ChyUNG226340 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGGATTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATTCGACCTCACTTTGATCGCAACTCTAGAGGTTATCTTCTTACTTCTTTATTTCTTAATTCCTGCTCCTTGTTCACTAATTTCCTTCTTTTAGGGTTTGTTTTTTCTGGCGATGCGATGCGATGCCTTTTTCGCTCTTTTAGAGCGCAAAATCATATCTGGATTGCACTTGCTATGTTCGCGTTATAGATTTTCATCTTTGTTGATCTACTGTTCGATCTCTTTTTTATTATTTTGATTCATGTTTTTTGTATATTGGTTTCTCGTTTTGTAAATAATTTCAAGTTGTGAACAAGTTGTTTCTGGTACTTTTGGGGCGTTTTAACGACATCAATCTTCACCGAAACTATCGCTTCTTCTTCTTCTTCTTTCGTTTCTAAATCTTCCACTGTAAAATGTTTCTTCATCCCAAGATCATACTTTTAACTTTATTTTGATCTTTTATGTTATATCTACTTGAAGCTACGTGATATCATTCATATGCTATATTGCCGAGAATTATTCTGTTAGTACAGAAGTTTTTGTGTGAGTTGGTCAGTAGGATTATATCTTACTTTAATTCCATATTTTATGCGCTTAGAAAATTTTGAATTGGTTCTGGTGAAAGCCCACCAATATCAATATGAGGTATTTCGATTAGCAGATTTATTTTAGTTTTTCTTTTATTTGGCTGTTCGTTGGGTATAATTTATTGTTGTTGAAAGAGTGTTGTTATCCACAATGTTTAAGCCATTGTCTTCCCCGTGTAGAGTGTTTATGTTATCGGGAAGAATTTTGTTCAATTTTCTGAATTTGAATATACTATCAATAAAATTTGCTAACAGTATTTTACCTTTTTGTTGTAAGAAATAGTGTAGCATGAGTATTAGAATAAACGAACTAGGCTATAAGTGCAAAATAACTTCTTCTTATATACCACAAGGAAGTGATTGGAATTGCTACAATTACAAAATAACTTCTTCTTATGAACCATAAAGAAGTAGTGATTGAAGAATTCCAGACACTGGATAGACTTTTGAGAAAGATGCCTTTGGTAATGGGTCCTTTTTGTTGTATCCTTTGTCGGAAGGTGGAGCAAAACCTAGATCACCTTCTGGGCATGTTAGTATGCTAGTTATGTGAGAAATTGCTTCTTTAGGAGTTTGATTTTGTGTTAGCTCACCAGAGTGATATTTGTATGGTGATTGGAGAGTTTCCTCCTTCATCCTCCTTTCAAAGAGAAAGGCTGTCTTTTGTGGTTTTTGGGTGTGTTCGTTTTGTTGTGGGATCTTCAGGGGAAGAGGAAAAATAAAGTTTTTAGAGCTGTAGATCGGATCGCAAGTGAGGTTTTGTCCTTGGTGAGGTTCCATGTTTCTCGTTGGGCTTCAGTTTTGAAGAATTTTTATAATTATTCTCTGGGAAAAAATAAAATCTTACTTAGTTGTGGGGTTGGAGTTTTTCCTGTGGGTTTGGGTTTTTTTTTATGCACTTTTATTCTCTCATTTTCTTTCTCAATGAAAGCAGGTGTTTCTATAAAAAAGGAATTTCTGTTTACAATATAGTATTGTAGAGTATTTCAATTAGATGGTGGCATATTTCACTTCTAATTAAAAACTTTGTACAATCTGTTTTTCAACTTGTTTTTTTTATTCATTCCTTCTTTCTATTAAAAGAAGGTTCATTCATTGTACAGTCGCACAGAAAATACAGAACCCTATTTCTGTCGTTTTACATTCCTTTGAAATAGTGATCTTGTACACCCCAAGGAAGATGTATTTGTATATTGTTACAAAAGAACCGAAAAGTGTAGGAGTTATCTTCAAAGACCTGCTTTCTCTCCTTCCAGGTTCCACCCATTTGTCTCTAAAAAAATTAATCCTGTCCCTACTTTTAGTTTTAGTCTTGAAGTTAATTTGAAGAAAAACACACTAGTTCGTGCAATGTTGAAACAAGGTCTGCCTTTCATTTTGGTGGATGGAAAGTCCTCCCTAAAGGCTCACACCCGTGAATATTAAAGATAATCCTGTTCCATTGGCCCTGAAGTTAAATCTATTCAAACTCACGTTGAAAGTTCTTTGTTCTAGAAATTTGGGATAACAAGAACAATTACACGACCTGACTTGAACAGGATCTGTTTTATTGGTTGTACATCTGTGTATTTGAGTTCTAAGGATAACAAAAACAATTACAGAATACTTTTGTTATCTTGAGAATTTGTCTTCAATGCCTCTGTGATGATTGGTTTGTATTACACTTCTGCAAAATTGACTGGCCATTGTGGGTCAAGTTTCTGTTTCTGGATGCTTTATACAAATTAGTTGTGTGCGCACAACAAATTTCTGGATAATTTATACATGTTGTACTGCTCTAGAAGTTGTAAAAACTTTAATCCTGCATATAGGTTATAGCGACACACTCGTTCATCACTAAATTTTGTACCACTAAGCAGGCAGCATTAATTTAAGGAAGAGTGCATTCTGGCTAAAGGTGATTGATTGGGTGATAGAATTCAGTTATAGTTGTAACTCAGCCCTTTTATTATGACTTATAAGTGATTTTTCCTTTCTCCTATGTTGAAGTTTTATGATTTTTTACAAATATCTCTTTGCAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCGAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTATTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTCGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATGGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA ATGTTGAGGATTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATTCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCGAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTATTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTCGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATGGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA ATGTTGAGGATTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATTCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCGAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTATTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTCGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATGGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA MLRIAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDMGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEDNKLLIG* Homology
