ChyUNG228950 (gene) Cucumber (hystrix) v1

Overview
NameChyUNG228950
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTransmembrane protein
Locationscaffold26_size3936274: 3291783 .. 3295825 (-)
RNA-Seq ExpressionChyUNG228950
SyntenyChyUNG228950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTCTGAGGAACAGAGGAGAAGGAATTGCCTCCTCCCTATCTTCTTACGATCACTCTCGCTTGTTGCTTGCCACTAGACCTCCCAGGTGCTTTCTTCTCTCCTTTCTCTCCCTTCACTCTCTTTGGATTCAACCCTCTTCATACGCTTTCATTGGTTTCGGGGCTGACAGCACTGCCTCCTCCCTATGAATTCCATTGATTTTCTTTCATTCTACTGCATTCACTACAAGGATTGAAGGGATTTATTGAAACTTGCTAGATACTAGTCTCAATTTGACAACTCGACCGCCGGGAAGGTTCCGATATCCCTCTGGCTTTTTAGGTTGGCATAACGAAGAGAACGAATGCCACGAAACAAAATACACCCTTCCCTTTTGGTTTGAATCTATCAAACTTGATCAACTATTTATGACTAATTCTAATGTAGGGGAGCTCCTAATAGACTTGAACCCTTAATTCTAATTTCCAGCATGAATATATAAATGCTTCTGTATAGATAAAACATGTAATTTTAACCTTGAAAACAAATTATACTCCTCCTGAAACTAACAAAGTTAATTCAATTAATGATATTTGATGGAGATTAATCGAATGATAGATGGAGAGAAATCAAATTGTGAGCAACATCCTCGGAAAATGGTTCCTGAAAGAGTATAAGTTTTTTTCTGAAACATCTTTCGTATCTTGCCTTGTGTAGCTTGGATCAATTCATTTCCTCACCGTCGATTCTGCTACACAAGGCAACATCCTAGGCAAATGCCTTGTTGCTCATTCGTTTGTAAGGATGATCATCATCCTAGGCTGATGGTTCCAGAAGGAGGATAAGTTTCTTAATGAAAGTCGAAGTTTTTTTTTTTCTAAAATTTTTAAAGAAAAGAAATCTTAGGGAAATGGACACGCGAAGACAAGTACATAAGCATTAGGAAGTTGCTTCACCCAAGACATATACTGGAGGAAAAAAGCACTTGGCCGTACCACATTAAAGGCAGGGGGCAAGGTAACAAGGATCAACTTGAGGCAAAGATGAGGTGAGCTGAGGAATGACATGACCCTTAAGACCGATTGACAGTCAAGGTTCTTCCTCTAAGTAAGTTTAAACAGTAGATTCTCGTTGTTGTCTTGGTTGGGAAAATTTTAACGAAGATTCAAGATGAAGACATTGAAATGACTAGTGAAATTGAGAGTTGGTATGGTGCTAAGCTACACACACTTTGACGCTTAAGTTATTATTATTATTATTTTATGAAAATAGACAACTTTCAAATTAGTATTCGGATTCTGAATCATCATCGTTTGCCATTTGATTATTGCTCATGATAACAGATGACAATTCTTAGTAAAGCACAAGAATTGTTTCCACGTACGACACCATATACTGATACCAAAATCTAGTCCAATGGTGAATAGGCATAGTATTTATCGAATTATGACTACAAAATGTGTAAGTGGTACACTGATGTGGTGTTGAGCTTAGTCATTTGATCAAGTTTGTCTTCTCTGGCTTGCAAGGCTGCTATTCTGTGGGATCTTTGGGATGAGCTGAATAATGGAGTGTTTATAGGATTGGAAAAGGATCCTAGTGATGTTTGGTTCCTTGTTAGATTTCATGTTTCCCTCTAGGCTTCAATTTCAAGAACCTTTTGTAATTAATCCAGTTTTTTCTTCTTCTTCTTCTTTTTTTCTTTCTTGTATAGCTCTTTCTTTTAATTGGGATCCTTCGTGGACTTTGTTTTTTGTATGCTCTTGTACTCTTTCATTTTACTCCATGAAAGTTGTTTCAATAAATAAAAAATAAAAGGTTAGTATCGGTTTTGTGAGTAACCTAGACAATACAGTATTGTATTTTCGAATACTTTTGGACATGTTATGTCGTCCTCTTTTAGGTTTCAATTTGTAACAAAAGATAAAGCTAATCAACATCCTACCAAGAATCTCACTGGGATTCTTAGGGTGTTACAAGTCAAATGGAATTGTGATAAGTTTGATGCAAACAAATCTTGATCGATTCTTCTAGACTTAATTACTGGGTGTTGGTCGATCCCCTAAGGAGCTGACCACTTGGCCTCAATCCACCTTTTAGAGTGTTGGCCTAATCGGTTCTTGGGGTCAGCCAACTTTGCCTTGGGTTGACGTTAATCCTCATGGGTGGGTTTGATTTCGGCACTTGGGTTCTTTGACTTTGGCTTTGTTTAGCACATTGACTTTATATCAGGCTTTAGGTCTTTTCTTGTAAGACATAAATTTATAAAATCCAACACAACAAGCCAATGTCCAGCCGCGACTTCTTTTTGTGGATGAGGAATAAAACATAGGGAGAAAGAACTCTGACCTGAAGAAGATGTTAAAGCTGTTAGATTATGAGCAACTTTGTTCTCCTCTCTAGGGATTTTACAAATATTAGAAACAATAGCTGATGGAGTGAGAAAGAGCGCCCCCTCAACAAAAATAAATAAATAAACCTTAGACAAGTCAGAATTCTCTTGATTCAAAAGCTTGATGATTTTGAATTATTCCGACTCGACCACCATGGATGGATGGGCTCTTGGTCTTTTATGGGTCTTGGACATCTCATATTAGATAATTTCACCCCCAACTTCTATTATGCAAAGGCCTGCCCACACTTAAGAAACACGGACACTCTTGAAATGTCAACACGTGTACATGCCTCTGACACATGTCTGACATGCCAGCTAGCATGTCCATTATTTTATTTTTAAATATTTTGTTTCCGACGCGGCAAGACACGTAAAGGTCACAACAACCTGCAAATGTTTGAAGAAAAAAACTATTAAAACAAGGCATTCGAACTGCAGTGTTATCAAGGCAACCTGGGTGCACAACTGAAGAATCTATCCTTTTTTTCTTCTATAGCTTCTTCAACTTCTTAGACATCTTAGAAATAAGCTGGGAAAAAAGAACATGAAAAAGAAGATGAGTTGGGAGAAGAAAAATGAAAAGAAGAGTAAAGAAAAAAGTGAAGACTCCATGAAAAGAAGAAGGCGTCAAGAAAATTTCAAAAGAAGAAAAAGATGTATGAAAAGACGAGACTATTTTCAGACTCATCAGATCTGGCAGTCTACTATTTTCAACATATCTAAAAAAATTGTTCAGTTTTATATAAACTATTCAAAAGTTTTCTTAATATTTTTATTTATAAAAAAATCAAGATTTTTCCTCTTTCTTAAACACAAACCTCATGCTGGGAACTTTAGTTTCTTTCTCCCATTTCTTCTGTTTTTAATTCATATATATATATATTTTTTTATTTTTATTGTAAGGTTGTTAGTTTGATGTTTTTAAAGGTAATATTTCACAATATGTGCACAACATAGATTCGTTTAAAAAAAAAAAAGAATAATGTGTTCCCGACGTGTCGTGTTCTACTTTTTTAGAAACTAACGTGTTACCGTGTCAATGTCGTGTGTCAATGTCGTGTGTCAATGTCGTGTGTCTGTGCTTCTTAGCCCACACCTAAGCATAAGAGTTGCGCTTTAGTGCACACAAGCTATGAAAACATCTGATCTAGTGAATTGCCCTGTCACAAGAACATTAAAGAAAAGCTTCACTCTATTGGATCTTCCCTACGATTTTTTTTAGTACCTATAATTTATTTTCTATATTTCACAACTATAGTGTTGTGTTTTTTTGTGGGTTGTAGCATTTTTGTTTTCTTTGGATGTAATTTTTCGCTCTAGCTTAATATACAGATGGTTTACCATATCAAAACAAAAATAAGGATCGAGACTTTAAGTGCTAGATTGAATTTAATTTCATTTATGTGATTTTTTTCTTTTCATCTGCATTGAGTAGAAACCATAAAAAGTTCAGTATTCCCTCATTTGTTCTAATATGATTAATATGACCATTTCGAGAGCAGACAAGTAGTATCAATATGGACTTGTTCAAAGCTATGTGCTGTTTGCTTTGTCACCGGGGTGCTCGTTGGTTACTCGTTAAAGCGATGTGTTAATCGATGGATTTCCAAGCTATTGAGGAGATTGAAAGATTGA

mRNA sequence

ATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTCTGAGGAACAGAGGAGAAGGAATTGCCTCCTCCCTATCTTCTTACGATCACTCTCGCTTGTTGCTTGCCACTAGACCTCCCAGACAAGTAGTATCAATATGGACTTGTTCAAAGCTATGTGCTGTTTGCTTTGTCACCGGGGTGCTCGTTGGTTACTCGTTAAAGCGATGTGTTAATCGATGGATTTCCAAGCTATTGAGGAGATTGAAAGATTGA

