ChyUNG226910 (gene) Cucumber (hystrix) v1

Overview


Name	ChyUNG226910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DUF4283 domain-containing protein
Location	scaffold25_size3045174: 1628402 .. 1629340 (+)
RNA-Seq Expression	ChyUNG226910
Synteny	ChyUNG226910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCATGACCGATGATATCTCGGTGGTGAAGCAGCCCGCGCTGTCGATCTCAAACGTGTACGTGATGTAGGTGTTAATCGGAAAGAGACCTACTTTCTTCTTTAAATAGACATGGACAAGTGATGGGGGTTGAATCGGTTCGACTGAATCGCCTATTAGGATTTAATCCATAGTCCCGTTAGTCAAATGGGCTTCTCTTGATGATTGGAGGGCATGCCAAAAGAAAAAACTTAGGTCAGATGGGTCACAGTTTGTGATTGGGGCTAGGGATGTGGTCTAATTGAGTAATAAGTCGGTGACGTTGGATGAGCCAATTTTAGCTAATGGGCCTGAGTGTGAAAAGAGATTGGATGAGCTGAAGGTCACTAACAATGTTGGGGTAGGCACTTCAAATAGGAATTTGGCCAACGATTCAAATTCCGTGAAAAATGGTCAAGATTTTGTGCCTAGTGATGGTTCTTGTAAAAAATCAGAAGATAATGGATCAAAGTCTTCATGGGCTACCCTATTTGGTTCTTCTAGTGGTAAACCACTTCCTTATACTCGTCCTACAACCGTTGGTGATAAAATTGTTGTAGTTCCTTCTGAAGAGGTTATTGCCCAAGGAGTTTGGGTGTGGGAAAATTCCTTAATTGGGTAACTCATTGATGCAAAAATGCCTTATGCCGTTATCTATCGGCTTATTGAAAAAATATGGGGTAAAATTGAAATGCCCACGATAACGATTCTTAAGAATGAACTCATTTGTTTCCAATTCAGACGTCTAAAATCTGTTGAGTGGATCCTATCTCGTGGACCGTGGCACCTTGAGGGCAAACTTATGCTCCTCCATAAATGGACTCCAAGTATTGTCCCTGAATCATTTCTTTTCAATTTTGTTCCTGTATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGACAGATGTCTGA

mRNA sequence

ATGTCCTCCATGACCGATGATATCTCGGTGGTGAAGCAGCCCGCGCTGTCGATCTCAAACGTGAATTTGGCCAACGATTCAAATTCCGTGAAAAATGGTCAAGATTTTGTGCCTAGTGATGGTTCTTGTAAAAAATCAGAAGATAATGGATCAAAGTCTTCATGGGCTACCCTATTTGGTTCTTCTAGTGGTAAACCACTTCCTTATACTCGTCCTACAACCGTTGGTGATAAAATTGTTGTAGTTCCTTCTGAAGAGGTTATTGCCCAAGGAGTTTGGGTGTGGGAAAATTCCTTAATTGGACGTCTAAAATCTGTTGAGTGGATCCTATCTCGTGGACCGTGGCACCTTGAGGGCAAACTTATGCTCCTCCATAAATGGACTCCAAGTATTGTCCCTGAATCATTTCTTTTCAATTTTGTTCCTGTATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGACAGATGTCTGA

Coding sequence (CDS)

ATGTCCTCCATGACCGATGATATCTCGGTGGTGAAGCAGCCCGCGCTGTCGATCTCAAACGTGAATTTGGCCAACGATTCAAATTCCGTGAAAAATGGTCAAGATTTTGTGCCTAGTGATGGTTCTTGTAAAAAATCAGAAGATAATGGATCAAAGTCTTCATGGGCTACCCTATTTGGTTCTTCTAGTGGTAAACCACTTCCTTATACTCGTCCTACAACCGTTGGTGATAAAATTGTTGTAGTTCCTTCTGAAGAGGTTATTGCCCAAGGAGTTTGGGTGTGGGAAAATTCCTTAATTGGACGTCTAAAATCTGTTGAGTGGATCCTATCTCGTGGACCGTGGCACCTTGAGGGCAAACTTATGCTCCTCCATAAATGGACTCCAAGTATTGTCCCTGAATCATTTCTTTTCAATTTTGTTCCTGTATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGACAGATGTCTGA

Protein sequence

MSSMTDDISVVKQPALSISNVNLANDSNSVKNGQDFVPSDGSCKKSEDNGSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRLKSVEWILSRGPWHLEGKLMLLHKWTPSIVPESFLFNFVPVWIKLGRIPMELWTDV*

Homology

[Close]

BLAST of ChyUNG226910 vs. ExPASy TrEMBL
Match: A0A5A7TK34 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00070 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.8e-34
Identity = 78/149 (52.35%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 50  GSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL------ 109
           GS S+WA+LF +S+   LPYT P  +GDKIVVVP EEVI QG+ VWENSL+G+L      
Sbjct: 158 GSNSTWASLFRTSTEGSLPYTPPKAIGDKIVVVPPEEVIVQGIRVWENSLVGKLIDANLP 217

Query: 110 -----------------------------------KSVEWILSRGPWHLEGKLMLLHKWT 158
                                              KS+EWILSRGPWHL GK MLL KWT
Sbjct: 218 YVVIHRLVEKIWGKIEMPTITILENDLICFQFRWAKSLEWILSRGPWHLGGKPMLLRKWT 277

[Close]

BLAST of ChyUNG226910 vs. ExPASy TrEMBL
Match: A0A5D3DSG9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003060 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34
Identity = 77/150 (51.33%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 49  NGSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL----- 108
           N  KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L     
Sbjct: 144 NVPKSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKL 203

Query: 109 ------------------------------------KSVEWILSRGPWHLEGKLMLLHKW 158
                                               KSVEWILSRGPWHL GK ML  KW
Sbjct: 204 PYSVIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKW 263

[Close]

BLAST of ChyUNG226910 vs. ExPASy TrEMBL
Match: A0A5A7V507 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00710 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.5e-34
Identity = 77/150 (51.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 49  NGSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL----- 108
           N  KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L     
Sbjct: 347 NVPKSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKL 406

Query: 109 ------------------------------------KSVEWILSRGPWHLEGKLMLLHKW 158
                                               KSVEWILSRGPWHL GK ML  KW
Sbjct: 407 PYSVIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKW 466

[Close]

BLAST of ChyUNG226910 vs. ExPASy TrEMBL
Match: A0A1S3CC83 (uncharacterized protein LOC103499323 OS=Cucumis melo OX=3656 GN=LOC103499323 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.5e-34
Identity = 77/150 (51.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 49  NGSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL----- 108
           N  KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L     
Sbjct: 228 NVPKSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKL 287

Query: 109 ------------------------------------KSVEWILSRGPWHLEGKLMLLHKW 158
                                               KSVEWILSRGPWHL GK ML  KW
Sbjct: 288 PYSVIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKW 347

[Close]

BLAST of ChyUNG226910 vs. ExPASy TrEMBL
Match: A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.5e-33
Identity = 87/181 (48.07%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 18  ISNVNLANDSNSVKNGQDFVPSDGSCKKSEDNGSKSSWATLFGSSSGKPLPYTRPTTVGD 77
           + N   AN SN V+NG +        K+  D  SKS+WA+LFG+SS + L YT P  +GD
Sbjct: 269 VLNNQNANVSNVVQNGIN--------KQLID--SKSTWASLFGTSSEESLLYTLPKIIGD 328

Query: 78  KIVVVPSEEVIAQGVWVWENSLIGRL---------------------------------- 137
           KIVV P EEVI QG+ VWENSL+G+L                                  
Sbjct: 329 KIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYTVIQHLVEKIWGKIEMPIITILENDLI 388

Query: 138 -------KSVEWILSRGPWHLEGKLMLLHKWTPSIVPESFLFNFVPVWIKLGRIPMELWT 158
                  KSVEWILSRGPWHL+ K MLL KWTP IVPE F+FN VPVWI+LG++PMELWT
Sbjct: 389 CFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPGIVPEFFVFNSVPVWIRLGKLPMELWT 439

[Close]

BLAST of ChyUNG226910 vs. NCBI nr
Match: TYK26656.1 (DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (391), Expect = 4.29e-42
Identity = 76/147 (51.70%), Postives = 92/147 (62.59%), Query Frame = 0


Query: 52  KSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL-------- 111
           KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L        
Sbjct: 147 KSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKLPYS 206

Query: 112 ---------------------------------KSVEWILSRGPWHLEGKLMLLHKWTPS 157
                                            KSVEWILSRGPWHL GK ML  KWTP+
Sbjct: 207 VIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKWTPA 266

[Close]

