ChyUNG228850 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGACAAGGTTCCAAGGAAACAGAAGACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACGTTTCAGGTATTTGATTTATGTTTTCTTCTTTTTGGTTTGTTTATTGTGATCTGTGTTCTAAAAAGTCCACAGCCCACTGAGTCATGCACCTTGGTGCGATTAAGTAGGCGCACACAACCTTTTTGTGACTGTCTCACTTTAAATAATCGAGGCTCCCTTAGTGAAGCCCACTTGAAGCTCTATCTCAAGGCTTGTGATGTTTGCCTCAATGCCTCGAGCTTGATTTCTTACTCTTTCCTCTTTTAGTATTTAAGTAATAATTATATTAATATTCCTACCATCTGTTAAAAGCTCTATTTTGTTGAGCTTTTTTAGAAAGCAGCAACCCATAGCACCTCTTTTTTGCATATTGCAAATATGACAAATATGACAAATAATTAAATATATCAGAGGGCTATCTGCTTTTCAATTTGCTACTTTTGCAATTTAAAAAATGTAGTGACATAGACTCTATTATCGTAAATTTTTTGCTATTTTTGCAAACGCTCTGAATATTTTCTCCTTGAGTATTATGATATTTCTCTATTGATTCCTTTTTTTCTTTTATGACAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGTATTATTTTCTTTCTACCTTGATTAATTTATCAAAAACTTGAAGTAGTTGTTTTTAATATCGTGTCGAATGCATTATGAAAACAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGTCAATTCACCTAGAGGTAAATCTTCAACTAAAAAAAAATTTCTTTTTCCTTCTAACAAGTACTTCAAAACCTATATTTATATGGTCCTTAGTTAATCTGATGTTCTGTATAAATTATTCATAAATCTTTCATCTCATGCTACTAATATGAAGCTTATGTACACTCTTCTTGAAGAAGGTTCTAGTGGATGTTCTTCCAAGGGTTTCATTTAGCCTCCTTTCTAGTCTGGTTTGGGATCCAGTTGATTCAGATTTCAGTTTACCCGTATGTACTATATATTGTTTTAAAAAGGGAACAAGTCTCTTTTATTGATATAATAATGAGACAAGGCTTATAGTATGCAAGAATTGTACGAAGAGCTAAAAACCTAAGGATCATAAGGCGCGCTTGGAAATTCAACTATATTGACACCCCTTATAAAAAATGGAAACCTTACAAAACTATCAAAACTTTCCATTTGAGACCCAACGAAGCCTATATGACAGTGTCAACTAATACAAAGGAATCCAAAGAGATAATTCCTTCTAGAACAAAAGACTAATCAACAAAAGCAAGAGAACAAAAGGCCAACCGGCTCCATGCCCACAGATAAGATGAAAACGTAAAAGCTCTCCAAATCATGTTGATCTCCAGGAGTTCTGTAACTGTCAAACTCCTTAGAAGGATGCATCAAGATGAAGCATTTCTACTAGCGATTTCATTACAATCCAACCAACCAAGGGATTGGTCATGGTTCCTTTTAAACCATAAATCTGCCAAAATCACTTTTACTGCAAACGAGTGGTTTTGTTGAACAAAGCCCTCCTAGAAACTGCCATACTGATCCTCTAAAATCATCACTTTCCATGATGGCGAAGTCTCAAGCTAAAACCTTAGAACTCCATAGAGACTTAATGAAACACAAATAGAAAACTTCTTTCTTTGATTCTTGAATAAGTGCCAAATCCGAATTATGAGACTTCAAAAAAACTTTTGAGGCGGATCTTTTTTTGGATTTTTCAATCCTCTAGAATTTCATGAAACAATTTTCATTGTCTATCGAACTTTTCACTAACATGGTATGAAATGAAATGAATAAATAAGTACGTAGCAATATCTACTCTGTTTTACAAAACATTTCCAGGTAGAAGTTCTGAAACAACGATGTAATAAAGTTCAGAATAGGGTTGTAAATGACTCGGTTCGGCTTTGTTGCTGTATAAAACCAGAGCCGATCCTGCGCTTCATTTATCACCTTTGAAGTTACCTTATTACCCTTTTGAGAGTAATGTATAAAGGATTGGGGTCTTACAGAATATTCTTTCTGTTTGTGTAGCTTGTGCAGACATTGGTATTTGCTTGTGATTGGCAATCTTAGTTAGAATATTACTTCTGTAGCTTGTGATTGTCATTCTTATTTAGAATATCCTTTCTGTTTGTGTAGCTTGTGACATTGTTATTTGCTTGCGATTGACATTCTTAGTTTACACAAAGCGATTGCAAAACTTGTATTTCCTAATTTTGTTATAGTCAAAGCTCTGAAGTCTGAAGTCTTTCATCTTTAACCAAGTGGATTTTTCCAAGAGCCCCAGATTTAACGATCAAGAGCTTCTTGCACTTGGCACTAACCTTCAATGTGTGATGTTCAGGTGTCGAGGGTCACTGTTCGAGCGAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACGAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAACGCAGCGTCCAATTTGTCTACCTGA ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGACAAGGTTCCAAGGAAACAGAAGACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACGTTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGTCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCGAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACGAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAACGCAGCGTCCAATTTGTCTACCTGA ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGACAAGGTTCCAAGGAAACAGAAGACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACGTTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGTCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCGAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACGAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAACGCAGCGTCCAATTTGTCTACCTGA MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLLSGNIFGFRAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGRGAEHIKWSIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLPRAARPPPKQRDKVDSIGRLPAPTKPIPFSVEYEDGGNAASNLST* Homology
BLAST of ChyUNG228850 vs. ExPASy Swiss-Prot
Match: Q211G7 (50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplO PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-28 Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy Swiss-Prot
