ChyUNG228510 (gene) Cucumber (hystrix) v1

Overview


Name	ChyUNG228510
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	AUX/IAA protein
Location	scaffold26_size3936274: 2023680 .. 2024857 (-)
RNA-Seq Expression	ChyUNG228510
Synteny	ChyUNG228510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATGTTCTTCTTCCACCACTGATTCAAAAACCCAGCATAATGCTCAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACAAAACCCAAACAAATTCCTACCAGTATTGCTGCACTTGCCATTGCTCCTCCTCAACCCATCAGCATCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGATGGTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCAGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGTTGATTAAGTTATTTGAGTGTTTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACATACCATAGTAATTTTTAGTAGATTTTAGTTTCAACTTATTATGGGATGAATGTTTGAAAATAATTTAACGAACTTTTACCTTATACACACACACACACACACACACACACACACTATACTAGACTATACTACTACAGTACTACTATTGTGTTTTTTTGTTTGTGATTTTTATATTTAAAGGTGAACTTCTTGATTCCATGAAATTACCGAAACAAACTATAAATATACACACAAGTATGAACTATTCTTTTGTGTGTGAGAGAGTCGGTTTACATTTCACGTTTGTAGAAAAGATATTGAAGAAATCTAAACAAGAAATATTTTTAGATTTGTTATATGATTACTATTCATTAGGCAATCCTAGAATAAAGGATACAACTCCTTTTGATTTCCCCCCTAATTACTCTAATTTTCCTTTCAATTTTATTATGTAAATAATATAATAATTTTTTTTCTAAAAAATTAATATTAATTTCTTAAAAGGAAAATATAAAATGTAATAGAAATTCTTAATTATGATGGACTCACATGTGATTTTGTTCAGAACTATCATGTTGTTAATTACTAGATTTATATAATTGAAATATTTTGTATATAATAGTTTTACTCACGTGCTCAAATAAATAATTTGGATTTTGTTAACTATATAGTTGTATCAATGGTGTTACTCATATAACACTTAACTACTTGTAGGGCTTGA

mRNA sequence

ATGTTTGATGTTCTTCTTCCACCACTGATTCAAAAACCCAGCATAATGCTCAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACAAAACCCAAACAAATTCCTACCAGTATTGCTGCACTTGCCATTGCTCCTCCTCAACCCATCAGCATCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGATGGTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCAGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGGCTTGA

Coding sequence (CDS)

ATGTTTGATGTTCTTCTTCCACCACTGATTCAAAAACCCAGCATAATGCTCAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACAAAACCCAAACAAATTCCTACCAGTATTGCTGCACTTGCCATTGCTCCTCCTCAACCCATCAGCATCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGATGGTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCAGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGGCTTGA

Protein sequence

MFDVLLPPLIQKPSIMLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQPSAPPLPPWLNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRA*

Homology

[Close]

BLAST of ChyUNG228510 vs. ExPASy TrEMBL
Match: A0A0A0KJG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077760 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.0e-67
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 2   FDVLLPPLIQKPSIMLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTH 61
           FDVLLPP IQ P+IMLKATKKKLKGLWSKMKKKNKKKKPN+TQTNSYQYCC CHCSSSTH
Sbjct: 10  FDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTH 69

Query: 62  QH-QQQPSAPPLPPWLNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV 121
           QH QQQPSAPPLP WLND PTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV
Sbjct: 70  QHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV 129

Query: 122 YGVPIIVETESGRGQKWKR 140
           YGVPIIVETESGRGQKWKR
Sbjct: 130 YGVPIIVETESGRGQKWKR 148

[Close]

BLAST of ChyUNG228510 vs. ExPASy TrEMBL
Match: A0A5A7UIP5 (AUX/IAA protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00680 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.7e-47
Identity = 101/124 (81.45%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQPSAPPLPPW 75
           MLKATKKKLKGLWSKM    KKKKPNKTQTN YQYCC+CHCSSS+H H  QPSAPPLPPW
Sbjct: 1   MLKATKKKLKGLWSKM----KKKKPNKTQTNCYQYCCSCHCSSSSHLH-HQPSAPPLPPW 60

Query: 76  LNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQ 135
           LN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQYLVAEPVYGVPIIV+TES R Q
Sbjct: 61  LNEDPTFLPPPTQSQFEHPDRADGM----VTNQWSYQQYLVAEPVYGVPIIVKTESRRDQ 115

Query: 136 KWKR 140
           KWKR
Sbjct: 121 KWKR 115

[Close]

