Chy9G164820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G164820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transposase
Location	chrH09: 10320591 .. 10321254 (+)
RNA-Seq Expression	Chy9G164820
Synteny	Chy9G164820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTGTAAGGTCTAGATTGTGTGAAACTTTTCAGGTATATTACTTTCTCACTAACAAATATATTTGTAAGGTCTAGATTGTGTGTTACTTTCTCACTAACAATATATTTGAAAATAGGAAAAAAGAAAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATGGTAAGAATTAATTTATGTTCTCATAATTATTAAGTTTATCAAACTTTATCATAGGTTATACTAATCTTATTATGGAATTGGAATGTAGAAAAAGGAAGGTTCAAATGAAGCGGATTTGGATCGAGCCATCATGTGGAAGAAAGCTCGAGTTAACAAAAAAGGGGAGTATGACAAAGACGATGTTCAGCAAGTCGTCCATAAAATTGTAAGACTTTTTGTAGATTACACATTTGAACTAACCATACATAAGCATTTCTATAACTTAGATTGGTTTTGTTACCGTTTTAGGATGAGATTTCAATGAATACAAATTCATCGTCTAAAAAAGCACACTCTTCTCATGATGTCTTAACTCAAGCATTGGATACAAAAGAGCATCATGGTCGTGTTCGTGGGGTCGGTGGGTATGTTACTCCTACCACTTACTTTCATTGTGTAAAAAAGACATCAAA

mRNA sequence

GAATTTGTAAGGTCTAGATTGTGTGAAACTTTTCAGGAAAAAAGAAAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATGAAAAAGGAAGGTTCAAATGAAGCGGATTTGGATCGAGCCATCATGTGGAAGAAAGCTCGAGTTAACAAAAAAGGGGAGTATGACAAAGACGATGTTCAGCAAGTCGTCCATAAAATTGATGAGATTTCAATGAATACAAATTCATCGTCTAAAAAAGCACACTCTTCTCATGATGTCTTAACTCAAGCATTGGATACAAAAGAGCATCATGGTCGTGTTCGTGGGGTCGGTGGGTATGTTACTCCTACCACTTACTTTCATTGTGTAAAAAAGACATCAAA

Coding sequence (CDS)

GAATTTGTAAGGTCTAGATTGTGTGAAACTTTTCAGGAAAAAAGAAAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATGAAAAAGGAAGGTTCAAATGAAGCGGATTTGGATCGAGCCATCATGTGGAAGAAAGCTCGAGTTAACAAAAAAGGGGAGTATGACAAAGACGATGTTCAGCAAGTCGTCCATAAAATTGATGAGATTTCAATGAATACAAATTCATCGTCTAAAAAAGCACACTCTTCTCATGATGTCTTAACTCAAGCATTGGATACAAAAGAGCATCATGGTCGTGTTCGTGGGGTCGGTGGGTATGTTACTCCTACCACTTACTTTCATTGTGTAAAAAAGACATCAAA

Protein sequence

EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWKKARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVGGYVTPTTYFHCVKKTSX

Homology

[Close]

BLAST of Chy9G164820 vs. ExPASy TrEMBL
Match: A0A5A7V0G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00370 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.4e-53
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEM K GSNE  +DRA MWK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEM-KGGSNEVYVDRAKMWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+GRVRGVG
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVG 278

Query: 121 GYVTPTTYFHCVKKTS 137
           GYVTPTTYFH VKKTS
Sbjct: 279 GYVTPTTYFHSVKKTS 293

[Close]

BLAST of Chy9G164820 vs. ExPASy TrEMBL
Match: A0A5A7V2Z2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00510 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.7e-52
Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGY NL EEM KEGSNE  +DRA +WK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYVNLKEEM-KEGSNEVYVDRAKLWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+ RVRGVG
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNARVRGVG 278

Query: 121 GYVTPTTYFHCVKKTS 137
           GYVTPTTYFH VKKTS
Sbjct: 279 GYVTPTTYFHSVKKTS 293

[Close]

BLAST of Chy9G164820 vs. ExPASy TrEMBL
Match: A0A5A7SSM9 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00640 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.8e-52
Identity = 113/137 (82.48%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEM KEGSNE  +DRA MWK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEM-KEGSNEVYVDRAKMWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKI-DEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGV 120
           KARVNK+G+YD DD+QQVVHKI +EISMNT+SSS   H S+DVLTQAL TKEH+GRVRGV
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIVNEISMNTDSSSMNRHCSNDVLTQALGTKEHNGRVRGV 278

Query: 121 GGYVTPTTYFHCVKKTS 137
           GGYVTPTTYFH +KKTS
Sbjct: 279 GGYVTPTTYFHSIKKTS 294

[Close]

BLAST of Chy9G164820 vs. ExPASy TrEMBL
Match: A0A5A7UWH7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00030 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEM  +GSNE  +DRA +WK
Sbjct: 347 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEM--DGSNEVYVDRAKLWK 406

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+ +YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+GRVRGVG
Sbjct: 407 KARVNKQEQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVG 466

Query: 121 GYVTPTTYFHCVKKTS 137
           GYVTPTTYFH VKKTS
Sbjct: 467 GYVTPTTYFHSVKKTS 480

[Close]

BLAST of Chy9G164820 vs. ExPASy TrEMBL
Match: A0A5A7U8E8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001350 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRK YANL EEM K+GSNE  +DRA +WK
Sbjct: 594 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKRYANLKEEM-KDGSNEVYVDRAKLWK 653

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+GRVRGVG
Sbjct: 654 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVG 713

Query: 121 GYVTPTTYFHCVKKTS 137
           GYVTP TYFH VKKTS
Sbjct: 714 GYVTPKTYFHSVKKTS 728

[Close]

BLAST of Chy9G164820 vs. NCBI nr
Match: XP_031741710.1 (uncharacterized protein LOC116403905 [Cucumis sativus])

HSP 1 Score: 232 bits (591), Expect = 2.73e-74
Identity = 120/136 (88.24%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRLCETFQEKR LQQDR+SKNKYNHRISRKGYANLIEEMKKEGSN+ +LDRAIMWK
Sbjct: 27  EFVRSRLCETFQEKRLLQQDRRSKNKYNHRISRKGYANLIEEMKKEGSNQKELDRAIMWK 86

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNKKGEY+ DDVQQVVHKIDEISMNT+SSS+K HSS+DVLTQAL TKEH+GRV GVG
Sbjct: 87  KARVNKKGEYENDDVQQVVHKIDEISMNTSSSSQKGHSSNDVLTQALGTKEHNGRVCGVG 146

Query: 121 GYVTPTTYFHCVKKTS 136
           GYVTPT YFH VKKTS
Sbjct: 147 GYVTPTNYFHSVKKTS 162

[Close]

BLAST of Chy9G164820 vs. NCBI nr
Match: KAA0032239.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (532), Expect = 5.95e-63
Identity = 113/137 (82.48%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEMK EGSNE  +DRA MWK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMK-EGSNEVYVDRAKMWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKI-DEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGV 120
           KARVNK+G+YD DD+QQVVHKI +EISMNT+SSS   H S+DVLTQAL TKEH+GRVRGV
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIVNEISMNTDSSSMNRHCSNDVLTQALGTKEHNGRVRGV 278

Query: 121 GGYVTPTTYFHCVKKTS 136
           GGYVTPTTYFH +KKTS
Sbjct: 279 GGYVTPTTYFHSIKKTS 294

[Close]

BLAST of Chy9G164820 vs. NCBI nr
Match: KAA0060814.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (542), Expect = 6.34e-63
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEMK  GSNE  +DRA MWK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMK-GGSNEVYVDRAKMWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+GRVRGVG
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVG 278

Query: 121 GYVTPTTYFHCVKKTS 136
           GYVTPTTYFH VKKTS
Sbjct: 279 GYVTPTTYFHSVKKTS 293

[Close]

BLAST of Chy9G164820 vs. NCBI nr
Match: KAA0048294.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 7.46e-63
Identity = 111/136 (81.62%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVR RL ETFQEKRKLQQDR+SKNKYNHRISRKGYANL EEMK EGSNE  +DRA MWK
Sbjct: 79  EFVRLRLSETFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMK-EGSNEVYVDRAKMWK 138

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+ RVRG+G
Sbjct: 139 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNDRVRGIG 198

Query: 121 GYVTPTTYFHCVKKTS 136
           GYVT TTYFH VKKTS
Sbjct: 199 GYVTLTTYFHSVKKTS 213

[Close]

BLAST of Chy9G164820 vs. NCBI nr
Match: KAA0060131.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (536), Expect = 2.01e-62
Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   EFVRSRLCETFQEKRKLQQDRQSKNKYNHRISRKGYANLIEEMKKEGSNEADLDRAIMWK 60
           EFVRSRL ETFQEKRKLQQDR+SKNKYNHRISRKGY NL EEMK EGSNE  +DRA +WK
Sbjct: 159 EFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRKGYVNLKEEMK-EGSNEVYVDRAKLWK 218

Query: 61  KARVNKKGEYDKDDVQQVVHKIDEISMNTNSSSKKAHSSHDVLTQALDTKEHHGRVRGVG 120
           KARVNK+G+YD DD+QQVVHKIDEISMNT+SSS   H S+DVLTQAL TKEH+ RVRGVG
Sbjct: 219 KARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKEHNARVRGVG 278

Query: 121 GYVTPTTYFHCVKKTS 136
           GYVTPTTYFH VKKTS
Sbjct: 279 GYVTPTTYFHSVKKTS 293

The following BLAST results are available for this feature:

BLAST of Chy9G164820 vs.


Match Name	E-value	Identity	Description

BLAST of Chy9G164820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0G8	5.4e-53	83.82	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7V2Z2	2.7e-52	82.35	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7SSM9	7.8e-52	82.48	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UWH7	1.3e-51	81.62	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00030 PE...	[more]
A0A5A7U8E8	1.7e-51	81.62	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Chy9G164820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741710.1	2.73e-74	88.24	uncharacterized protein LOC116403905 [Cucumis sativus]	[more]
KAA0032239.1	5.95e-63	82.48	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0060814.1	6.34e-63	83.82	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0048294.1	7.46e-63	81.62	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0060131.1	2.01e-62	82.35	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]

BLAST of Chy9G164820 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 13..125 e-value: 2.9E-9 score: 37.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G164820.1	Chy9G164820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016301	kinase activity