Coding sequence (CDS)

ATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTCTGAGGAACAGAGGAGAAGGAATTGCCTCCTCCCTATCTTCTTACGATCACTCTCGCTTGTTGCTTGCCACTAGACCTCCCAGACAAGTAGTATCAATATGGACTTGTTCAAAGCTATGTGCTGTTTGCTTTGTCACCGGGGTGCTCGTTGGTTACTCGTTAAAGCGATGTGTTAATCGATGGATTTCCAAGCTATTGAGGAGATTGAAAGATTGA

Protein sequence

MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGVLVGYSLKRCVNRWISKLLRRLKD*
Homology
[Close]
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match: A0A0A0KUK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G529450 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKSGISSSSVEALRN+GEGIASSLSSYDHSR LLATRPPRQVVSIWTCSKLCAVCFVTGV
Sbjct: 1  MKSGISSSSVEALRNKGEGIASSLSSYDHSRFLLATRPPRQVVSIWTCSKLCAVCFVTGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 84
          +VGYSLKRCVNRWISKLLRRLKD
Sbjct: 61 VVGYSLKRCVNRWISKLLRRLKD 83

[Close]
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match: A0A6J1I9S5 (uncharacterized protein LOC111472885 OS=Cucurbita maxima OX=3661 GN=LOC111472885 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKS    SSVEALR+ GEGIAS+LSS D SRLLLATRPPRQVVSI TCSKLC +CFV GV
Sbjct: 1  MKSAALPSSVEALRS-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 84
          LVGYSLKRCVNRW+SKLLRRLKD
Sbjct: 61 LVGYSLKRCVNRWVSKLLRRLKD 82

[Close]
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match: A0A6J1GW53 (uncharacterized protein LOC111458016 OS=Cucurbita moschata OX=3662 GN=LOC111458016 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKS    SSVEALRN GEGIAS+LSS D SRLLLATRPPRQVVSI TCSKLC +CFV GV
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 84
          +VGYSLKR VNRW+SKLLRRLK+
Sbjct: 61 VVGYSLKRRVNRWVSKLLRRLKE 82

[Close]
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match: W9RT53 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003318 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-19
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 2  KSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGVL 61
          KS  SSSS   +    EGI+++LSS D SRLL+ +RPPR VVS+WTCSKLCA+CFV GV+
Sbjct: 16 KSASSSSSTFDIPRVNEGISAALSSPDQSRLLV-SRPPRNVVSLWTCSKLCAICFVVGVV 75

Query: 62 VGYSLKRCVNRWISKLLRRLKD 84
          VGY+LKR V RW S+LL+RLKD
Sbjct: 76 VGYTLKRRVRRWASRLLKRLKD 96

[Close]
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match: A0A314Z6R0 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_06038 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 0 

Query: 3   SGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGVLV 62
           S  SSSS ++ R  GEG+A++LSS D SR+L   RP R VVS+WTCSKLC +CFV G++V
Sbjct: 22  SSSSSSSFDSHR-AGEGLAAALSSSDQSRILF-NRPARHVVSLWTCSKLCTLCFVAGIVV 81

Query: 63  GYSLKRCVNRWISKLLRRLKD 84
           GY+LKR V RW S+LL+R+KD
Sbjct: 82  GYTLKRRVRRWASRLLKRIKD 100

[Close]
BLAST of ChyUNG228950 vs. NCBI nr
Match: KGN51411.1 (hypothetical protein Csa_007923 [Cucumis sativus])

HSP 1 Score: 160 bits (404), Expect = 3.25e-49
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKSGISSSSVEALRN+GEGIASSLSSYDHSR LLATRPPRQVVSIWTCSKLCAVCFVTGV
Sbjct: 1  MKSGISSSSVEALRNKGEGIASSLSSYDHSRFLLATRPPRQVVSIWTCSKLCAVCFVTGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 83
          +VGYSLKRCVNRWISKLLRRLKD
Sbjct: 61 VVGYSLKRCVNRWISKLLRRLKD 83