BLAST of ChyUNG226340 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.0e-113 Identity = 205/276 (74.28%), Postives = 234/276 (84.78%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110 Identity = 186/220 (84.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110 Identity = 202/276 (73.19%), Postives = 232/276 (84.06%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy Swiss-Prot
Match: P51135 (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 2.5e-110 Identity = 198/274 (72.26%), Postives = 231/274 (84.31%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy Swiss-Prot
Match: P37841 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-110 Identity = 202/274 (73.72%), Postives = 230/274 (83.94%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy TrEMBL
Match: A0A0A0KNC0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=3 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 6.4e-154 Identity = 270/274 (98.54%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 2.8e-149 Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy TrEMBL
Match: A0A1S3CPE6 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=3 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 2.7e-144 Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy TrEMBL
Match: A0A0A0KTT3 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=3 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.3e-142 Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of ChyUNG226340 vs. ExPASy TrEMBL
Match: A0A6J1JWJ5 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488984 PE=3 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 2.6e-139 Identity = 244/274 (89.05%), Postives = 262/274 (95.62%), Query Frame = 0
BLAST of ChyUNG226340 vs. NCBI nr
Match: XP_004143762.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51130.1 hypothetical protein Csa_007786 [Cucumis sativus]) HSP 1 Score: 550 bits (1416), Expect = 2.81e-197 Identity = 270/274 (98.54%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of ChyUNG226340 vs. NCBI nr
Match: XP_008465508.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo]) HSP 1 Score: 534 bits (1376), Expect = 3.52e-191 Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0
BLAST of ChyUNG226340 vs. NCBI nr
Match: XP_008465498.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo]) HSP 1 Score: 518 bits (1333), Expect = 1.26e-184 Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0
BLAST of ChyUNG226340 vs. NCBI nr
Match: XP_038874657.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 511 bits (1316), Expect = 5.50e-182 Identity = 251/277 (90.61%), Postives = 269/277 (97.11%), Query Frame = 0
BLAST of ChyUNG226340 vs. NCBI nr
Match: XP_004143763.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51131.1 hypothetical protein Csa_008604 [Cucumis sativus]) HSP 1 Score: 511 bits (1315), Expect = 6.99e-182 Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of ChyUNG226340 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit ) HSP 1 Score: 389.8 bits (1000), Expect = 1.8e-108 Identity = 199/280 (71.07%), Postives = 226/280 (80.71%), Query Frame = 0
BLAST of ChyUNG226340 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit ) HSP 1 Score: 385.6 bits (989), Expect = 3.4e-107 Identity = 195/275 (70.91%), Postives = 223/275 (81.09%), Query Frame = 0
BLAST of ChyUNG226340 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C ) HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09 Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0
BLAST of ChyUNG226340 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C ) HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09 Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|