Chy9G171100 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G171100
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	60S ribosomal protein L9
Location	chrH09: 15666985 .. 15668662 (-)
RNA-Seq Expression	Chy9G171100
Synteny	Chy9G171100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACGATCCTTTCATCTGAAACTATGGATATCCCCGACGGGGTTAAAATCAAAGTTAACGCGAAAATCATTGAGGTCGAAGGCCCTCGAGGTAAACTCGTTCGCAATTTTAAGCATCTGAATCTCGATTTCCAGTTGATCACTGACGAGGCTACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACTGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACAGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATTAATGCTAGCATCACCAACACCAACAAATCCATCGAGATCCGTAACTTTCTTGGCGAGAAGAAGGTATAACTCTTTTTCTCTCGCTCTTTATCATTAATTGCATTTTCTGGATTTTGGGTACTAGACTCTTGTTTGCTGCTGCTTTTGCATTGCTTAATTGAATGCCGAATGTTTAAGGGTTAAGGGTTAAAGAATGTTTGTTTTGCTTGCTGTTTTAAACATGTTTACTTAAGAACTCCTTGCATTATGAAGTCTCATCTCTTCTGCTTTTATGATTTGTTGAGTATTTAAGATAAAAATCAAGAGCATGTTAAAATGTTTCTTTGATGGATTCTCTTTACTTGATACTCTGATTTTCTATGGGGATTGTGCCTTAGCTACGTTACTGAGAATCAATTAAAAAAAATAGTCATGAACAAACCTATTTTGCAGGATTATTCATCAGTAAATTTATTGTGGGGACATATTTTTGTTGAAAAATGTTTTCCGAATGCAACGATATAAGGTTCTGTTAATAGGAATGAAAAATTACGAAGTAGTTTGCAGGCCAACAACTCAAATTACTAAATACAAGAAGAATCCTCAAACCATTTGCTGGATTTAAATAACTGAAACATCAAATCATTCACGAGGAATCGAAATTGGAAGCTACACGCCATAAAATTAGTCACTACAACTTGCGACTACATGTATAATGCTGAATAATGAGCAACTGTAAACATTGTTTGGGTACTAGGTTGTCGAGCTAGTTTTAAGAACAATTTAGAGGGGAGAAGGTCAGATGGTTGAGGAGAATGTGAAAGAGAGGATCTTTAGACACATGACATCGAGTTTGAGTGTTCTAAAAGACAGAATTTACCGTTTGCTTTGAATACAGTCATTTGATTATTTTATCCATAGCTCAGGTACCTTATGTTCAAAACAAGTATTTTAATATATCTAGTACAAATTCCAATTGATGTTTATGAAAAATCCCATGTTTGATATGTTTTTGTTATATTTGTATGATTGGTGGATTCAATGTTTCCATTTGCTTTGTGCAATAGGTGCGTAAAGTAGATATGCTTGATGGAGTATCCATTATTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAACGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGGTATTTTCTTCACCCATGCTACATTTTGATTGGTTCTTTGTTGCAAAGCTTGTGCCTGCACAGGCGTAGTTGGTTTCATACTCACTTTTTGTTTCTTTTCTCGGTGCCAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCATGGAAGAAGAGTGA

mRNA sequence

ATGAAGACGATCCTTTCATCTGAAACTATGGATATCCCCGACGGGGTTAAAATCAAAGTTAACGCGAAAATCATTGAGGTCGAAGGCCCTCGAGGTAAACTCGTTCGCAATTTTAAGCATCTGAATCTCGATTTCCAGTTGATCACTGACGAGGCTACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACTGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACAGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATTAATGCTAGCATCACCAACACCAACAAATCCATCGAGATCCGTAACTTTCTTGGCGAGAAGAAGGTGCGTAAAGTAGATATGCTTGATGGAGTATCCATTATTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAACGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCATGGAAGAAGAGTGA

Coding sequence (CDS)

ATGAAGACGATCCTTTCATCTGAAACTATGGATATCCCCGACGGGGTTAAAATCAAAGTTAACGCGAAAATCATTGAGGTCGAAGGCCCTCGAGGTAAACTCGTTCGCAATTTTAAGCATCTGAATCTCGATTTCCAGTTGATCACTGACGAGGCTACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACTGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACAGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATTAATGCTAGCATCACCAACACCAACAAATCCATCGAGATCCGTAACTTTCTTGGCGAGAAGAAGGTGCGTAAAGTAGATATGCTTGATGGAGTATCCATTATTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAACGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCATGGAAGAAGAGTGA

Protein sequence

MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNFLGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTVMEEE*

Homology

[Close]

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 8.7e-94
Identity = 177/194 (91.24%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETM+IPDGV IKVNAK+IEVEGPRGKLVR+FKHLNLDF LITDE  GKKKLKI
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDE-NGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSIIRSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKG V+ EE
Sbjct: 181 GIYVSEKGAVVVEE 193

[Close]

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 332.4 bits (851), Expect = 3.4e-90
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I+RSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEK  ++EEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.7e-89
Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I+RSEKVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-86
Identity = 157/193 (81.35%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTIL+SETM+IP+GV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITN+N +IEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEE 194
           GIYVS+KGT+ E+
Sbjct: 181 GIYVSDKGTITED 189

[Close]

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot
Match: Q90YW0 (60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-59
Identity = 117/194 (60.31%), Postives = 145/194 (74.74%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILS++T+DIPD V + +  + + V+GPRG L R F H+NL+ +L+  +   +KKL++
Sbjct: 1   MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKK---QKKLRV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I  T   +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+   S   KDELVL+GNDIELVS SAALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+E E
Sbjct: 181 GIYVSEKGTVVEPE 191

[Close]

BLAST of Chy9G171100 vs. ExPASy TrEMBL
Match: A0A0A0KJL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy TrEMBL
Match: A0A5D3C437 (60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00890 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 190/194 (97.94%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy TrEMBL
Match: E5GBD5 (60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 190/194 (97.94%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy TrEMBL
Match: A0A1S3AUU6 (60S ribosomal protein L9 OS=Cucumis melo OX=3656 GN=LOC103482923 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 190/194 (97.94%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. ExPASy TrEMBL
Match: A0A6J1E3M6 (60S ribosomal protein L9 OS=Cucurbita moschata OX=3662 GN=LOC111430293 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.9e-100
Identity = 188/194 (96.91%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVR+VDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRRVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. NCBI nr
Match: XP_004145906.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_000354 [Cucumis sativus])

HSP 1 Score: 379 bits (974), Expect = 1.46e-132
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 194
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. NCBI nr
Match: XP_008437538.1 (PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal protein l9 [Cucumis melo subsp. melo] >KAA0042589.1 60S ribosomal protein L9 [Cucumis melo var. makuwa] >TYK05992.1 60S ribosomal protein L9 [Cucumis melo var. makuwa])

HSP 1 Score: 375 bits (963), Expect = 6.94e-131
Identity = 190/194 (97.94%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 194
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. NCBI nr
Match: KAG6579363.1 (60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016849.1 60S ribosomal protein L9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375 bits (963), Expect = 7.19e-131
Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 194
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. NCBI nr
Match: XP_038876175.1 (60S ribosomal protein L9 [Benincasa hispida])

HSP 1 Score: 375 bits (962), Expect = 9.86e-131
Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVSAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNANKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 194
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. NCBI nr
Match: XP_022922256.1 (60S ribosomal protein L9 [Cucurbita moschata])

HSP 1 Score: 374 bits (960), Expect = 2.06e-130
Identity = 188/194 (96.91%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVR+VDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRRVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 194
           GIYVSEKGTV+EEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Chy9G171100 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 332.4 bits (851), Expect = 2.4e-91
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I+RSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEK  ++EEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Chy9G171100 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 332.4 bits (851), Expect = 2.4e-91
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I+RSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEK  ++EEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Chy9G171100 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-90
Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I+RSEKVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVMEEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:

BLAST of Chy9G171100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30707	8.7e-94	91.24	60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1	[more]
P49209	3.4e-90	85.05	60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3	[more]
Q9SZX9	1.7e-89	83.51	60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1	[more]
P49210	1.3e-86	81.35	60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S...	[more]
Q90YW0	1.4e-59	60.31	60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1	[more]

BLAST of Chy9G171100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL8	1.2e-101	99.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1	[more]
A0A5D3C437	2.2e-100	97.94	60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GBD5	2.2e-100	97.94	60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3AUU6	2.2e-100	97.94	60S ribosomal protein L9 OS=Cucumis melo OX=3656 GN=LOC103482923 PE=3 SV=1	[more]
A0A6J1E3M6	4.9e-100	96.91	60S ribosomal protein L9 OS=Cucurbita moschata OX=3662 GN=LOC111430293 PE=3 SV=1	[more]

BLAST of Chy9G171100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145906.1	1.46e-132	99.48	60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_...	[more]
XP_008437538.1	6.94e-131	97.94	PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal pro...	[more]
KAG6579363.1	7.19e-131	97.42	60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_038876175.1	9.86e-131	97.42	60S ribosomal protein L9 [Benincasa hispida]	[more]
XP_022922256.1	2.06e-130	96.91	60S ribosomal protein L9 [Cucurbita moschata]	[more]

BLAST of Chy9G171100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33120.1	2.4e-91	85.05	Ribosomal protein L6 family	[more]
AT1G33140.1	2.4e-91	85.05	Ribosomal protein L6 family	[more]
AT4G10450.1	1.2e-90	83.51	Ribosomal protein L6 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020040	Ribosomal protein L6, alpha-beta domain	PFAM	PF00347	Ribosomal_L6	coord: 12..90 e-value: 3.1E-11 score: 43.8 coord: 102..181 e-value: 1.2E-11 score: 45.1
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 1..90 e-value: 8.2E-30 score: 105.1
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 91..194 e-value: 6.0E-52 score: 176.0
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 1..90
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 91..187
IPR000702	Ribosomal protein L6	PIRSF	PIRSF002162	RPL6p_RPL6a_RPL9e_RPL9o	coord: 1..190 e-value: 7.8E-31 score: 104.9
IPR000702	Ribosomal protein L6	PANTHER	PTHR11655	60S/50S RIBOSOMAL PROTEIN L6/L9	coord: 1..194
None	No IPR available	PANTHER	PTHR11655:SF40	60S RIBOSOMAL PROTEIN L9-LIKE	coord: 1..194
IPR002359	Ribosomal protein L6, conserved site-2	PROSITE	PS00700	RIBOSOMAL_L6_2	coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G171100.1	Chy9G171100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome