
ChyUNG228880 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTGATTCAAGTCAATCATTTTGAGGATTTTGATTCTGACGACGATGATGATGCTATATGCATCATTTTCACTTTATTACACATGAGCTTGCACAAGATACAGTCTTCTAAACAACCATGTGGAACCTCTGCACTGAGAGGACATGATTATGTGATCGAGTTGTTAAATGGAAACTATAGTAGATGTTTTGATTGCTTTAGTATGAAAAGAGTTACATTCGTAAGGTTTTGTGAAGATTTAAAATCCAAGACAAATTTGAAAGCATCTAGGTATCTCACTGTTCAAGAGAAAGTAGCTATATTCTTATTGATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAATCGGGTTTTGAGAAAGGTTTGCAAGCTTGGACTAGAAATTATTAATCCACCCAATATGGACACTATACCAATGGAGATAGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGTGTAATTTTTTTGAAATATTATCCTCTCTTGCATTGGAGTTCATACTAATTCAAAATATATTTGTGTCTATGATTGTGCTTTAGGATTGTATTGGTGTTATTGATGGCACTCACGTTCCAACAAGTATTCCCCAAAATGAGCAAATACCATTTCGTGGAAGAAAAACTAACACAACATGGAATATCATGTGTGTCTGTTCATTTGATATGTTATTCACGTATGTCATGTCTGGTTGGGAAGGATCGGCCAATGATTCTCGCATACTTATTGAATGTATAAACAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGGTAAATAATTATGTCTTTTTAAAACTTTAAATGAAATGGATGACTTTATGATGATGATTTATTTATTTTATTATATGCAGAGCAATACTATCTTGTCAATTCAGGATATTCAAATATGCCAGGATTTTTAGCACTATTCCGTGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGTCCTCGAGGTAAAGAAGAAGTGTTTAACTATCGACATTTGTCACTGCAAAATGTCATTGGACGTTGTTTTGGTGTGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCATACCCGGTCAAGACACAAAAATATATACCGATAGCATGTTACACAATTCACAATTATATTAGATTGAATGATCGTCAAGATGATATTCAATGACTTTAGCAATGAATCAATGATCGTTGAAGATACAAATAATTTTTCAGGAAATTTGCAA ATGGATGTGATTCAAGTCAATCATTTTGAGGATTTTGATTCTGACGACGATGATGATGTTTGCAAGCTTGGACTAGAAATTATTAATCCACCCAATATGGACACTATACCAATGGAGATAGTATCAAATTCAAAATATTACCCTTTCTTTAAGGATTGTATTGGTGTTATTGATGGCACTCACGTTCCAACAAGTATTCCCCAAAATGAGCAAATACCATTTCGTGGAAGAAAAACTAACACAACATGGAATATCATGTGTGTCTGTTCATTTGATATGTTATTCACGTATGTCATGTCTGGTTGGGAAGGATCGGCCAATGATTCTCGCATACTTATTGAATGTATAAACAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGAGCAATACTATCTTGTCAATTCAGGATATTCAAATATGCCAGGATTTTTAGCACTATTCCGTGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGTCCTCGAGGTAAAGAAGAAGTGTTTAACTATCGACATTTGTCACTGCAAAATGTCATTGGACGTTGTTTTGGTGTGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCATACCCGGTCAAGACACAAAAATATATACCGATAGCATGTTACACAATTCACAATTATATTAGATTGAATGATCGTCAAGATGATATTCAATGACTTTAGCAATGAATCAATGATCGTTGAAGATACAAATAATTTTTCAGGAAATTTGCAA ATGGATGTGATTCAAGTCAATCATTTTGAGGATTTTGATTCTGACGACGATGATGATGTTTGCAAGCTTGGACTAGAAATTATTAATCCACCCAATATGGACACTATACCAATGGAGATAGTATCAAATTCAAAATATTACCCTTTCTTTAAGGATTGTATTGGTGTTATTGATGGCACTCACGTTCCAACAAGTATTCCCCAAAATGAGCAAATACCATTTCGTGGAAGAAAAACTAACACAACATGGAATATCATGTGTGTCTGTTCATTTGATATGTTATTCACGTATGTCATGTCTGGTTGGGAAGGATCGGCCAATGATTCTCGCATACTTATTGAATGTATAAACAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGAGCAATACTATCTTGTCAATTCAGGATATTCAAATATGCCAGGATTTTTAGCACTATTCCGTGGTCAAAGATATCATTTACGAGATTTTAGAGAAAGGAGACATCGTCCTCGAGGTAAAGAAGAAGTGTTTAACTATCGACATTTGTCACTGCAAAATGTCATTGGACGTTGTTTTGGTGTGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCATACCCGGTCAAGACACAAAAATATATACCGATAGCATGTTACACAATTCACAATTATATTAGATTGAATGATCGTCAAGATGATATTCAATGACTTTAGCAATGAATCAATGATCGTTGAAGATACAAATAATTTTTCAGGAAATTTGCAA MDVIQVNHFEDFDSDDDDDVCKLGLEIINPPNMDTIPMEIVSNSKYYPFFKDCIGVIDGTHVPTSIPQNEQIPFRGRKTNTTWNIMCVCSFDMLFTYVMSGWEGSANDSRILIECINNPENKFPMPKREQYYLVNSGYSNMPGFLALFRGQRYHLRDFRERRHRPRGKEEVFNYRHLSLQNVIGRCFGVLKARFPILKQMPPYPVKTQKYIPIACYTIHNYIRLNDRQDDIQ*L*Q*INDR*RYK*FFRKFAX Homology