BLAST of ChyUNG228510 vs. ExPASy TrEMBL
Match: A0A6J1EYP6 (uncharacterized protein LOC111439771 OS=Cucurbita moschata OX=3662 GN=LOC111439771 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.5e-16
Identity = 64/118 (54.24%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQPSAPPLPPW 75
           MLKA KKKLK  WS+ KK  +KK PN        +CCTCHCSS+      QPSAPPLPPW
Sbjct: 1   MLKAAKKKLK-FWSRSKK--RKKIPNPNDFPPPCHCCTCHCSSAI-----QPSAPPLPPW 60

Query: 76  LNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGR 134
           L+D     PPS     EHP+ A E+  PLVA    YQ Y+  +PVYGVPIIV+T+S R
Sbjct: 61  LDD--RIFPPS-----EHPEEA-EIAAPLVAAP-LYQHYMDPDPVYGVPIIVQTDSRR 101

[Close]

BLAST of ChyUNG228510 vs. ExPASy TrEMBL
Match: A0A2P5XW94 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12995 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-08
Identity = 54/145 (37.24%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQ---------Q 75
           M KA  KKLK  WS+ K+K K   P  +        C CHCS ST  H           Q
Sbjct: 1   MFKAV-KKLK-FWSRKKRKRKSLAPQPSH-------CICHCSHSTSSHYYQCNYPYSPLQ 60

Query: 76  PSAPPLPPWL------NDGPTFLPPSTQ--SQFEHPDTADEMVE--PLV--ANQWSYQQY 135
           PSAPPLPPWL      ++ PT      +   +F HP    + +E  P++  A   SYQQY
Sbjct: 61  PSAPPLPPWLQAELTQDEFPTLEQAEAEPFPEFSHPTDLVQDIESAPMIPAAAVPSYQQY 120

Query: 136 LVAEPVYGVPIIVETESGRGQKWKR 140
           +V+ PVYG P++ +T   + + W R
Sbjct: 121 MVSNPVYGPPVVQQTAVKKLKFWSR 136

[Close]

BLAST of ChyUNG228510 vs. ExPASy TrEMBL
Match: A0A5D2QDC0 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G118500v1 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.6e-07
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQ---------Q 75
           M KA  KKLK  WS+ K+K K   P  +        C CHCS ST  H           Q
Sbjct: 1   MFKAV-KKLK-FWSRKKRKRKSLAPQPSH-------CICHCSHSTSSHYYQCNYPYSPLQ 60

Query: 76  PSAPPLPPWL------NDGPTFLPPSTQ--SQFEHPDTADEMVE--PLV--ANQWSYQQY 130
           PSAPPLPPWL      ++ PT      +   +F HP    + +E  P++  A   SYQQY
Sbjct: 61  PSAPPLPPWLQAELTQDEFPTLEQAEAEPFPEFSHPTDLVQDIESAPMIPAAAVPSYQQY 120

[Close]

BLAST of ChyUNG228510 vs. NCBI nr
Match: KGN49708.1 (hypothetical protein Csa_018344 [Cucumis sativus])

HSP 1 Score: 265 bits (678), Expect = 9.36e-89
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 2   FDVLLPPLIQKPSIMLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTH 61
           FDVLLPP IQ P+IMLKATKKKLKGLWSKMKKKNKKKKPN+TQTNSYQYCC CHCSSSTH
Sbjct: 10  FDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTH 69

Query: 62  QH-QQQPSAPPLPPWLNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV 121
           QH QQQPSAPPLP WLND PTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV
Sbjct: 70  QHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPV 129

Query: 122 YGVPIIVETESGRGQKWKR 139
           YGVPIIVETESGRGQKWKR
Sbjct: 130 YGVPIIVETESGRGQKWKR 148

[Close]

BLAST of ChyUNG228510 vs. NCBI nr
Match: KAA0054146.1 (AUX/IAA protein [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 1.45e-62
Identity = 101/124 (81.45%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQPSAPPLPPW 75
           MLKATKKKLKGLWSKM    KKKKPNKTQTN YQYCC+CHCSSS+H H Q PSAPPLPPW
Sbjct: 1   MLKATKKKLKGLWSKM----KKKKPNKTQTNCYQYCCSCHCSSSSHLHHQ-PSAPPLPPW 60

Query: 76  LNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQ 135
           LN+ PTFLPP TQSQFEHPD AD MV     NQWSYQQYLVAEPVYGVPIIV+TES R Q
Sbjct: 61  LNEDPTFLPPPTQSQFEHPDRADGMV----TNQWSYQQYLVAEPVYGVPIIVKTESRRDQ 115