Match: Q2RQX9 (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rplO PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.2e-28 Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy Swiss-Prot
Match: A9H3K5 (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=rplO PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.4e-28 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy Swiss-Prot
Match: A4YSL1 (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=rplO PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.1e-28 Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy Swiss-Prot
Match: A7IPQ1 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rplO PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.1e-28 Identity = 77/151 (50.99%), Postives = 99/151 (65.56%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy TrEMBL
Match: A0A0A0KP79 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G532450 PE=3 SV=1) HSP 1 Score: 549.3 bits (1414), Expect = 9.6e-153 Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy TrEMBL
Match: A0A1S4E3M6 (50S ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103499363 PE=3 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 7.1e-148 Identity = 274/284 (96.48%), Postives = 276/284 (97.18%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy TrEMBL
Match: A0A6J1EYQ5 (uncharacterized protein LOC111439779 OS=Cucurbita moschata OX=3662 GN=LOC111439779 PE=3 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.5e-137 Identity = 257/282 (91.13%), Postives = 265/282 (93.97%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy TrEMBL
Match: A0A6J1K819 (uncharacterized protein LOC111493075 OS=Cucurbita maxima OX=3661 GN=LOC111493075 PE=3 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135 Identity = 254/282 (90.07%), Postives = 265/282 (93.97%), Query Frame = 0
BLAST of ChyUNG228850 vs. ExPASy TrEMBL
Match: A0A6J1DT01 (uncharacterized protein LOC111024111 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024111 PE=3 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 3.4e-134 Identity = 255/284 (89.79%), Postives = 262/284 (92.25%), Query Frame = 0
BLAST of ChyUNG228850 vs. NCBI nr
Match: XP_004142813.1 (uncharacterized protein LOC101207666 [Cucumis sativus] >XP_011655431.1 uncharacterized protein LOC101207666 [Cucumis sativus] >KGN51413.1 hypothetical protein Csa_008974 [Cucumis sativus]) HSP 1 Score: 546 bits (1406), Expect = 2.04e-195 Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0
BLAST of ChyUNG228850 vs. NCBI nr
Match: XP_008460571.1 (PREDICTED: 50S ribosomal protein L15 [Cucumis melo] >XP_016902580.1 PREDICTED: 50S ribosomal protein L15 [Cucumis melo]) HSP 1 Score: 530 bits (1364), Expect = 5.14e-189 Identity = 274/284 (96.48%), Postives = 276/284 (97.18%), Query Frame = 0
BLAST of ChyUNG228850 vs. NCBI nr
Match: XP_038893364.1 (50S ribosomal protein L15 [Benincasa hispida]) HSP 1 Score: 512 bits (1318), Expect = 5.26e-182 Identity = 268/284 (94.37%), Postives = 270/284 (95.07%), Query Frame = 0
BLAST of ChyUNG228850 vs. NCBI nr
Match: XP_022933073.1 (uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933074.1 uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933075.1 uncharacterized protein LOC111439779 [Cucurbita moschata]) HSP 1 Score: 494 bits (1273), Expect = 3.52e-175 Identity = 257/282 (91.13%), Postives = 265/282 (93.97%), Query Frame = 0
BLAST of ChyUNG228850 vs. NCBI nr
Match: KAG7032432.1 (rplO [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 493 bits (1269), Expect = 1.43e-174 Identity = 256/282 (90.78%), Postives = 265/282 (93.97%), Query Frame = 0
BLAST of ChyUNG228850 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 384.4 bits (986), Expect = 7.9e-107 Identity = 207/271 (76.38%), Postives = 224/271 (82.66%), Query Frame = 0
BLAST of ChyUNG228850 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 ) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09 Identity = 59/184 (32.07%), Postives = 94/184 (51.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|