BLAST of ChyUNG226910 vs. NCBI nr
Match: KAA0042316.1 (DUF4283 domain-containing protein [Cucumis melo var. makuwa] >TYK15440.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (392), Expect = 7.79e-42
Identity = 78/149 (52.35%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 50  GSKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL------ 109
           GS S+WA+LF +S+   LPYT P  +GDKIVVVP EEVI QG+ VWENSL+G+L      
Sbjct: 158 GSNSTWASLFRTSTEGSLPYTPPKAIGDKIVVVPPEEVIVQGIRVWENSLVGKLIDANLP 217

Query: 110 -----------------------------------KSVEWILSRGPWHLEGKLMLLHKWT 157
                                              KS+EWILSRGPWHL GK MLL KWT
Sbjct: 218 YVVIHRLVEKIWGKIEMPTITILENDLICFQFRWAKSLEWILSRGPWHLGGKPMLLRKWT 277

[Close]

BLAST of ChyUNG226910 vs. NCBI nr
Match: XP_008460524.1 (PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo])

HSP 1 Score: 154 bits (390), Expect = 2.60e-41
Identity = 76/147 (51.70%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 52  KSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL-------- 111
           KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L        
Sbjct: 231 KSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKLPYS 290

Query: 112 ---------------------------------KSVEWILSRGPWHLEGKLMLLHKWTPS 157
                                            KSVEWILSRGPWHL GK ML  KWTP 
Sbjct: 291 VIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKWTPG 350

[Close]

BLAST of ChyUNG226910 vs. NCBI nr
Match: KAA0062320.1 (DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (390), Expect = 1.13e-40
Identity = 76/147 (51.70%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 52  KSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL-------- 111
           KS+WA+LFG+++   LPYT P  +GDKIVV+P+EEVI QG+ VWENSL+G+L        
Sbjct: 350 KSTWASLFGTATEGSLPYTLPKAIGDKIVVIPTEEVIDQGIRVWENSLVGQLIDAKLPYS 409

Query: 112 ---------------------------------KSVEWILSRGPWHLEGKLMLLHKWTPS 157
                                            KSVEWILSRGPWHL GK ML  KWTP 
Sbjct: 410 VIQRLVEKICGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLGGKPMLFRKWTPG 469

[Close]

BLAST of ChyUNG226910 vs. NCBI nr
Match: XP_008463187.1 (PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo])

HSP 1 Score: 152 bits (385), Expect = 1.26e-39
Identity = 77/148 (52.03%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 51  SKSSWATLFGSSSGKPLPYTRPTTVGDKIVVVPSEEVIAQGVWVWENSLIGRL------- 110
           SKS+WA+LFG+SS + L YT P  +GDKIVV P EEVI QG+ VWENSL+G+L       
Sbjct: 110 SKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPY 169

Query: 111 ----------------------------------KSVEWILSRGPWHLEGKLMLLHKWTP 157
                                             KSVEWILSRGPWHL+ K MLL KWTP
Sbjct: 170 TVIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTP 229

[Close]

BLAST of ChyUNG226910 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 104 KSVEWILSRGPWHLEGKLMLLHKWTPSIVPESFLFNFVPVWIKLGRIPME 154
           +S+E +L RGPW     ++LL +W P I     LF F+P W+++  IP +
Sbjct: 181 ESLETVLRRGPWAFNDWMILLQRWEPQIP----LFPFIPFWVQIRGIPFQ 226

The following BLAST results are available for this feature:

BLAST of ChyUNG226910 vs.


Match Name	E-value	Identity	Description

BLAST of ChyUNG226910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TK34	3.8e-34	52.35	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DSG9	6.5e-34	51.33	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V507	8.5e-34	51.33	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3CC83	8.5e-34	51.33	uncharacterized protein LOC103499323 OS=Cucumis melo OX=3656 GN=LOC103499323 PE=...	[more]
A0A5D3D5X6	5.5e-33	48.07	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of ChyUNG226910 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26656.1	4.29e-42	51.70	DUF4283 domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0042316.1	7.79e-42	52.35	DUF4283 domain-containing protein [Cucumis melo var. makuwa] >TYK15440.1 DUF4283...	[more]
XP_008460524.1	2.60e-41	51.70	PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]	[more]
KAA0062320.1	1.13e-40	51.70	DUF4283 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_008463187.1	1.26e-39	52.03	PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]	[more]

BLAST of ChyUNG226910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G31430.1	2.8e-05	38.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 105..156 e-value: 9.5E-11 score: 41.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ChyUNG226910.1	ChyUNG226910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity