Chy9G169500 (gene) Cucumber (hystrix) v1

Overview
NameChy9G169500
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH09: 14409113 .. 14409631 (-)
RNA-Seq ExpressionChy9G169500
SyntenyChy9G169500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGGTGACCCATTTGCCCCATTTCTCTGTTTTTTGTTAGTGCATTATTTGGTTTTTAGTTTGTTCTGCCATTGTAATAGTGCTTTACTTGCCACTAATATTGATTGGAAAAAGTTTGTTTATCTTTCATTTTTCTAGCCCCATCAAACCCACTTTTCTTTTCTTTCCATAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCGTTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATGGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGT

mRNA sequence

ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCGTTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATGGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGT

Coding sequence (CDS)

ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCGTTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATGGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGT

Protein sequence

MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRNDMKPLEKASSLVAWPMATICLGIDGKSFTHGLKYSLFAFFTFFYLLKYVKGKAISEFC
Homology
[Close]
BLAST of Chy9G169500 vs. ExPASy TrEMBL
Match: A0A0A0KQW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-60
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60
           MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND
Sbjct: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60

Query: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHGLKYSLFAFFTFFYLLKYVKGKAISEF 117
           MKPLEKASSLVAWPMATICLGIDGKSFTH LKYSLFAFFTFFYLLKYVKGKAISEF
Sbjct: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 116

[Close]
BLAST of Chy9G169500 vs. NCBI nr
Match: KGN50091.1 (hypothetical protein Csa_000663 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 4.65e-80
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60
           MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND
Sbjct: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60

Query: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHGLKYSLFAFFTFFYLLKYVKGKAISEF 116
           MKPLEKASSLVAWPMATICLGIDGKSFTH LKYSLFAFFTFFYLLKYVKGKAISEF
Sbjct: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 116

The following BLAST results are available for this feature:
BLAST of Chy9G169500 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G169500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQW23.9e-6099.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1[more]
BLAST of Chy9G169500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50091.14.65e-8099.14hypothetical protein Csa_000663 [Cucumis sativus][more]
BLAST of Chy9G169500 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G169500.1Chy9G169500.1mRNA