BLAST of ChyUNG228880 vs. ExPASy TrEMBL
Match: A0A5D3C7F6 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00500 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116 Identity = 205/253 (81.03%), Postives = 215/253 (84.98%), Query Frame = 0
BLAST of ChyUNG228880 vs. ExPASy TrEMBL
Match: A0A5A7VNL5 (Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001450 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 8.6e-105 Identity = 178/199 (89.45%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of ChyUNG228880 vs. ExPASy TrEMBL
Match: A0A5D3DC11 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00620 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.5e-104 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of ChyUNG228880 vs. ExPASy TrEMBL
Match: A0A1S4E0U9 (uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 3.3e-96 Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 0
BLAST of ChyUNG228880 vs. ExPASy TrEMBL
Match: A0A4Y7J673 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.3e-79 Identity = 130/212 (61.32%), Postives = 171/212 (80.66%), Query Frame = 0
BLAST of ChyUNG228880 vs. NCBI nr
Match: TYK06269.1 (protein ALP1-like [Cucumis melo var. makuwa]) HSP 1 Score: 424 bits (1091), Expect = 1.31e-147 Identity = 205/253 (81.03%), Postives = 215/253 (84.98%), Query Frame = 0
BLAST of ChyUNG228880 vs. NCBI nr
Match: KAA0068176.1 (putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 385 bits (988), Expect = 9.27e-133 Identity = 178/199 (89.45%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of ChyUNG228880 vs. NCBI nr
Match: TYK21096.1 (protein ALP1-like [Cucumis melo var. makuwa]) HSP 1 Score: 381 bits (979), Expect = 2.18e-131 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of ChyUNG228880 vs. NCBI nr
Match: XP_016901856.1 (PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo]) HSP 1 Score: 356 bits (914), Expect = 4.97e-122 Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 0
BLAST of ChyUNG228880 vs. NCBI nr
Match: XP_028091541.1 (uncharacterized protein LOC114291856 [Camellia sinensis]) HSP 1 Score: 309 bits (792), Expect = 1.27e-101 Identity = 130/212 (61.32%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of ChyUNG228880 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 159.5 bits (402), Expect = 3.6e-39 Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 0
BLAST of ChyUNG228880 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 128.6 bits (322), Expect = 6.9e-30 Identity = 60/137 (43.80%), Postives = 86/137 (62.77%), Query Frame = 0
BLAST of ChyUNG228880 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 122.5 bits (306), Expect = 4.9e-28 Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0
BLAST of ChyUNG228880 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.1 bits (253), Expect = 6.9e-22 Identity = 38/95 (40.00%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of ChyUNG228880 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13 Identity = 44/164 (26.83%), Postives = 75/164 (45.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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