Chy9G168650 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGTTGCTTTTTCACACAACCCCAGTTAACCTTTTTGATGGTTTTTTAGAAGACATTTGTTGATGGATTTTCTTTTCTTAAATTTTAGCAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK* Homology
BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.8e-07 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 9.2e-04 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.4e-41 Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 6.6e-37 Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.1e-31 Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29 Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1B3H9 (protein LITTLE ZIPPER 1-like OS=Herrania umbratica OX=108875 GN=LOC110423759 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.8e-22 Identity = 56/79 (70.89%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of Chy9G168650 vs. NCBI nr
Match: KAE8647881.1 (hypothetical protein Csa_000025 [Cucumis sativus]) HSP 1 Score: 173 bits (439), Expect = 3.89e-54 Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Chy9G168650 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata]) HSP 1 Score: 164 bits (414), Expect = 2.46e-50 Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Chy9G168650 vs. NCBI nr
Match: KAG6579456.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016928.1 Protein LITTLE ZIPPER 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160 bits (406), Expect = 4.08e-49 Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of Chy9G168650 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149 bits (375), Expect = 2.24e-44 Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Chy9G168650 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (367), Expect = 3.84e-43 Identity = 77/98 (78.57%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of Chy9G168650 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 57.4 bits (137), Expect = 7.5e-09 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Chy9G168650 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Chy9G168650 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07 Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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