Chy9G168110 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G168110
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	L-lactate dehydrogenase
Location	chrH09: 13236492 .. 13237594 (+)
RNA-Seq Expression	Chy9G168110
Synteny	Chy9G168110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACTTTTCACAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCAACCTCAAATCGCAACACCAAAATCTCCGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCAACGAACTCGTCCTCGTCGACACCAAACCCGACAAACTCCGCGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTCCTCCCGCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTAATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCAGTGAATCTAGGTTGAACCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTACTGCGGATCATCTTGACGTGAATGCTCAGAATGTTCAGGTCAGTTTTCTCATTGGCATTTCTTGTTTTTTTTTTTTTCATTTTGAAATTTACACTGAAATACTTTCCAAATTTCGGTATTCTAATGACATGATGTCTCACTTTATCCAATCATATGTTTGAAATATTCATTCTAAATTATAAGATTTTTAGTACTACATATTGAAATGATGAAATTTTATAAAGATCAGTTAAGGTAAACTTTTGTTGACAGTTAATTAGTACATCATAACGTTGACTTTAATCCATTCAATGATCAGACAAAAATTGAATTATTCACTAAAAAGAAAATTGAAATAAATTACAATAAATATACTATGTAGCTTATGGAATTCATATCCAAATCTCTTTTGCATATGGAACTCCACTCACAAATATATTTTTCTGAAGAGGAAACGATAAAGTTTTATAGCACGAGTCGGAATCTCCAGAAAGCTCTTTCGGCGTGATAATCTCCGAATTCATTCATGTAGGTAATAGCTTACATGGAATGA

mRNA sequence

ATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACTTTTCACAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCAACCTCAAATCGCAACACCAAAATCTCCGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCAACGAACTCGTCCTCGTCGACACCAAACCCGACAAACTCCGCGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTCCTCCCGCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTAATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCAGTGAATCTAGGTTGAACCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTACTGCGGATCATCTTGACGTGAATGCTCAGAATGTTCAGGTAATAGCTTACATGGAATGA

Coding sequence (CDS)

ATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACTTTTCACAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCAACCTCAAATCGCAACACCAAAATCTCCGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCAACGAACTCGTCCTCGTCGACACCAAACCCGACAAACTCCGCGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTCCTCCCGCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTGGATCTAATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCAGTGAATCTAGGTTGAACCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTACTGCGGATCATCTTGACGTGAATGCTCAGAATGTTCAGGTAATAGCTTACATGGAATGA

Protein sequence

MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLTADHLDVNAQNVQVIAYME*

Homology

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BLAST of Chy9G168110 vs. ExPASy Swiss-Prot
Match: P29038 (L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-72
Identity = 147/212 (69.34%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTS----NRNTKISVIGTGNVGMAIAQTI 60
           M+K+ S S LG    D S  FF+P+   S   TS     R TK+SVIG GNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 61  LTQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGAR 120
           LT+DL +E+ LVD  PDKLRGEMLDLQHAAAFLPRT++ + TD S+T GS+L IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 121 QIASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVI 180
           QI  E+RL+LLQRNVALF+KIVPPL + S + +LL+VSNPVDVLTYVAWKLSGFP++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 181 GSGTNLDSSRFRFLTADHLDVNAQNVQVIAYM 209
           GSGTNLDSSRFRFL A+HLDVNAQ+VQ  AYM
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQ--AYM 210

[Close]

BLAST of Chy9G168110 vs. ExPASy Swiss-Prot
Match: P22988 (L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.2e-70
Identity = 144/214 (67.29%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSN------RNTKISVIGTGNVGMAIAQ 60
           M K+ S S LG      S  FF+P+ D  P + ++      R TKISVIG GNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 61  TILTQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAG 120
           TILTQ+L +E+ LVD  PDKLRGE LDLQHAAAFLPR +IS  TD ++T  S+L IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRIS-GTDAAVTKNSDLVIVTAG 120

Query: 121 ARQIASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNR 180
           ARQI  E+RLNLLQRNVAL++KIVPP+ + SP+ +LL+VSNPVDVLTYVAWKLSGFP++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 181 VIGSGTNLDSSRFRFLTADHLDVNAQNVQVIAYM 209
           VIGSGTNLDSSRFRFL A+HLDVNAQ+VQ  AYM
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQ--AYM 211

[Close]

BLAST of Chy9G168110 vs. ExPASy Swiss-Prot
Match: P22989 (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.2e-68
Identity = 134/199 (67.34%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 16  DFSQAFFKPIRDASPLSTSN------RNTKISVIGTGNVGMAIAQTILTQDLVNELVLVD 75
           D S  FF+ + D  P++ ++      R TK+SVIG GNVGMAIAQTILTQ+L +E+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 76  TKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIASESRLNLLQR 135
             PDKLRGE LDLQHAAAFLPR +I + TD ++T  S+L +VTAGARQI  E+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 136 NVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRF 195
           NVAL++KIVPP+ + SP+ +LL+VSNPVDVLTYVAWKLSGFP++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 196 LTADHLDVNAQNVQVIAYM 209
           L A+HLDV+AQ+VQ  AYM
Sbjct: 183 LVAEHLDVSAQDVQ--AYM 199

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BLAST of Chy9G168110 vs. ExPASy Swiss-Prot
Match: Q27888 (L-lactate dehydrogenase OS=Caenorhabditis elegans OX=6239 GN=ldh-1 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.8e-52
Identity = 101/163 (61.96%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 35  NRNTKISVIGTGNVGMAIAQTILTQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKI 94
           N + K++V+G G VGMA A +IL Q+L NEL LVD   DKL+GEM+DLQH  AF     +
Sbjct: 18  NSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMMDLQHGLAFTRHCTV 77

Query: 95  SASTDYSITAGSNLCIVTAGARQIASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVS 154
            A TDYSITAGS LC+VTAGARQ   E+RL+L+QRNV +F+ I+P LV++SP+T +L+VS
Sbjct: 78  KADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLVKYSPDTCILVVS 137

Query: 155 NPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLTADHLDV 198
           NPVDVLTYV WKLSG P  RV GSGTNLDS+RFRFL ++ L++
Sbjct: 138 NPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNI 180

[Close]

BLAST of Chy9G168110 vs. ExPASy Swiss-Prot
Match: Q9W7M6 (L-lactate dehydrogenase A chain OS=Ambystoma mexicanum OX=8296 GN=LDHA PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 102/163 (62.58%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 39  KISVIGTGNVGMAIAQTILTQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DL +EL LVD   DKL+GEM+DLQH + FL   KI +  
Sbjct: 23  KITVVGVGAVGMACAMSILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGK 82

Query: 99  DYSITAGSNLCIVTAGARQIASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVD 158
           DYS+TA S L IVTAGARQ   ESRLNL+QRNV +F+ I+P +V++SP+  LL+VSNPVD
Sbjct: 83  DYSVTANSKLVIVTAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPDATLLVVSNPVD 142

Query: 159 VLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLTADHLDVNAQN 202
           VLTYVAWK+SGFP +RVIGSG NLDS+RFR+L  + L V+AQ+
Sbjct: 143 VLTYVAWKISGFPKHRVIGSGCNLDSARFRYLMGEKLGVHAQS 185

[Close]

BLAST of Chy9G168110 vs. ExPASy TrEMBL
Match: A0A1S3ATB9 (L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPSTSSLGPGGLD SQAFFKPIRDASP STSNRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGSNLCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 204
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. ExPASy TrEMBL
Match: A0A5A7T9X6 (L-lactate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00390 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 193/203 (95.07%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPS SSLGPGGLD SQAFFKPIRDASP S SNRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLSQAFFKPIRDASPPSISNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 204
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. ExPASy TrEMBL
Match: A0A0A0KKU9 (L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.1e-96
Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPSTSSLGPGGLD SQAFFKPIRDASPLSTSN NTKISVIGTGNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITA S+LCIVTAGARQIA 
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 204
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQ 265

[Close]

BLAST of Chy9G168110 vs. ExPASy TrEMBL
Match: A0A6J1K321 (L-lactate dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111491257 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 186/203 (91.63%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPS S+LGPGGLD SQAFFKPI DASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASALGPGGLDLSQAFFKPIPDASPPSTSKGNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGS+LCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SP+T LLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPDTKLLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 204
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. ExPASy TrEMBL
Match: A0A6J1H2Z1 (L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111459629 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 185/203 (91.13%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPS S+LGPGGLD SQAFFKPI DASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASALGPGGLDLSQAFFKPIPDASPPSTSKGNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           L +ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGS+LCIVT GARQIA 
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTVGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 204
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. NCBI nr
Match: XP_008437100.2 (PREDICTED: L-lactate dehydrogenase A [Cucumis melo])

HSP 1 Score: 372 bits (955), Expect = 4.95e-127
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPSTSSLGPGGLD SQAFFKPIRDASP STSNRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGSNLCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 203
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. NCBI nr
Match: KAA0039708.1 (L-lactate dehydrogenase A [Cucumis melo var. makuwa])

HSP 1 Score: 370 bits (949), Expect = 4.04e-126
Identity = 193/203 (95.07%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKSPS SSLGPGGLD SQAFFKPIRDASP S SNRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLSQAFFKPIRDASPPSISNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 203
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. NCBI nr
Match: XP_038906687.1 (L-lactate dehydrogenase A [Benincasa hispida])

HSP 1 Score: 368 bits (945), Expect = 1.64e-125
Identity = 192/203 (94.58%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLD SQAFFKPIRDASP STS RNTKISVIGTGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGS+LCI+TAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIITAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 203
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. NCBI nr
Match: XP_004151663.3 (L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 365 bits (937), Expect = 2.69e-124
Identity = 190/203 (93.60%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLD SQAFFKPIRDASP ST+NRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGS+LCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 203
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. NCBI nr
Match: KAE8647895.1 (hypothetical protein Csa_000230 [Cucumis sativus])

HSP 1 Score: 365 bits (937), Expect = 2.69e-124
Identity = 190/203 (93.60%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MQKSPSTSSLGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLD SQAFFKPIRDASP ST+NRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAS 120
           LV+ELVLVD KPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGS+LCIVTAGARQIA 
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLTADHLDVNAQNVQ 203
           NLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ 203

[Close]

BLAST of Chy9G168110 vs. TAIR 10
Match: AT4G17260.1 (Lactate/malate dehydrogenase family protein )

HSP 1 Score: 311.2 bits (796), Expect = 6.2e-85
Identity = 159/206 (77.18%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MQKSPSTSS---LGPGGLDFSQAFFKPIRDASPLSTSNRNTKISVIGTGNVGMAIAQTIL 60
           M+K+ STSS   LGP GLD + AFFKPI ++ P   SNR TK+SV+G GNVGMAIAQTIL
Sbjct: 1   MEKNASTSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTIL 60

Query: 61  TQDLVNELVLVDTKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQ 120
           TQDL +E+ LVD KPDKLRGEMLDLQHAAAFLPRTKI+AS DY +TAGS+LCIVTAGARQ
Sbjct: 61  TQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQ 120

Query: 121 IASESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIG 180
              ESRLNLLQRNVALF+ I+PPL + SP++IL+IVSNPVDVLTYVAWKLSGFP NRV+G
Sbjct: 121 NPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLG 180

Query: 181 SGTNLDSSRFRFLTADHLDVNAQNVQ 204
           SGTNLDSSRFRFL ADHLDVNAQ+VQ
Sbjct: 181 SGTNLDSSRFRFLIADHLDVNAQDVQ 206

The following BLAST results are available for this feature:

BLAST of Chy9G168110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29038	4.5e-72	69.34	L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1	[more]
P22988	7.2e-70	67.29	L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
P22989	5.2e-68	67.34	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
Q27888	6.8e-52	61.96	L-lactate dehydrogenase OS=Caenorhabditis elegans OX=6239 GN=ldh-1 PE=2 SV=1	[more]
Q9W7M6	2.2e-50	62.58	L-lactate dehydrogenase A chain OS=Ambystoma mexicanum OX=8296 GN=LDHA PE=2 SV=1	[more]

BLAST of Chy9G168110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATB9	2.0e-99	95.57	L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1	[more]
A0A5A7T9X6	1.0e-98	95.07	L-lactate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KKU9	2.1e-96	94.09	L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1	[more]
A0A6J1K321	1.1e-94	91.63	L-lactate dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111491257 PE=3 SV=1	[more]
A0A6J1H2Z1	1.5e-94	91.13	L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111459629 PE=3 SV=1	[more]

BLAST of Chy9G168110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437100.2	4.95e-127	95.57	PREDICTED: L-lactate dehydrogenase A [Cucumis melo]	[more]
KAA0039708.1	4.04e-126	95.07	L-lactate dehydrogenase A [Cucumis melo var. makuwa]	[more]
XP_038906687.1	1.64e-125	94.58	L-lactate dehydrogenase A [Benincasa hispida]	[more]
XP_004151663.3	2.69e-124	93.60	L-lactate dehydrogenase A-like [Cucumis sativus]	[more]
KAE8647895.1	2.69e-124	93.60	hypothetical protein Csa_000230 [Cucumis sativus]	[more]

BLAST of Chy9G168110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17260.1	6.2e-85	77.18	Lactate/malate dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 175..193 score: 66.28 coord: 39..63 score: 45.23 coord: 64..88 score: 51.41 coord: 151..171 score: 71.81
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 38..177 e-value: 1.1E-40 score: 139.0
None	No IPR available	GENE3D	3.40.50.720		coord: 34..179 e-value: 6.0E-57 score: 193.7
None	No IPR available	PANTHER	PTHR43128	L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))	coord: 1..205
None	No IPR available	PANTHER	PTHR43128:SF23	L-LACTATE DEHYDROGENASE	coord: 1..205
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 25..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G168110.1	Chy9G168110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor