Chy9G165310 (gene) Cucumber (hystrix) v1

Overview
NameChy9G165310
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionB3 domain-containing protein At2g31420-like
LocationchrH09: 10868526 .. 10869204 (+)
RNA-Seq ExpressionChy9G165310
SyntenyChy9G165310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGCTTTAGAATCTGTCTTCAACTTCCTGATTTAAACAATGTTTACATACCTCGGAAAAGACGTGGATCTTCCTCCGGCCTCGGCAAAAAATCCATGACTGAAACCCAACTCCCCGGGGAGGCTGCGATTCTAATTCAACTGGCAAACTCTGTTCCTGATGTTCAACCGCAAAAATTCAACAAAACCCACAAGAGAAAAAATCCTCCGACCGGCATCAACGAGAAACAGAGAAAAGAGAAGAAGAATGTACAAGTGAGCGTCCGCCGATGCCCGGTGACGATGAGAGATCGGATTCTAGAGATGGTGGGTATGAAATAAACCCTAGTGATTCAAAAACAACTTGCTGATACGGATTTAAACAAAAACCGTCGTTTGTCGATGAACAAAACACTACTATCGTTTGATTTTGCAACCCGAGGAAGAGAGTCAGTTACTGAGCGAACAAAAAATAAGAACAAGAGGGGGATAAACGTAATGATATTGGACGATGTTCTAGAAGGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGAGAGAAGTTTACTGTTTGATGAGACATTGGAATTCGATGTGAAAAAAGGGGATTCAAGAGTGGAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTGGTATAG

mRNA sequence

ATGGGTGGCTTTAGAATCTGTCTTCAACTTCCTGATTTAAACAATGTTTACATACCTCGGAAAAGACGTGGATCTTCCTCCGGCCTCGGCAAAAAATCCATGACTGAAACCCAACTCCCCGGGGAGGCTGCGATTCTAATTCAACTGGCAAACTCTGTTCCTGATGTTCAACCGCAAAAATTCAACAAAACCCACAAGAGAAAAAATCCTCCGACCGGCATCAACGAGAAACAGAGAAAAGAGAAGAAGAATGTACAAGTGAGCGTCCGCCGATGCCCGGTGACGATGAGAGATCGGATTCTAGAGATGAAGGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGAGAGAAGTTTACTGTTTGATGAGACATTGGAATTCGATGTGAAAAAAGGGGATTCAAGAGTGGAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTGGTATAG

Coding sequence (CDS)

ATGGGTGGCTTTAGAATCTGTCTTCAACTTCCTGATTTAAACAATGTTTACATACCTCGGAAAAGACGTGGATCTTCCTCCGGCCTCGGCAAAAAATCCATGACTGAAACCCAACTCCCCGGGGAGGCTGCGATTCTAATTCAACTGGCAAACTCTGTTCCTGATGTTCAACCGCAAAAATTCAACAAAACCCACAAGAGAAAAAATCCTCCGACCGGCATCAACGAGAAACAGAGAAAAGAGAAGAAGAATGTACAAGTGAGCGTCCGCCGATGCCCGGTGACGATGAGAGATCGGATTCTAGAGATGAAGGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGAGAGAAGTTTACTGTTTGATGAGACATTGGAATTCGATGTGAAAAAAGGGGATTCAAGAGTGGAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTGGTATAG

Protein sequence

MGGFRICLQLPDLNNVYIPRKRRGSSSGLGKKSMTETQLPGEAAILIQLANSVPDVQPQKFNKTHKRKNPPTGINEKQRKEKKNVQVSVRRCPVTMRDRILEMKERMVCLKKWKIGSERSLLFDETLEFDVKKGDSRVERFKFGASEKMMKMKLIVFAWLV*
Homology
[Close]
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match: A0A5A7TY85 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00670 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.1e-26
Identity = 78/115 (67.83%), Postives = 84/115 (73.04%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP----GEAAILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP      A+ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 104
           VQ QK NKTHKRKNPP      T   EKQR  KKNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTEKQR--KKNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match: A0A5A7TWX2 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00300 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25
Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP----GEAAILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP      A+ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP----TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 104
           VQ QK NKTHKRKNPP       ++ +++ KKNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match: A0A5D3CTW9 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00340 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25
Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP----GEAAILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP      A+ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP----TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 104
           VQ QK NKTHKRKNPP       ++ +++ KKNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match: A0A5D3E3Y5 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00650 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25
Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP----GEAAILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP      A+ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP----TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 104
           VQ QK NKTHKRKNPP       ++ +++ KKNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match: A0A5A7TS79 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001480 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25
Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP----GEAAILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP      A+ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP----TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 104
           VQ QK NKTHKRKNPP       ++ +++ KKNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. NCBI nr
Match: KAA0046355.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (314), Expect = 3.75e-32
Identity = 80/115 (69.57%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP---GEAA-ILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP    EAA ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 103
           VQ QK NKTHKRKNPP      T   EKQRK  KNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTEKQRK--KNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. NCBI nr
Match: TYK14658.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 1.19e-31
Identity = 79/115 (68.70%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP---GEAA-ILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP    EAA ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 103
           VQ QK NKTHKRKNPP      T   +KQRK  KNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRK--KNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. NCBI nr
Match: KAA0046407.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYK14654.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 1.48e-31
Identity = 79/115 (68.70%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP---GEAA-ILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP    EAA ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 103
           VQ QK NKTHKRKNPP      T   +KQRK  KNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRK--KNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. NCBI nr
Match: TYK30519.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 1.48e-31
Identity = 79/115 (68.70%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP---GEAA-ILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP    EAA ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 103
           VQ QK NKTHKRKNPP      T   +KQRK  KNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRK--KNVDQSEIPSMPVTMRDRILEM 121

[Close]
BLAST of Chy9G165310 vs. NCBI nr
Match: KAA0046403.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 1.48e-31
Identity = 79/115 (68.70%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 2   GGFRICLQLPDLNNVYIPRKRRGSSSGLGKK--SMTETQLP---GEAA-ILIQLANSVPD 61
           GG RIC  LPDL+N+YIPRKRRGSSSG GKK  S+TET+LP    EAA ILIQLANSVPD
Sbjct: 9   GGLRICHHLPDLDNIYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPD 68

Query: 62  VQPQKFNKTHKRKNPP------TGINEKQRKEKKNV-QVSVRRCPVTMRDRILEM 103
           VQ QK NKTHKRKNPP      T   +KQRK  KNV Q  +   PVTMRDRILEM
Sbjct: 69  VQRQKLNKTHKRKNPPIPTEASTSKTKKQRK--KNVDQSEIPSMPVTMRDRILEM 121

The following BLAST results are available for this feature:
BLAST of Chy9G165310 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G165310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TY855.1e-2667.83Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7TWX21.9e-2564.60Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3CTW91.9e-2564.60Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3E3Y51.9e-2564.60Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7TS791.9e-2564.60Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
BLAST of Chy9G165310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046355.13.75e-3269.57putative B3 domain-containing protein [Cucumis melo var. makuwa][more]
TYK14658.11.19e-3168.70putative B3 domain-containing protein [Cucumis melo var. makuwa][more]
KAA0046407.11.48e-3168.70putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYK14654.1 put... [more]
TYK30519.11.48e-3168.70putative B3 domain-containing protein [Cucumis melo var. makuwa][more]
KAA0046403.11.48e-3168.70putative B3 domain-containing protein [Cucumis melo var. makuwa][more]
BLAST of Chy9G165310 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G165310.1Chy9G165310.1mRNA