATGCATATTTATGAGATTGTTGGACCACACTACAGGAATTACATGGGCAATACATAAAACAAAAATATAACTATAACTAAATTACAATTAAAAAAAAAAATCTGAAATAGGCTTAATGTTTTTTAAATGTCATAAACAAATACATTTTTTACGGCTTTTCAATGTCATTAACAAGTACATTTTTTACATTTTTCAAATGTCATAAATAAGTATATTCTTGACGTTTTTTAAATGTCACAAACAAGTACATTCTTGACGGTTTTTAAATGTCATGAACATTTATACTCTTGACGACTTTTAGCTATAATGAACAATTGAATATTTGACGTTTATAAAACGTCAACGTTCACTATTCTTGACGTTTTATTAACTGTCAAGAACTTCAACTTTCTTAACGCTGACTTTAATGACGATTTTAAAACCGTTAATAATAACAATTCTTGGTACTTAAAAAACGTCAAGAGAGTTTGTTTTCGTAGTAGTGATAATACTTTTGACATAGTATTTTCATCTGCATAAAATTATATTGTAATATTTAGTTACTCTTCAGCAAATTTTGTTGACCGACTTACCTACCCTTGTTTCTCTGAGTAAATTTCAAGTTGAACCATATGGGACACAAGCAGATGCACAGTAACTAAATTGAAAAATTATATGCAAGGCTTACATTCGCATGGTCATTACACTCAATTTCTACTTGAGCCTTCAAAATTGCAAGTTCAAAGCTTTCCTCTTATTCTTGCTCAAACTCTTCCCGTAATTCGTAACAAGTCTATCAAGCTCTCACAGAGTCTCTGTGTCAATACTATCTATGTCTACTTCTATTTCATCATCTTGTTGGAGAAGTTCAAAGTTTCTCTTTCTGATTATCTACTACAACCCACTTCTCCTCTAGTTGAGTTAAAATACACCACAAAACAATATCATATATCCCAAAGCACAAGTCTAGTAACTAACCAATACACACACATATAACCACCATACCAAACATAAACAATAATTGGATTCTTCACAGTTTGGATATTAGTTTCAGACTTCAATTTAACACTTGTGTAGCTCTTACAATTTCAATTACTCCTATATAGTTTTAGCTTTATTTTCAGTTCTGTCTCTATAGTTAATTTAAAACTAACCTCTTCAAATATGTTAATCTAGCTATTGCCGCTAAAAGTCCCAGAAAATGTAATGTTCAAACAAAGGTGGAATTAGTAAAGAGGAGTAATTGACAAAGTTCATAACCATAAAAAGAGAAGATTTGATCATGGTTATAGTTCGGAATGAATAAGTTTTAGGTTAATTGTTAGAAGCATTGAATAAAAAATGCTTAAAAACAGGCCATGCCAAGGTAGAAAAGGTTTCGAAAAACAAAAATTCCTTGAATGGAAGGTGTTATAATACCATATTCTGAAAATATATATTTCAATTATTAACGACTTTTAAGCTCCTTTAACAACTGCAGCGAGGTTCATCCGTCTTAAAAAAGGAGGGGTGGGGGTGGTAATGGGATGATGCAAGGGGGCTGGATACATGGGATAGTTTGAAACTTCTGAATGACTCATTGACTACCAGGAATGATGTAGCTACATGGGATGTGTTGAGTCTTCTAAATGAGTCATTGACTACTAGGAATGAATTAGTTGGATACAATGATCGATTATGTAATTACGTGGATCAGATTTGATTGGAGAATAGGAGGATTAATCCAAGGATCCTGAATCGTTCTCTACGCCTGGTCTCATTACCTCGCGTTTAGACTACTGTATCAACAATATCCGTCCTTGTTGCTCAGGCAGCTAAGCTTTATACGTTCCTTTCAATGCATAAGCCAGCTTCTTATCATCATGTAGCCTCGTACACCCCATGGTGGCCTTGACTCTTTATGTGTACATAAAAGTTATCACCATCTCAAGTAAACAACTAATGGTTTGAAAACCCTTTTATAGTATTGAAATCATAATCATCAAATCAAGCTTGAACTCTTTTATAGAAATTTCTTTTGAAACACTTCTCATTTAAATTCTTCTTTCAAATAAGTAAAGAGAAATCATCAGAAAGTTTTTTTTAACATAAATTCATTTGAGAGAAAACACTCACCACACTTACCAAAGATCCTCCTCTTCCTTCTCCTTTTCGCGGAGACTTCTTGCGAAACAAATCGCAGCACTTAGCAGTTTTCTTTTTCTTCTTCTCGCCAAAGCAAAACAACACCATTTTAGCTTTTTTAATAAAATCTCTTTGCTTACTTAATGACCAAGTCCTCTATTTATAGAACCCTTAAACTAATTTAGTCATGCCTAAACTCTTCTCTGTTCGCCATCTCCTGCTTAAAACTTCACACGTGTAAATTTAATATTTAACTCAGCCATGCTTAAATCCTTAATCTTACATGTTAATCTCTGTTAAATCAGATTTAACATTTTCTTTGCTAGTCCTTTCTTCTCGTCTAACTCCATTCCAGGAATAACTTCAACCACTCAACATAGTTGTCGAAGGTCTTAATGCAATAACTCTTTTTACGGACTACCCAACCTTTTCTCGCGAAGACTTTTTTTCTTGTGAATGTTTAGACTTATAGGTCCTACTGGCAAATTCTTCTTTTCTGAAAACTTCCTCGTGAATTAACTTCGTAATCACAAAAGCTTATACTTAACCATAAAAGATTTTATCCTTAATCCTTTCTGCAGATTGATTCAAACGCAAACTTCTTTTCACGAAATCTTATTTCAAACGTCTCCTTTTATCCAAAACGCAAATTTTTAAAATACTTAACCAAATTTTCCTTCTTATAATCAAATTAGAAATAGGTCTCACAGATAGGACTGAAGTACCAATGATAGTTCAAACTATTAGTTGCACCATATGGTAATGTACTAGAGAACCTGTGCTAGAGGAACATTTCATGAACTGATTAAACCAAGAGATAAAGGCCAATTCAAGCTCTAGGATTAAAATAGACTAGATCTAATGATAGAGATAGAATAGGGAGGAGAATAACAAACTCTAACCTAGATAGGTCAAGGCTAAGTCCACCCATGAGATGATTAACATCCAAGACGTACATATTTGGGTTTGTTCCTAGCTATAGCCTAACCTATTATTGCCTTCGATAGTGAACCCAATAGAAACCTATTGTTAGTAGGATAATGAATAAACACAACACAATCAATAGAGTGATTTAATAAGTTGTCGGAATTGGAGTTTTTGCCTCAAGGGGAAGAGTTCCTTTAATTATGATTAAAAAAATTGCTTCATGTAAAGGATGCAAGAACAAACTGTTGCTCTATTGAGGAGACAATTTAGGAGGTCGCCACCATAGAGCCAAAGACCTAGTGCTTTGAAGGCCAAATCGACAATAATCCTAGAGGATGAGAAGACAATGTAGTTGGTAGGCACCATAGAGCCAGAGTTCGTGCTTTAAAGACAAAATTTGTGGGAAGGACATAGGAGCTATATTAGATATGTGGAGCAACACAACTTCATCTTCAAGGATGCAGTTGAGAGACTATACCAATACGACTACCATATTTAGAGACATACATTATGCAGATATATTGCGAAAAATTAACCATTTGAATGCACAAATCAAAATTAAAAATCAGTTCATTAATTGACACAAAAAATAGTCCATTTACTGCATCTTATCAGGATCAAAATATTCAATTTTCTAGAACTACTAATCATAAACTGTATACAATGAGACTATTAGAAGCACAAGAAGTATGGATAGGTATAGAGATTGAGTAATTAACAAACACCTACGCATGGAGTGCCATCTTTATTGCAATAGTTGAAGGAACTGCTCCATTCTTCCTTTCTATTGCTTCTATTTCCTTTGCAGTCTCCAGATTTTGAGGATATGGTATCCCTACATACAAAGAGAGAGAACAACAGAGAATAA