[Close]
BLAST of ChyUNG228950 vs. NCBI nr
Match: XP_038893067.1 (uncharacterized protein LOC120081950 [Benincasa hispida])

HSP 1 Score: 150 bits (380), Expect = 1.54e-45
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKSG+SSSSVE LRNRGEGIAS+LSS D SRLLLATRPPRQVVSIWTCSKLCAVCFV GV
Sbjct: 1  MKSGVSSSSVEVLRNRGEGIASALSSSDQSRLLLATRPPRQVVSIWTCSKLCAVCFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 83
          +VGYSLKRCVNRW+SKLLRRLKD
Sbjct: 61 VVGYSLKRCVNRWVSKLLRRLKD 83

[Close]
BLAST of ChyUNG228950 vs. NCBI nr
Match: XP_022974252.1 (uncharacterized protein LOC111472885 [Cucurbita maxima])

HSP 1 Score: 130 bits (326), Expect = 2.58e-37
Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKS    SSVEALR+ GEGIAS+LSS D SRLLLATRPPRQVVSI TCSKLC +CFV GV
Sbjct: 1  MKSAALPSSVEALRS-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 83
          LVGYSLKRCVNRW+SKLLRRLKD
Sbjct: 61 LVGYSLKRCVNRWVSKLLRRLKD 82

[Close]
BLAST of ChyUNG228950 vs. NCBI nr
Match: XP_023540347.1 (uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo] >KAG6597021.1 hypothetical protein SDJN03_10201, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028499.1 hypothetical protein SDJN02_09680 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126 bits (316), Expect = 8.65e-36
Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKS    SSVEALRN GEGIAS+LSS D SRLLLATRPPRQVVSI TCSKLC +CFV GV
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 83
          +VGYSLKR VNRW+SKLLRRLKD
Sbjct: 61 VVGYSLKRRVNRWVSKLLRRLKD 82

[Close]
BLAST of ChyUNG228950 vs. NCBI nr
Match: XP_022956291.1 (uncharacterized protein LOC111458016 [Cucurbita moschata])

HSP 1 Score: 124 bits (312), Expect = 3.52e-35
Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGV 60
          MKS    SSVEALRN GEGIAS+LSS D SRLLLATRPPRQVVSI TCSKLC +CFV GV
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV 60

Query: 61 LVGYSLKRCVNRWISKLLRRLKD 83
          +VGYSLKR VNRW+SKLLRRLK+
Sbjct: 61 VVGYSLKRRVNRWVSKLLRRLKE 82

[Close]
BLAST of ChyUNG228950 vs. TAIR 10
Match: AT1G19240.1 (unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 4.6e-15
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 3   SGISSSSVEALRNRGEGIASSLSSYDHSRLLLATRPPRQVVSIWTCSKLCAVCFVTGVLV 62
           S +S  +   ++++     +  ++YD     L TRPP   VS+WTCSKLCAV FV GV V
Sbjct: 24  SSLSDFADNLMQDKRAAAGNLTTTYDAGSGTLVTRPP-SGVSVWTCSKLCAVFFVAGVFV 83

Query: 63  GYSLKRCVNRWISKLLRRLKD 84
           GY+LKR V RW SKLLRR+KD
Sbjct: 84  GYTLKRRVRRWASKLLRRIKD 103

The following BLAST results are available for this feature:
BLAST of ChyUNG228950 vs.
Match NameE-valueIdentityDescription
BLAST of ChyUNG228950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUK22.2e-3696.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G529450 PE=4 SV=1[more]
A0A6J1I9S52.4e-2783.13uncharacterized protein LOC111472885 OS=Cucurbita maxima OX=3661 GN=LOC111472885... [more]
A0A6J1GW531.0e-2580.72uncharacterized protein LOC111458016 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
W9RT539.1e-1964.63Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003318 PE=4 SV=1[more]
A0A314Z6R01.5e-1660.49Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_060... [more]
BLAST of ChyUNG228950 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51411.13.25e-4996.39hypothetical protein Csa_007923 [Cucumis sativus][more]
XP_038893067.11.54e-4590.36uncharacterized protein LOC120081950 [Benincasa hispida][more]
XP_022974252.12.58e-3783.13uncharacterized protein LOC111472885 [Cucurbita maxima][more]
XP_023540347.18.65e-3681.93uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo] >KAG6597021.1 ... [more]
XP_022956291.13.52e-3580.72uncharacterized protein LOC111458016 [Cucurbita moschata][more]
BLAST of ChyUNG228950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19240.14.6e-1550.62unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bac... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ChyUNG228950.1ChyUNG228950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane