Chy9G168650 (gene) Cucumber (hystrix) v1

Overview
NameChy9G168650
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein LITTLE ZIPPER 2-like
LocationchrH09: 13753067 .. 13753446 (+)
RNA-Seq ExpressionChy9G168650
SyntenyChy9G168650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGTTGCTTTTTCACACAACCCCAGTTAACCTTTTTGATGGTTTTTTAGAAGACATTTGTTGATGGATTTTCTTTTCTTAAATTTTAGCAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

mRNA sequence

ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

Coding sequence (CDS)

ATGTGCGTCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGAGGAGATGTGAAGATAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

Protein sequence

MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK*
Homology
BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTIIEENEK 66
          +S  +H    SK +  L+     +L LTRRR   K  K++E++NL+L++ENQ+II ENE 
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTRRRRLLKEQKEMEMRNLKLFVENQSIIRENEA 78

Query: 67 LREKANILHQENLALLTEFQKKF 90
          L++KA +LH EN AL      K+
Sbjct: 79 LKKKALLLHHENNALFALLHPKY 96

BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.8e-07
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0

Query: 1   MCVSATQSVLFHTIQSSKNRRSL---KRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLEN 60
           MC+S+++     T   +  R  L    +S  ++ RL+RRR   +  K +E+ NL+LY+EN
Sbjct: 44  MCLSSSE-----TFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWREEKKMEMINLKLYVEN 103

Query: 61  QTIIEENEKLREKANILHQENLALLTEFQKK 89
           Q II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 QNIIRENEKLKKKALLLHQENKTLFSLLQTK 129

BLAST of Chy9G168650 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.2e-04
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0

Query: 46 IELKNLQLYLENQTIIEENEKLREKANILHQENLALLTEFQKK 89
          +E  N +LYL+N  II+ENE+LR+KA IL+QEN  LL E ++K
Sbjct: 1  MERLNSKLYLQNCYIIKENERLRKKAQILNQENQQLLFELKQK 43

BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.4e-41
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTI 60
          MCVSATQSVLFHTIQSSKNRRS KRS FQVLRLTRRRCE+KLGKDIELKNLQLYLENQTI
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLTRRRCEEKLGKDIELKNLQLYLENQTI 60

Query: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96

BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.6e-37
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTI 60
          MC+SATQS+LFH IQ+SKNRR  KRSK QVLRLTRRRCE+KLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          I+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.1e-31
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0

Query: 1   MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRC-EDKLGKDIELKNLQLYLENQT 60
           MC+SAT+S  FH I +SKNRR LKRSK QV RLTRRRC E+K+GKDIELKNLQLYLENQT
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQT 76

Query: 61  IIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 95
           IIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  IIEENEKLRERANILHQENLALMTELQKKFQHLDR 111

BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0

Query: 1   MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLT-RRRC-EDKLGKDIELKNLQLYLENQ 60
           MC+SAT+S  FH I +SKNRR LKRSK QV RLT RRRC E+K+GKDIELKNLQLYLENQ
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQ 76

Query: 61  TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 95
           TIIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  TIIEENEKLRERANILHQENLALMTELQKKFQHLDR 112

BLAST of Chy9G168650 vs. ExPASy TrEMBL
Match: A0A6J1B3H9 (protein LITTLE ZIPPER 1-like OS=Herrania umbratica OX=108875 GN=LOC110423759 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.8e-22
Identity = 56/79 (70.89%), Postives = 71/79 (89.87%), Query Frame = 0

Query: 16 SSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTIIEENEKLREKANILH 75
          SSK R   K+SK Q+ RL+R+RCE+K+ KD+EL NL+LYLENQ+IIEENEKLR+KAN+LH
Sbjct: 14 SSKRRHRSKQSKVQIYRLSRKRCEEKVEKDMELLNLKLYLENQSIIEENEKLRKKANLLH 73

Query: 76 QENLALLTEFQKKFPHLEQ 95
          QENLAL++EFQKKFPHL++
Sbjct: 74 QENLALMSEFQKKFPHLDR 92

BLAST of Chy9G168650 vs. NCBI nr
Match: KAE8647881.1 (hypothetical protein Csa_000025 [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 3.89e-54
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLT-RRRCEDKLGKDIELKNLQLYLENQT 60
          MCVSATQSVLFHTIQSSKNRRS KRS FQVLRLT RRRCE+KLGKDIELKNLQLYLENQT
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLTSRRRCEEKLGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96
          IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97

BLAST of Chy9G168650 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata])

HSP 1 Score: 164 bits (414), Expect = 2.46e-50
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTI 60
          MC+SATQS+LFH IQ+SKNRR  KRSK QVLRLTRRRCE+KLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96
          I+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

BLAST of Chy9G168650 vs. NCBI nr
Match: KAG6579456.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016928.1 Protein LITTLE ZIPPER 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (406), Expect = 4.08e-49
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTI 60
          MC+ ATQS+LFH IQ+SKN+R  KRSK QVLRLTRRRCE+KLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96
          I+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

BLAST of Chy9G168650 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149 bits (375), Expect = 2.24e-44
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRC-EDKLGKDIELKNLQLYLENQT 60
          MC++ATQ +LFH I +SKNRR LKRSK QV RL+RRR  E+K GKDIELKNLQLYLENQT
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96
          IIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 IIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 97

BLAST of Chy9G168650 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145 bits (367), Expect = 3.84e-43
Identity = 77/98 (78.57%), Postives = 85/98 (86.73%), Query Frame = 0

Query: 1  MCVSATQSVLFHTIQSSKNRRSLKRSKFQVLRLTRRR--CEDKLGKDIELKNLQLYLENQ 60
          MC++ATQ +LFH I +SKNRR LKRSK QV RL+ RR   E+K GKDIELKNLQLYLENQ
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQ 60

Query: 61 TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96
          TIIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 TIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 98

BLAST of Chy9G168650 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 57.4 bits (137), Expect = 7.5e-09
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLENQTIIEENEK 66
          +S  +H    SK +  L+     +L LTRRR   K  K++E++NL+L++ENQ+II ENE 
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTRRRRLLKEQKEMEMRNLKLFVENQSIIRENEA 78

Query: 67 LREKANILHQENLALLTEFQKKF 90
          L++KA +LH EN AL      K+
Sbjct: 79 LKKKALLLHHENNALFALLHPKY 96

BLAST of Chy9G168650 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0

Query: 1   MCVSATQSVLFHTIQSSKNRRSL---KRSKFQVLRLTRRRCEDKLGKDIELKNLQLYLEN 60
           MC+S+++     T   +  R  L    +S  ++ RL+RRR   +  K +E+ NL+LY+EN
Sbjct: 44  MCLSSSE-----TFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWREEKKMEMINLKLYVEN 103

Query: 61  QTIIEENEKLREKANILHQENLALLTEFQKK 89
           Q II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 QNIIRENEKLKKKALLLHQENKTLFSLLQTK 129

BLAST of Chy9G168650 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLT-RRRCEDKLGKDIELKNLQLYLENQTIIEENE 66
          +S  +H    SK +  L+     +L LT RRR   K  K++E++NL+L++ENQ+II ENE
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTSRRRRLLKEQKEMEMRNLKLFVENQSIIRENE 78

Query: 67 KLREKANILHQENLALLTEFQKKF 90
           L++KA +LH EN AL      K+
Sbjct: 79 ALKKKALLLHHENNALFALLHPKY 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LZX51.1e-0742.17Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1[more]
F4IG606.8e-0741.76Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1[more]
Q56WL59.2e-0455.81Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KKF83.4e-4196.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1[more]
A0A6J1E3C56.6e-3785.42protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 ... [more]
A0A6J1E3194.1e-3180.00protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1DZF51.0e-2979.17protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1B3H97.8e-2270.89protein LITTLE ZIPPER 1-like OS=Herrania umbratica OX=108875 GN=LOC110423759 PE=... [more]
Match NameE-valueIdentityDescription
KAE8647881.13.89e-5495.88hypothetical protein Csa_000025 [Cucumis sativus][more]
XP_022922429.12.46e-5085.42protein LITTLE ZIPPER 1-like [Cucurbita moschata][more]
KAG6579456.14.08e-4983.33Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG701... [more]
XP_023534553.12.24e-4480.41protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo][more]
KAG7036101.13.84e-4378.57Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
AT3G60890.17.5e-0942.17protein binding [more]
AT2G45450.14.9e-0841.76protein binding [more]
AT3G60890.21.8e-0741.67protein binding [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..84
NoneNo IPR availablePANTHERPTHR33601:SF21OS09G0520500 PROTEINcoord: 1..93
IPR039312Protein LITTLE ZIPPERPANTHERPTHR33601PROTEIN LITTLE ZIPPER 4coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G168650.1Chy9G168650.1mRNA