ChyUNG226220 (gene) Cucumber (hystrix) v1

Overview
NameChyUNG226220
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Locationscaffold25_size3045174: 506256 .. 507259 (+)
RNA-Seq ExpressionChyUNG226220
SyntenyChyUNG226220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTCTGCAGTCTTACTACTGCCAAATTACAGCAGGTTTTAATCTTTTTTTGTATTGTATATGCCTTGATAGAGATTTTTCTATGCAATTCCTATATGGGTGTATATATATGACAACGAAATATAGTTTTTTTTTTTTTTTTTTTTTTACATTTCAAAGATTTGAGTCTATATATCAATGTTGGAGTATGACATTCCAATGAAGTTATCAATTAACCATGTACATCTGGAAAGATTACTTAAATCAAGCCTGCTTCATGATGTTTTGTAGAAGGAAGAAATTTTGTTTCTCGTCATCTTTGTCTTCAGATGCCTTTGACAAGGTTCTCCTGAAGGAAGTTGGATTGATGGAGATGACGAAACTGAGATTTTTGGAAGAAGAGGAAAGAAGATAATGAGAAATAAGTTGATTTTTTGTTTTTATTATTTATTATTCATTAAAAATTAACAAAAACAAGAACAAATCGTAAAATGACTTCTAATGATCATCTAAACCTATTTCTCAAAACTTGGATGCTAACAAAATCCATTTTCAAAACTTAGATTGACATTTTTCTATGAGCATTTTTTTAAAAAGAAATTAGAAACTAAATATGTAAAAATGACAAAATTACAAAATTTCAAAGGGAAATTTGATTGGTTGGGGGAGAAAAAGTTGAAAAAAAATGATTACTTGTTCTTGAAATTTCAAAATATTGAAGGAGTATTGTATAGTATTGTATTAATGGAGGAAGGTCCCACTGACTTTTTTCAAAAACTTTGTTTTTTGTACTCTTTCTTCAGAAATTCCTCTCTCTATAATCCCATCCTTTGTCACTGTCTCTCTCAACAGCGTCATTTTGAAATTTTCCCTGTCGTTGAGCTGCAATAGCCCTTCACTTTTTGGCGTTCGTATTTCCTCCATGCGGTTGTTGAGTTTCTCCTTTCATTCTCACCAAAACCTTACTCTTTTTCAAGCTTTCTCTGCTTCTCAATCACTGTTTCCTCGCGATTTTAGGTA

mRNA sequence

ATGGCATCTCTGCAGTCTTACTACTGCCAAATTACAGCAGATGCCTTTGACAAGGTTCTCCTGAAGGAAGTTGGATTGATGGAGATGACGAAACTGAGATTTTTGGAAGAAGAGGAAAGAAGATAATGAGAAATAAGTTGATTTTTTAAATTCCTCTCTCTATAATCCCATCCTTTGTCACTGTCTCTCTCAACAGCGTCATTTTGAAATTTTCCCTGTCGTTGAGCTGCAATAGCCCTTCACTTTTTGGCGTTCGTATTTCCTCCATGCGGTTGTTGAGTTTCTCCTTTCATTCTCACCAAAACCTTACTCTTTTTCAAGCTTTCTCTGCTTCTCAATCACTGTTTCCTCGCGATTTTAGGTA

Coding sequence (CDS)

ATGGCATCTCTGCAGTCTTACTACTGCCAAATTACAGCAGATGCCTTTGACAAGGTTCTCCTGAAGGAAGTTGGATTGATGGAGATGACGAAACTGAGATTTTTGGAAGAAGAGGAAAGAAGATAATGAGAAATAAGTTGATTTTTTAAATTCCTCTCTCTATAATCCCATCCTTTGTCACTGTCTCTCTCAACAGCGTCATTTTGAAATTTTCCCTGTCGTTGAGCTGCAATAGCCCTTCACTTTTTGGCGTTCGTATTTCCTCCATGCGGTTGTTGAGTTTCTCCTTTCATTCTCACCAAAACCTTACTCTTTTTCAAGCTTTCTCTGCTTCTCAATCACTGTTTCCTCGCGATTTTAGGTA

Protein sequence

MASLQSYYCQITADAFDKVLLKEVGLMEMTKLRFLEEEERR**EIS*FFKFLSL*SHPLSLSLSTASF*NFPCR*AAIALHFLAFVFPPCGC*VSPFILTKTLLFFKLSLLLNHCFLAILGX
Homology
[Close]
BLAST of ChyUNG226220 vs. NCBI nr
Match: KAE8648467.1 (hypothetical protein Csa_009378, partial [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 4.02e-09
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1  MASL-QSYYCQITADAFDKVLLKEVGLMEMTKLR 33
          MASL QSYYCQI ADAFDKVLLKEVGLMEMTKL+
Sbjct: 1  MASLWQSYYCQIAADAFDKVLLKEVGLMEMTKLK 34

The following BLAST results are available for this feature:
BLAST of ChyUNG226220 vs.
Match NameE-valueIdentityDescription
BLAST of ChyUNG226220 vs.
Match NameE-valueIdentityDescription
BLAST of ChyUNG226220 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648467.14.02e-0991.18hypothetical protein Csa_009378, partial [Cucumis sativus][more]
BLAST of ChyUNG226220 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ChyUNG226220.1ChyUNG226220.1mRNA