Chy9G170950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G170950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	30S ribosomal protein S9
Location	chrH09: 15563909 .. 15565723 (+)
RNA-Seq Expression	Chy9G170950
Synteny	Chy9G170950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGCAGGTCCTAATCGAGCATTTGGAGATCTTATTGCTGCATCAGGATTCACGGATGATATGATAGACAGTTTGATGGCTTTGAAAGATTTGGAAGGAATTGAGGGGTTGCCCCCTCTAACTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAACGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATAACAAAGGAAGAGCATATGGCACAGGTAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCCGGAAATGGCAAGTTTGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTTGATAGTCGGGCTATTCTTCTTCAACCTTTCGCTGAGACCAAAACATTAGGCCTTTGGGATGTCTCATGTACTGTTAAAGGAGGTGGTACAACGGGTAAGCTTAAGCTCACATTTAACACTTCTCGTTACGTCTTTAGATTTAGATATGTCTGTTTTTAAATTTTGTTTTCATGGTTTTTGTGTTCCGCTTGCTGTAGCCCATTTTCTTTTCACTATCCGGCATTGAGTGGGTAACACTTCTTATCACCTTGTCTTATTCTGTGTACTTTTCTCTCTTTTACGAAAAGCTTTCTTAATATTTCTTTCTCCTGCAACTGCTTTGCAACATATCAGTTTCATTGTATTACTCTTCATTTCATCACACGTGATTAAACCCGGCTATTCAGACAGAGAATATGCAAAGTTAGTGATCATGTTATGATTGAGACAAAAATATATGTTTATTAAGACTTCAGTGCAAGTTCGTTGCCATGAAATGAGTGCTGAGTGCTTAAACTTATTTGATTTTTTCTCCTACCATAAAGGTTCAAATAAATTTGAGCTTCATCATAGAATAGAATTCGTGGTCTTAATGATGCCCCACCCCTCTTTTCCAGACCTGAGTACCTCTGTTCACAGAAGAAACTTTCTTTTTTACTCCCATTCGATAAGTTCCTCATCGTTCGCCCCGTTTGGGGACACGGGATAATAAAGTTCCCCGTTGTTTGCATCACAGCTCTCTTACATTATATGACTTGGACATAAAAGTAGGTCGTTTATAACTAATTCACAATCTAAGTGCTGCCTCCTTTAACCTATTTCCATTAATACACATCTTTACTATTGGCGTCTGATCGTCTGATCATCTGATCATCTAATCATCTTATCATCTTATCATATGTTAATTAAAACTGACAGATGTAGTATACTACTTTTATCGTCATTATCATAGAAGATCTATTACTGCCAGCACCGCAGTCTAATGGTTGGATGGAAGCATTTATGCTTTTGACTATATTAGGAAGGATGCAATAGAGTTTCGACTTTACTGTTTATATGTTTATGCTTCTTCTGAAGGTTTGTCCCGTCTCTAAGTCATTGAAAGTCAACTGTTTTTGCTTCCATCTGTTTCAAATACAAATTTCCTTCTCTCTATCCTCTTCGTATGTGTTTTCCACTGACTGCATGCTCTAAATCTTCAGGTCAAGTTGGAGCTATTCAGCTGGGGATCAGCAGAGCCTTGCAGAATTGGGAACCCGAATTCCGTCCTCCATTGCGAGCAAGTAAGATGAAACGATTACACTTTTTCTTGGTTAGCTATGATGAAACTGATACACCAGCATTTTTTTTGTATTTTTACTGACCAAATTTTCTGGATTGGTAGGTGGTTTCTTGACTCGAGACGCACGTGTCGTAGAAAGAAAGAAGCCAGGTAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAG

mRNA sequence

ATGGCAACTGCAGGTCCTAATCGAGCATTTGGAGATCTTATTGCTGCATCAGGATTCACGGATGATATGATAGACAGTTTGATGGCTTTGAAAGATTTGGAAGGAATTGAGGGGTTGCCCCCTCTAACTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAACGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATAACAAAGGAAGAGCATATGGCACAGGTAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCCGGAAATGGCAAGTTTGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTTGATAGTCGGGCTATTCTTCTTCAACCTTTCGCTGAGACCAAAACATTAGGCCTTTGGGATGTCTCATGTACTGTTAAAGGAGGTGGTACAACGGGTCAAGTTGGAGCTATTCAGCTGGGGATCAGCAGAGCCTTGCAGAATTGGGAACCCGAATTCCGTCCTCCATTGCGAGCAAGTGGTTTCTTGACTCGAGACGCACGTGTCGTAGAAAGAAAGAAGCCAGGTAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAG

Coding sequence (CDS)

ATGGCAACTGCAGGTCCTAATCGAGCATTTGGAGATCTTATTGCTGCATCAGGATTCACGGATGATATGATAGACAGTTTGATGGCTTTGAAAGATTTGGAAGGAATTGAGGGGTTGCCCCCTCTAACTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAACGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATAACAAAGGAAGAGCATATGGCACAGGTAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCCGGAAATGGCAAGTTTGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTTGATAGTCGGGCTATTCTTCTTCAACCTTTCGCTGAGACCAAAACATTAGGCCTTTGGGATGTCTCATGTACTGTTAAAGGAGGTGGTACAACGGGTCAAGTTGGAGCTATTCAGCTGGGGATCAGCAGAGCCTTGCAGAATTGGGAACCCGAATTCCGTCCTCCATTGCGAGCAAGTGGTTTCTTGACTCGAGACGCACGTGTCGTAGAAAGAAAGAAGCCAGGTAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAG

Protein sequence

MATAGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR*

Homology

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BLAST of Chy9G170950 vs. ExPASy Swiss-Prot
Match: Q8L6Z4 (30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.5e-93
Identity = 167/204 (81.86%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GP+RAFGDLIA SG TD+M+DSL+ALKD +G+EGLPPLTEIE++R EK+++KSSRAEIE 
Sbjct: 227 GPDRAFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSSRAEIEL 286

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           Q QE++AKARVRQVD  GRAYGTGRRKCSIARVWIQPG GKF VN+KEFDVYFPMLD RA
Sbjct: 287 QMQEDIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRA 346

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+P AETKTLG WD+ CTVKGGGTTGQVGAIQLGISRALQNWEP+ R  LRA+GFLTR
Sbjct: 347 ALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTR 406

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 407 DSRVVERKKPGKAKARKSFQWVKR 430

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BLAST of Chy9G170950 vs. ExPASy Swiss-Prot
Match: A8I7Z9 (30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rpsI PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-38
Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 71  AKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRAILLQPF 130
           A   V+++D  GRAY TG+RK ++ARVW++PG GK +VND+  +VYF     R I+ QPF
Sbjct: 17  APVHVQKLDKFGRAYATGKRKDAVARVWVRPGTGKIIVNDRPVEVYFARPVLRLIINQPF 76

Query: 131 AETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTRDARVVE 190
           A     G +DV CTV GGG +GQ GA++ GISRAL  +EPE R PL+  GFLTRD+RVVE
Sbjct: 77  AAAAREGAYDVVCTVSGGGLSGQAGALRHGISRALTFYEPELRGPLKKGGFLTRDSRVVE 136

Query: 191 RKKPGKAKARKSFQWVKR 209
           RKK G+AKAR+SFQ+ KR
Sbjct: 137 RKKYGRAKARRSFQFSKR 154

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BLAST of Chy9G170950 vs. ExPASy Swiss-Prot
Match: A9IVX6 (30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=rpsI PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-38
Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 0


Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           +  E V    V+++D++GRAY TG+RK ++ARVWI+PG+GK ++N+KEFD YF     R 
Sbjct: 18  EPHENVVPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKIIINNKEFDKYFARPVLRM 77

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           IL QP   T     +D+  TV GGG +GQ GAI+ GIS+AL  +EPE RP L+  GFLTR
Sbjct: 78  ILRQPIVATNRDTQFDIVATVAGGGLSGQAGAIRHGISKALTYYEPELRPILKKGGFLTR 137

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKK GKAKAR+SFQ+ KR
Sbjct: 138 DSRVVERKKYGKAKARRSFQFSKR 161

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BLAST of Chy9G170950 vs. ExPASy Swiss-Prot
Match: A7INH2 (30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rpsI PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37
Identity = 74/138 (53.62%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 71  AKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRAILLQPF 130
           A   V+++D  GRAY TG+RK ++ARVW++PG GK  +ND++ +VYF     R ++ QPF
Sbjct: 23  APVHVQKLDKYGRAYATGKRKNAVARVWVRPGTGKVTINDRDIEVYFARPVLRLMINQPF 82

Query: 131 AETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTRDARVVE 190
                 G +DV CTV GGG +GQ GA++ GIS+AL  +EPE R PL+  GF+TRD+RVVE
Sbjct: 83  QAAAREGQYDVVCTVSGGGLSGQAGAVRHGISKALTYYEPELRSPLKKGGFITRDSRVVE 142

Query: 191 RKKPGKAKARKSFQWVKR 209
           RKK G+AKAR+SFQ+ KR
Sbjct: 143 RKKYGRAKARRSFQFSKR 160

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BLAST of Chy9G170950 vs. ExPASy Swiss-Prot
Match: Q6G3I7 (30S ribosomal protein S9 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) OX=283166 GN=rpsI PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-37
Identity = 78/144 (54.17%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           +  E +A   V+++D++GRAY TG+RK ++ARVWI+PG+GK  +N+KEFD YF     R 
Sbjct: 18  ETHENIAPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKITINNKEFDKYFARPVLRM 77

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           IL QP   T     +D+  TV GGG +GQ GA++ GIS+AL  +EPE R  L+  GFLTR
Sbjct: 78  ILRQPIVATNRDTQFDIIATVAGGGLSGQAGAVRHGISKALTYYEPELRTILKKGGFLTR 137

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKK GKAKAR+SFQ+ KR
Sbjct: 138 DSRVVERKKYGKAKARRSFQFSKR 161

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BLAST of Chy9G170950 vs. ExPASy TrEMBL
Match: A0A0A0KNH1 (Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER
Sbjct: 202 GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 261

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA
Sbjct: 262 QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 321

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR
Sbjct: 322 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 381

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           DARVVERKKPGKAKARKSFQWVKR
Sbjct: 382 DARVVERKKPGKAKARKSFQWVKR 405

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BLAST of Chy9G170950 vs. ExPASy TrEMBL
Match: A0A5A7TGT0 (28S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001040 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.7e-109
Identity = 200/208 (96.15%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MATAGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRA 60
           MATAGPNRAFGDLIAASG TDDMIDSLMALKDLEGIEGLPPL+EIEDMRYEKNTRKSSRA
Sbjct: 1   MATAGPNRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLSEIEDMRYEKNTRKSSRA 60

Query: 61  EIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPML 120
           EIERQKQEEVAKARVRQVD+KGRAYGTGRRKCSIARVWIQPGNGKF+VNDKEFDVYFPML
Sbjct: 61  EIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGNGKFIVNDKEFDVYFPML 120

Query: 121 DSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASG 180
           DSRA+LLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRA G
Sbjct: 121 DSRAVLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRACG 180

Query: 181 FLTRDARVVERKKPGKAKARKSFQWVKR 209
           FLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 181 FLTRDSRVVERKKPGKAKARKSFQWVKR 208

[Close]

BLAST of Chy9G170950 vs. ExPASy TrEMBL
Match: A0A1S3ATW2 (28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 195/204 (95.59%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GP+RAFGDLIAASG TDDMIDSLMALKDLEGIEGLPPL+EIEDMRYEKNTRKSSRAEIER
Sbjct: 202 GPDRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLSEIEDMRYEKNTRKSSRAEIER 261

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQVD+KGRAYGTGRRKCSIARVWIQPGNGKF+VNDKEFDVYFPMLDSRA
Sbjct: 262 QKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGNGKFIVNDKEFDVYFPMLDSRA 321

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           +LLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRA GFLTR
Sbjct: 322 VLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRACGFLTR 381

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 382 DSRVVERKKPGKAKARKSFQWVKR 405

[Close]

BLAST of Chy9G170950 vs. ExPASy TrEMBL
Match: A0A6J1I7H1 (28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471519 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 187/204 (91.67%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASG TDDM+DSL+ALKDLEG+EGLPPL+ +EDMRYEKNTRKSSRAEIER
Sbjct: 194 GPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSSRAEIER 253

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQ+D+KGRAYGTGRRKCSIARVW+QPG+GKFVVNDKEFDVYFPMLDSRA
Sbjct: 254 QKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRA 313

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRASGFLTR
Sbjct: 314 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTR 373

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 374 DSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of Chy9G170950 vs. ExPASy TrEMBL
Match: A0A6J1E6E6 (28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430383 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 187/204 (91.67%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASG TDDM+DSL+ALKDLEG+EGLPPL+ +EDMRYEKNTRKSSRAEIER
Sbjct: 194 GPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSSRAEIER 253

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQ+D+KGRAYGTGRRKCSIARVW+QPG+GKFVVNDKEFDVYFPMLDSRA
Sbjct: 254 QKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRA 313

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRASGFLTR
Sbjct: 314 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTR 373

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 374 DSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of Chy9G170950 vs. NCBI nr
Match: KAA0042604.1 (28S ribosomal protein S9 [Cucumis melo var. makuwa] >KAA0048650.1 28S ribosomal protein S9 [Cucumis melo var. makuwa] >TYK06006.1 28S ribosomal protein S9 [Cucumis melo var. makuwa])

HSP 1 Score: 400 bits (1029), Expect = 1.75e-140
Identity = 200/208 (96.15%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MATAGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRA 60
           MATAGPNRAFGDLIAASG TDDMIDSLMALKDLEGIEGLPPL+EIEDMRYEKNTRKSSRA
Sbjct: 1   MATAGPNRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLSEIEDMRYEKNTRKSSRA 60

Query: 61  EIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPML 120
           EIERQKQEEVAKARVRQVD+KGRAYGTGRRKCSIARVWIQPGNGKF+VNDKEFDVYFPML
Sbjct: 61  EIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGNGKFIVNDKEFDVYFPML 120

Query: 121 DSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASG 180
           DSRA+LLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRA G
Sbjct: 121 DSRAVLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRACG 180

Query: 181 FLTRDARVVERKKPGKAKARKSFQWVKR 208
           FLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 181 FLTRDSRVVERKKPGKAKARKSFQWVKR 208

[Close]

BLAST of Chy9G170950 vs. NCBI nr
Match: XP_004145895.1 (30S ribosomal protein S9, mitochondrial [Cucumis sativus] >KGN49932.1 hypothetical protein Csa_000657 [Cucumis sativus])

HSP 1 Score: 404 bits (1038), Expect = 7.41e-139
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER
Sbjct: 202 GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 261

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA
Sbjct: 262 QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 321

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR
Sbjct: 322 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 381

Query: 185 DARVVERKKPGKAKARKSFQWVKR 208
           DARVVERKKPGKAKARKSFQWVKR
Sbjct: 382 DARVVERKKPGKAKARKSFQWVKR 405

[Close]

BLAST of Chy9G170950 vs. NCBI nr
Match: XP_008437516.1 (PREDICTED: 28S ribosomal protein S9, mitochondrial [Cucumis melo])

HSP 1 Score: 391 bits (1005), Expect = 7.65e-134
Identity = 195/204 (95.59%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GP+RAFGDLIAASG TDDMIDSLMALKDLEGIEGLPPL+EIEDMRYEKNTRKSSRAEIER
Sbjct: 202 GPDRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLSEIEDMRYEKNTRKSSRAEIER 261

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQVD+KGRAYGTGRRKCSIARVWIQPGNGKF+VNDKEFDVYFPMLDSRA
Sbjct: 262 QKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGNGKFIVNDKEFDVYFPMLDSRA 321

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
           +LLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRA GFLTR
Sbjct: 322 VLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRACGFLTR 381

Query: 185 DARVVERKKPGKAKARKSFQWVKR 208
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 382 DSRVVERKKPGKAKARKSFQWVKR 405

[Close]

BLAST of Chy9G170950 vs. NCBI nr
Match: XP_038874636.1 (30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 383 bits (984), Expect = 9.07e-131
Identity = 189/204 (92.65%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASG TDDM+DSL+ALKDLEG+EGLPPL+EIEDMRYEKNTRKSSRAEIER
Sbjct: 194 GPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSEIEDMRYEKNTRKSSRAEIER 253

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEE+AKARVRQVD+KGRAYGTGRRKCSIARVWIQPG+GKF+VNDKEFDVYFPMLDSRA
Sbjct: 254 QKQEEIAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDSRA 313

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISRALQNWEP+ RPPLRASGFLTR
Sbjct: 314 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTR 373

Query: 185 DARVVERKKPGKAKARKSFQWVKR 208
           DARVVERKKPGKAKARKSFQWVKR
Sbjct: 374 DARVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of Chy9G170950 vs. NCBI nr
Match: KAG6579377.1 (30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (978), Expect = 7.39e-130
Identity = 187/204 (91.67%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GPNRAFGDLIAASG TDDM+DSL+ALKDLEG+EGLPPL+ +EDMRYEKNTRKSSRAEIER
Sbjct: 194 GPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSSRAEIER 253

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           QKQEEVAKARVRQ+D+KGRAYGTGRRKCSIARVW+QPG+GKFVVNDKEFDVYFPMLDSRA
Sbjct: 254 QKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRA 313

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISRALQNWEP+FRPPLRASGFLTR
Sbjct: 314 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTR 373

Query: 185 DARVVERKKPGKAKARKSFQWVKR 208
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 374 DSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of Chy9G170950 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 2.5e-94
Identity = 167/204 (81.86%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 5   GPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIER 64
           GP+RAFGDLIA SG TD+M+DSL+ALKD +G+EGLPPLTEIE++R EK+++KSSRAEIE 
Sbjct: 227 GPDRAFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSSRAEIEL 286

Query: 65  QKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRA 124
           Q QE++AKARVRQVD  GRAYGTGRRKCSIARVWIQPG GKF VN+KEFDVYFPMLD RA
Sbjct: 287 QMQEDIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRA 346

Query: 125 ILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTR 184
            LL+P AETKTLG WD+ CTVKGGGTTGQVGAIQLGISRALQNWEP+ R  LRA+GFLTR
Sbjct: 347 ALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTR 406

Query: 185 DARVVERKKPGKAKARKSFQWVKR 209
           D+RVVERKKPGKAKARKSFQWVKR
Sbjct: 407 DSRVVERKKPGKAKARKSFQWVKR 430

[Close]

BLAST of Chy9G170950 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 58/127 (45.67%), Postives = 74/127 (58.27%), Query Frame = 0


Query: 86  GTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRAILLQ----PFAETKTLGLWDV 145
           GTGRRKC+IARV +Q G GK ++N ++   Y   L    + LQ    P         +D+
Sbjct: 85  GTGRRKCAIARVVLQEGTGKVIINYRDAKEY---LQGNPLWLQYVKVPLVTLGYENSYDI 144

Query: 146 SCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTRDARVVERKKPGKAKARK 205
                GGG +GQ  AI LG++RAL     + R PL+  G LTRDARVVERKK G  KARK
Sbjct: 145 FVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARK 204

Query: 206 SFQWVKR 209
           + Q+ KR
Sbjct: 205 APQFSKR 208

The following BLAST results are available for this feature:

BLAST of Chy9G170950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6Z4	3.5e-93	81.86	30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M...	[more]
A8I7Z9	1.9e-38	57.25	30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 59...	[more]
A9IVX6	4.2e-38	55.56	30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) ...	[more]
A7INH2	3.6e-37	53.62	30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / P...	[more]
Q6G3I7	4.7e-37	54.17	30S ribosomal protein S9 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 /...	[more]

BLAST of Chy9G170950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNH1	2.5e-110	100.00	Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1	[more]
A0A5A7TGT0	3.7e-109	96.15	28S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3ATW2	1.7e-106	95.59	28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 ...	[more]
A0A6J1I7H1	2.3e-103	91.67	28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1E6E6	2.3e-103	91.67	28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Chy9G170950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042604.1	1.75e-140	96.15	28S ribosomal protein S9 [Cucumis melo var. makuwa] >KAA0048650.1 28S ribosomal ...	[more]
XP_004145895.1	7.41e-139	100.00	30S ribosomal protein S9, mitochondrial [Cucumis sativus] >KGN49932.1 hypothetic...	[more]
XP_008437516.1	7.65e-134	95.59	PREDICTED: 28S ribosomal protein S9, mitochondrial [Cucumis melo]	[more]
XP_038874636.1	9.07e-131	92.65	30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida]	[more]
KAG6579377.1	7.39e-130	91.67	30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Chy9G170950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49080.1	2.5e-94	81.86	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT1G74970.1	2.2e-21	45.67	ribosomal protein S9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 88..208 e-value: 2.8E-48 score: 163.4
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 5..208
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 76..208 e-value: 1.1E-51 score: 176.5
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 5..208
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 147..165
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 79..208 score: 28.876747
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 83..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G170950.1	Chy9G170950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome