ChyUNG226920 (gene) Cucumber (hystrix) v1

Overview
NameChyUNG226920
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Locationscaffold25_size3045174: 1629583 .. 1629732 (+)
RNA-Seq ExpressionChyUNG226920
SyntenyChyUNG226920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATGAGGTACACCGGGAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGATGATCTGCCTAATGTGGTGTTGGAGTCGTTTAAACAGCTGGAGGAAGGTGAGATTAATAATTCCCCTATTAGGCCTAAAAAGGAAAAAGAG

mRNA sequence

ATGGAGAATGAGGTACACCGGGAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGATGATCTGCCTAATGTGGTGTTGGAGTCGTTTAAACAGCTGGAGGAAGGTGAGATTAATAATTCCCCTATTAGGCCTAAAAAGGAAAAAGAG

Coding sequence (CDS)

ATGGAGAATGAGGTACACCGGGAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGATGATCTGCCTAATGTGGTGTTGGAGTCGTTTAAACAGCTGGAGGAAGGTGAGATTAATAATTCCCCTATTAGGCCTAAAAAGGAAAAAGAG

Protein sequence

MENEVHREEEVRKVVFNKEDDLPNVVLESFKQLEEGEINNSPIRPKKEKE
Homology
BLAST of ChyUNG226920 vs. NCBI nr
Match: TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 3.83e-04
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 1   MENEVHREEEVRKVVFNKEDDLPN-----VVLESFKQLEEGEINNSPIRP 45
           +EN V +E  V K++  K D+L +     VVLESFKQLEEGEI +SP RP
Sbjct: 120 VENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGEIRSSPNRP 169

BLAST of ChyUNG226920 vs. NCBI nr
Match: KAA0048521.1 (uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 3.83e-04
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 1   MENEVHREEEVRKVVFNKEDDLPN-----VVLESFKQLEEGEINNSPIRP 45
           +EN V +E  V K++  K D+L +     VVLESFKQLEEGEI +SP RP
Sbjct: 120 VENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGEIRSSPNRP 169

BLAST of ChyUNG226920 vs. NCBI nr
Match: KAA0047802.1 (uncharacterized protein E6C27_scaffold133G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 46.6 bits (109), Expect = 5.20e-04
Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1   MENEVHREEEVRKVVFNKEDDL-----PNVVLESFKQLEEGEINNSPIRP 45
           +E++V +EE+V KV+ +K D+L      +VV ESFKQL+EGEI +SP RP
Sbjct: 156 VESKVQKEEDVSKVIRSKRDNLITVACEDVVQESFKQLKEGEIRSSPHRP 205

BLAST of ChyUNG226920 vs. NCBI nr
Match: TYK01614.1 (uncharacterized protein E5676_scaffold451G002130 [Cucumis melo var. makuwa])

HSP 1 Score: 46.2 bits (108), Expect = 7.08e-04
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 1   MENEVHREEEVRKVVFNKEDDLPNV-----VLESFKQLEEGEINNSPIRPKKEKE 50
           M  +  REE+V+K +  K D+L NV     VL+SFKQL+EGEI +SP RP ++ E
Sbjct: 55  MSYKCRREEDVKKDIPKKRDELANVACGEVVLKSFKQLKEGEIRSSPNRPSRQME 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK28312.13.83e-0454.00uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa][more]
KAA0048521.13.83e-0454.00uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa][more]
KAA0047802.15.20e-0452.00uncharacterized protein E6C27_scaffold133G00460 [Cucumis melo var. makuwa][more]
TYK01614.17.08e-0449.09uncharacterized protein E5676_scaffold451G002130 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ChyUNG226920.1ChyUNG226920.1mRNA