Query: 136 KWKR 139
           KWKR
Sbjct: 121 KWKR 115

[Close]

BLAST of ChyUNG228510 vs. NCBI nr
Match: XP_022933064.1 (uncharacterized protein LOC111439771 [Cucurbita moschata])

HSP 1 Score: 93.6 bits (231), Expect = 2.64e-21
Identity = 64/118 (54.24%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQPSAPPLPPW 75
           MLKA KKKLK  WS+ KK+  KK PN        +CCTCHCSS+      QPSAPPLPPW
Sbjct: 1   MLKAAKKKLK-FWSRSKKR--KKIPNPNDFPPPCHCCTCHCSSAI-----QPSAPPLPPW 60

Query: 76  LNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGR 133
           L+D     PPS     EHP+ A E+  PLVA    YQ Y+  +PVYGVPIIV+T+S R
Sbjct: 61  LDD--RIFPPS-----EHPEEA-EIAAPLVAAPL-YQHYMDPDPVYGVPIIVQTDSRR 101

[Close]

BLAST of ChyUNG228510 vs. NCBI nr
Match: KAG6601672.1 (hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 2.35e-20
Identity = 64/120 (53.33%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQ--YCCTCHCSSSTHQHQQQPSAPPLP 75
           MLKA KKKLK  WS+ KK+ K   PN          +CCTCHCSS+      QPSAPPLP
Sbjct: 1   MLKAAKKKLK-FWSRSKKRKKIPDPNDFTPPPPPPCHCCTCHCSSAI-----QPSAPPLP 60

Query: 76  PWLNDGPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGR 133
           PWL+D   F PP      EHP+ A E+  PLVA    YQQY+  +PVYGVPIIV+T+S R
Sbjct: 61  PWLDDR-IFPPP------EHPEEA-EIAAPLVAAPL-YQQYMDPDPVYGVPIIVQTDSRR 105

[Close]

BLAST of ChyUNG228510 vs. NCBI nr
Match: PPS07622.1 (hypothetical protein GOBAR_AA12995 [Gossypium barbadense])

HSP 1 Score: 68.2 bits (165), Expect = 2.23e-10
Identity = 54/145 (37.24%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 16  MLKATKKKLKGLWSKMKKKNKKKKPNKTQTNSYQYCCTCHCSSSTHQHQQQ--------- 75
           M KA KK LK  WS+ K+K K   P  +        C CHCS ST  H  Q         
Sbjct: 1   MFKAVKK-LK-FWSRKKRKRKSLAPQPSH-------CICHCSHSTSSHYYQCNYPYSPLQ 60

Query: 76  PSAPPLPPWL------NDGPTFLPPSTQS--QFEHPDTADEMVE--PLV--ANQWSYQQY 135
           PSAPPLPPWL      ++ PT      +   +F HP    + +E  P++  A   SYQQY
Sbjct: 61  PSAPPLPPWLQAELTQDEFPTLEQAEAEPFPEFSHPTDLVQDIESAPMIPAAAVPSYQQY 120

Query: 136 LVAEPVYGVPIIVETESGRGQKWKR 139
           +V+ PVYG P++ +T   + + W R
Sbjct: 121 MVSNPVYGPPVVQQTAVKKLKFWSR 136

The following BLAST results are available for this feature:

BLAST of ChyUNG228510 vs.


Match Name	E-value	Identity	Description

BLAST of ChyUNG228510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJG0	1.0e-67	94.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077760 PE=4 SV=1	[more]
A0A5A7UIP5	2.7e-47	81.45	AUX/IAA protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G0068...	[more]
A0A6J1EYP6	5.5e-16	54.24	uncharacterized protein LOC111439771 OS=Cucurbita moschata OX=3662 GN=LOC1114397...	[more]
A0A2P5XW94	3.2e-08	37.24	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12995 PE=4 SV...	[more]
A0A5D2QDC0	4.6e-07	38.52	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G118500v1 P...	[more]

BLAST of ChyUNG228510 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49708.1	9.36e-89	94.24	hypothetical protein Csa_018344 [Cucumis sativus]	[more]
KAA0054146.1	1.45e-62	81.45	AUX/IAA protein [Cucumis melo var. makuwa]	[more]
XP_022933064.1	2.64e-21	54.24	uncharacterized protein LOC111439771 [Cucurbita moschata]	[more]
KAG6601672.1	2.35e-20	53.33	hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PPS07622.1	2.23e-10	37.24	hypothetical protein GOBAR_AA12995 [Gossypium barbadense]	[more]

BLAST of ChyUNG228510 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ChyUNG228510.1	ChyUNG228510.1	mRNA