mRNA sequence

AAACAAAGAAAGGATTTCTATCAGTTTCAGACAAGAATGACGGTTACTCATTCGTCTATCCTATTCGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTAGTCAAAGACGTAATTGAACCATTGGAAAGTGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCAAGATTTTGGGCCTCCTCAACAGCATTATTGGTTTCTGATTTTGAGCCAAGGATCAACCATTAAGATTGTGGACAACTTGCATGATGACATATTAGCTGGGAAGCTTAAATCCGGTAGTGAAATAAAGTCTCCAGATTTTGAGGATATGGTATCCCTACATACAAAGAGAGAGAACAACAGAGAATAA

Coding sequence (CDS)

AAACAAAGAAAGGATTTCTATCAGTTTCAGACAAGAATGACGGTTACTCATTCGTCTATCCTATTCGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTAGTCAAAGACGTAATTGAACCATTGGAAAGTGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCAAGATTTTGGGCCTCCTCAACAGCATTATTGGTTTCTGATTTTGAGCCAAGGATCAACCATTAAGATTGTGGACAACTTGCATGATGACATATTAGCTGGGAAGCTTAAATCCGGTAGTGAAATAAAGTCTCCAGATTTTGAGGATATGGTATCCCTACATACAAAGAGAGAGAACAACAGAGAATAA

Protein sequence

KQRKDFYQFQTRMTVTHSSILFGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQHYWFLILSQGSTIKIVDNLHDDILAGKLKSGSEIKSPDFEDMVSLHTKRENNRE*
Homology
[Close]
BLAST of ChyUNG230390 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVI+GQDKV KDVIEPLESVSVNL+PTSK+ I++FGPP+Q
Sbjct: 97  FGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQ 141

[Close]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match: A0A6J1JIR8 (psbP-like protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487303 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 108 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 152

[Close]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match: A0A5D3C3H9 (PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002630 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 102 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 146

[Close]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match: A0A6J1E0E5 (psbP-like protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111429701 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 108 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 152

[Close]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match: A0A1S3CJG4 (psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 102 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 146

[Close]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVIDGQDKV KDVIEPLE+VSVNLIPTSKEDI+DFGPPQQ
Sbjct: 102 FGWQEVVIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQ 146

[Close]
BLAST of ChyUNG230390 vs. NCBI nr
Match: XP_008463515.1 (PREDICTED: psbP-like protein 1, chloroplastic [Cucumis melo] >TYK05768.1 psbP-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 7.89e-20
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 66
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 102 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 146

[Close]
BLAST of ChyUNG230390 vs. NCBI nr
Match: KAG6602343.1 (PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 8.85e-20
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 66
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 108 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 152

[Close]
BLAST of ChyUNG230390 vs. NCBI nr
Match: XP_022921417.1 (psbP-like protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 91.7 bits (226), Expect = 8.85e-20
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 66
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 108 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 152

[Close]
BLAST of ChyUNG230390 vs. NCBI nr
Match: XP_022990447.1 (psbP-like protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 8.85e-20
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 66
           FGWQEVVIDGQDKV KDVIEPLESVSVNLIPTSKEDI+DFGPPQQ
Sbjct: 108 FGWQEVVIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQ 152

[Close]
BLAST of ChyUNG230390 vs. NCBI nr
Match: PKI35228.1 (hypothetical protein CRG98_044394 [Punica granatum])

HSP 1 Score: 90.9 bits (224), Expect = 9.78e-20
Identity = 46/64 (71.88%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 3   RKDFYQFQTRMTVTHSSILFGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFG 62
           RKD Y+F            FGWQEVVIDGQDKV KDVIEPLESVSVN+IPTSK+DI+DFG
Sbjct: 69  RKDGYEFLYP---------FGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKQDIKDFG 123

Query: 63  PPQQ 66
           PPQQ
Sbjct: 129 PPQQ 123

[Close]
BLAST of ChyUNG230390 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 22  FGWQEVVIDGQDKVVKDVIEPLESVSVNLIPTSKEDIQDFGPPQQ 67
           FGWQEVVI+GQDKV KDVIEPLESVSVNL+PTSK+ I++FGPP+Q
Sbjct: 97  FGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQ 141

[Close]
BLAST of ChyUNG230390 vs. TAIR 10
Match: AT2G45770.1 (signal recognition particle receptor protein, chloroplast (FTSY) )

HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04
Identity = 23/63 (36.51%), Postives = 35/63 (55.56%), Query Frame = 0 

Query: 58  IQDFGPPQQHYWFLILSQGSTIKIVDNLHDDILAGKLKSGSEIKSPDFEDMVSLHTKREN 117
           + DFGP              T++IV+ L +DI++GKLKSGSEIK    E ++ +  K+ +
Sbjct: 106 VSDFGPK------------ITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNS 156

Query: 118 NRE 121
             E
Sbjct: 166 KTE 156

[Close]
BLAST of ChyUNG230390 vs. TAIR 10
Match: AT2G45770.2 (signal recognition particle receptor protein, chloroplast (FTSY) )

HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04
Identity = 23/63 (36.51%), Postives = 35/63 (55.56%), Query Frame = 0 

Query: 58  IQDFGPPQQHYWFLILSQGSTIKIVDNLHDDILAGKLKSGSEIKSPDFEDMVSLHTKREN 117
           + DFGP              T++IV+ L +DI++GKLKSGSEIK    E ++ +  K+ +
Sbjct: 106 VSDFGPK------------ITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNS 156

Query: 118 NRE 121
             E
Sbjct: 166 KTE 156

The following BLAST results are available for this feature:
BLAST of ChyUNG230390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P825382.9e-1582.22PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ... [more]
BLAST of ChyUNG230390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JIR82.3e-1595.56psbP-like protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487303 P... [more]
A0A5D3C3H92.3e-1595.56PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G0... [more]
A0A6J1E0E52.3e-1595.56psbP-like protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111429701... [more]
A0A1S3CJG42.3e-1595.56psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 ... [more]
A0A0A0KS545.2e-1593.33PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S... [more]
BLAST of ChyUNG230390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463515.17.89e-2095.56PREDICTED: psbP-like protein 1, chloroplastic [Cucumis melo] >TYK05768.1 psbP-li... [more]
KAG6602343.18.85e-2095.56PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_022921417.18.85e-2095.56psbP-like protein 1, chloroplastic [Cucurbita moschata][more]
XP_022990447.18.85e-2095.56psbP-like protein 1, chloroplastic [Cucurbita maxima][more]
PKI35228.19.78e-2071.88hypothetical protein CRG98_044394 [Punica granatum][more]
BLAST of ChyUNG230390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G55330.12.1e-1682.22PsbP-like protein 1 [more]
AT2G45770.12.4e-0436.51signal recognition particle receptor protein, chloroplast (FTSY) [more]
AT2G45770.22.4e-0436.51signal recognition particle receptor protein, chloroplast (FTSY) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 2..101
e-value: 1.4E-8
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..120
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 22..66
NoneNo IPR availablePANTHERPTHR31407:SF4PSBP-LIKE PROTEIN 1, CHLOROPLASTICcoord: 22..66
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 23..66
e-value: 1.3E-7
score: 31.9
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 22..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ChyUNG230390.1ChyUNG230390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009507 chloroplast
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding