Chy9G169970 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTGCGTCGATGCTGCTCGGTGCTCCATGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAGGCGTTCGATCAGTTTCAAATGCCTCTTCATTACCCAAGGTACAGGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTTGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGTCGGAGATGTTGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCATGTGAAATGTACTGAAATCATCACATCATTATGTCAAGAACTTTAAACTCTAAACTACGTACTATATAGTTAATTAGTATTAGCTAATTATTGTTATGTGTATGTGTTTGTGTGTGTGAAGAACTTTTTAACTTTGATAGCTTTTAGTTAACTATAAGGATATGTTTTTGTTAAGCTCTTATAAATGTTGTAATATCTTGTTTTGTTGTTCATTACTCATTTTGTCACTTTTTTAAATTTCAATCATTATAATTCTATATCTAATTAGTTCCTTTTATTAAATATCAACTTTAATTGTTTCTTCCTTTTTAGATGATAGGGTGGCAAAAAAAAAAAGGAACTTAATGTTTCGTTTCTAATCAAATTATGTGAACGATTCAATTGGCATAAAATATGTATGATAACACATTGAATTAACAAGCATTGTCATTTATGATTAATTGCTAATATTTGTTGAATAAAAATATTGTACATGTAACTTAATATTCGAATTTTATATTAACGTATAGTAATAATTTAATATATGACCAGAAGTTAGTCTCATCAATAATTGAACATATGCTTATGAGGGTATCAAATACCTCAATATTCAATATCCAACTCGTAGTAGCAGTAATAACAATAATTTAATATATGATATCATAAAGCGAATTGAATAGAAATATATCGATATATCATAATCCTTGAAAATTAGAGGTTCAATTATCTCACTTCGCAATATATAAAATAATAAAAACAAATTTAAAAATATAATTCAATTATATCTTGTTATTAAAGGTTGAAAACTCAATAAATAAATTTATAAATTTTTCGTCTTATTAATCTTAATTCAACTTAGACCACATCTTATCTTATGATACTATCTTAAATCACTAATTGACAAAAAAAAAAATTTGTTAGTAAGTGTAGATAAATTTAATTGTATATCAATAATAATGATCGGATGGGATTAAGAAAGGAAAAAAATTATAAAAATATAGTATATAAAAAGAAGCACAAAGTCTTACTTTGGTAGGTTTTGCATTTAATTTGAAAATTACTTATTTCCTTTCTCCCACGGCATCCCTATTCCATTAACATTCTACAATCGACACGAGTTTTCTGTTTGACAACTTGTCGTATAGGTTAAATTTAATCTATAATCTACTAATTTACATGCTATAAAATAAACATGATTATCTAAAGATGGTAGATAAGTTATAACAAATATTCCTAAATTTGAAGTACTCTTTCATCTTTCAAAAGTTGCTATATTGATCCATGACAGGATGCCCTATAGACTATTTCAAGAAAATCCAATAAAAGGGTATGAAAAGGGCGATTTAAACGGACATTGCAGTTGGTAAGTTACAACATTCCAAAGCAAATGAGGCTATAAAATCCATAGACCCATTGATTGAGAAGCAGACCGCCATTGCCACGCCGTCGTTCTTCTACACAGGGACTGTCAATTGGAGGGTTTGGCTAGCCCTCTCCCCCCATCCCCTTTTGACAGTTTCAAATCATTTATCAATTCACGGCCTAAATACACTTTAATTTTCTAATAATATCTCTCTCTGCTACGCCTCTCCGGACCTTTTCTTCTCAACTTTTTCAATTCTTGAGAGACGTTGCAGAGAGGTAGAGAGAGAGAGAGAGAGAGAGAGAGTGCGAGATATCTCATTCCTTCCTTTACTAATTTTCCATTACAAGCTTCTCCTTTTTTTTTTAAAACATGGCGGTCGTTGCTTGTAAGGTCCATTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTCGTCTCCGGCTCAACCGCCTGCTACTGGCGATGGTAACTTCTTCCTCTTCATCTTCATCTTCGTCTTCGTCTGATCATTTTTTAACCACACTTTTTATAACCATTTTTGTTCATCTTAACTGATGGAAAATTGTTGTAATTTTGATTTGTAGGAACAAGCATAGATCAGGGGATTGCCTACGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTATGTCAGTTTATAA ATGAGTTGCGTCGATGCTGCTCGGTGCTCCATGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAGGCGTTCGATCAGTTTCAAATGCCTCTTCATTACCCAAGGTACAGGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTTGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGTCGGAGATGTTGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCATGTGAAATGCTTTCCTCTGCTTATGCTCAATCGTCGTCTCCGGCTCAACCGCCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTACGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTATGTCAGTTTATAA ATGAGTTGCGTCGATGCTGCTCGGTGCTCCATGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAGGCGTTCGATCAGTTTCAAATGCCTCTTCATTACCCAAGGTACAGGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTTGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGTCGGAGATGTTGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCATGTGAAATGCTTTCCTCTGCTTATGCTCAATCGTCGTCTCCGGCTCAACCGCCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTACGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTATGTCAGTTTATAA MSCVDAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPVVGDVAQKRKFAMGAFLWPCEMLSSAYAQSSSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL* Homology
BLAST of Chy9G169970 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.5e-08 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.2e-07 Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06 Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29 Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 8.5e-27 Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0
BLAST of Chy9G169970 vs. ExPASy TrEMBL
Match: A0A7J9C7B6 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_007009 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 3.7e-22 Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of Chy9G169970 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 174 bits (441), Expect = 9.61e-54 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Chy9G169970 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (423), Expect = 2.89e-51 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Chy9G169970 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 137 bits (346), Expect = 2.08e-39 Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of Chy9G169970 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134 bits (338), Expect = 3.34e-38 Identity = 65/86 (75.58%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of Chy9G169970 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134 bits (336), Expect = 7.14e-38 Identity = 65/88 (73.86%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of Chy9G169970 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19 Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of Chy9G169970 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of Chy9G169970 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Chy9G169970 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Chy9G169970 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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