Chy9G164360 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G164360
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	nucleolar complex protein 2 homolog
Location	chrH09: 9631359 .. 9631992 (-)
RNA-Seq Expression	Chy9G164360
Synteny	Chy9G164360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGCAGTTTAATTTATCCCTTTATTTGGAAGATTTTCAGGATCCAGAATTCTTGAAGTTTCTGGAAACCAATAATAAGGCTGTTGAACCTTTCGGAGATGAAGGCACTGTAGGTAATATGTAGGGTGCTGTATTTCTTGGTGCCAAGTTTGAAGTTCTAATTTTGGTTATGAACGATTTGTTTAATCATGTAGAAACAAGCTCTGTTAGCCAATTGTGTTTTAATGTCTTTTTTTAATTTCTTTCAATCTAATTGTTTCCTTGAACAGAGTTTTGATGAGGAAACAATCAATGCTGATGGATTAAAGCGAGATGAACAGAGTGTTAGTTCTAATAAAAACTTGTTGAGTTCCTCTGTCGTTGATTCCTGGTGTCATCAAGTCAAGAACAAGCAGGATTTGCCTCTATTTACCAGTCTAATAAATGGGTATCGAGCTGCATGTCACTATGGATCTGAAGCAATAGGCAACGTAGATGCTGGCAGATGTTATAAAATTGGAAACAGTGAAACTTTCTCCAAGATATTAATTTTCATGCTTTCTGAGGGTGACAATTTATTTAGGGGGCAGCTAGGAATCTTGACTAAGAGCTATAAGAAGGAAATGATTTTAGAATTGAGAAACACCTAA

mRNA sequence

ATGGCTGGGCAGTTTAATTTATCCCTTTATTTGGAAGATTTTCAGGATCCAGAATTCTTGAAGTTTCTGGAAACCAATAATAAGGCTGTTGAACCTTTCGGAGATGAAGGCACTAGTTTTGATGAGGAAACAATCAATGCTGATGGATTAAAGCGAGATGAACAGAGTGTTAGTTCTAATAAAAACTTGTTGAGTTCCTCTGTCGTTGATTCCTGGTGTCATCAAGTCAAGAACAAGCAGGATTTGCCTCTATTTACCAGTCTAATAAATGGGTATCGAGCTGCATGTCACTATGGATCTGAAGCAATAGGCAACGTAGATGCTGGCAGATGTTATAAAATTGGAAACAGTGAAACTTTCTCCAAGATATTAATTTTCATGCTTTCTGAGGGTGACAATTTATTTAGGGGGCAGCTAGGAATCTTGACTAAGAGCTATAAGAAGGAAATGATTTTAGAATTGAGAAACACCTAA

Coding sequence (CDS)

ATGGCTGGGCAGTTTAATTTATCCCTTTATTTGGAAGATTTTCAGGATCCAGAATTCTTGAAGTTTCTGGAAACCAATAATAAGGCTGTTGAACCTTTCGGAGATGAAGGCACTAGTTTTGATGAGGAAACAATCAATGCTGATGGATTAAAGCGAGATGAACAGAGTGTTAGTTCTAATAAAAACTTGTTGAGTTCCTCTGTCGTTGATTCCTGGTGTCATCAAGTCAAGAACAAGCAGGATTTGCCTCTATTTACCAGTCTAATAAATGGGTATCGAGCTGCATGTCACTATGGATCTGAAGCAATAGGCAACGTAGATGCTGGCAGATGTTATAAAATTGGAAACAGTGAAACTTTCTCCAAGATATTAATTTTCATGCTTTCTGAGGGTGACAATTTATTTAGGGGGCAGCTAGGAATCTTGACTAAGAGCTATAAGAAGGAAATGATTTTAGAATTGAGAAACACCTAA

Protein sequence

MAGQFNLSLYLEDFQDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNLLSSSVVDSWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDNLFRGQLGILTKSYKKEMILELRNT*

Homology

[Close]

BLAST of Chy9G164360 vs. ExPASy Swiss-Prot
Match: Q9ZPV5 (Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At2g18220 PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 16  DPEFLKFLET---NNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNLLSSSVVDSW 75
           D E LKF  T   ++  VEP  D      E+  + +  K +       +  +++S+VD+W
Sbjct: 81  DAELLKFDATEIEDDADVEP--DTDLEDTEKEGDDEATKMEIAKKVHVQKTITASMVDAW 140

Query: 76  CHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGD 135
              ++++  L    S++  YR ACHYG +     D    + + +SE F+KI+I++LSE D
Sbjct: 141 SKSIEDEAKLGGVRSILRAYRTACHYGDDT--GDDQSTKFSVMSSEVFNKIMIYVLSEMD 200

Query: 136 NLFRGQLGILTKSY-KKEMILELRNT 158
            + R  L     +   KE ILEL NT
Sbjct: 201 GILRKLLRFPEDTRGTKETILELTNT 222

[Close]

BLAST of Chy9G164360 vs. ExPASy Swiss-Prot
Match: Q8LNU5 (Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0495500 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 43/146 (29.45%), Postives = 73/146 (50.00%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNL---LSSSVVDS 74
           +DPEF K+LE  +K +  F D+   FD+   +A+  K         K +   ++  +VDS
Sbjct: 49  KDPEFYKYLEECDKELLEFDDD--DFDDNEGSAE--KHSSVPKEEPKEIVKPITMQMVDS 108

Query: 75  WCHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEG 134
           WC   ++ + +    S++  +R ACHYG E+ GN  A + + + +     K++ F+L   
Sbjct: 109 WCQGAEDGK-IGSIRSILEAFRKACHYGEES-GNNSAPK-FSVMSGSVLDKVMHFVLKNM 168

Query: 135 DNLFRGQLGILTKSYKKEMILELRNT 158
           D + R  L   +   KKE + EL  T
Sbjct: 169 DRILRELLDAPSFGGKKETVSELMIT 187

[Close]

BLAST of Chy9G164360 vs. ExPASy TrEMBL
Match: A0A1S4E491 (nucleolar complex protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103501701 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 135/147 (91.84%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 12  EDFQDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVD 71
           +DFQDPEFLKFLETNNKAVEPF DE TS DEETINADGLKR+E+SVSSNKN LL+SSVVD
Sbjct: 97  KDFQDPEFLKFLETNNKAVEPFRDEDTSSDEETINADGLKRNERSVSSNKNLLLTSSVVD 156

Query: 72  SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSE 131
           SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAI NVDAGRCYKIGNSETFSKILIFMLSE
Sbjct: 157 SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIDNVDAGRCYKIGNSETFSKILIFMLSE 216

Query: 132 GDNLFRGQLGILTKSYKKEMILELRNT 158
            DNLFR QLG+LTKSYKKEMILELRNT
Sbjct: 217 ADNLFREQLGLLTKSYKKEMILELRNT 243

[Close]

BLAST of Chy9G164360 vs. ExPASy TrEMBL
Match: A0A0A0LC17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G215640 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.3e-68
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLETNNKAVEPF DE T+ DEETINADGLKRDEQSVSSNKN LLSSSVVDSWC
Sbjct: 144 KDPEFLKFLETNNKAVEPFRDEDTNSDEETINADGLKRDEQSVSSNKNLLLSSSVVDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQD+PLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDVPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 158
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 287

[Close]

BLAST of Chy9G164360 vs. ExPASy TrEMBL
Match: A0A5D3CVA0 (Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00040 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 175 EDPEFLKFLET-YKAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 234

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 235 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 294

Query: 135 LFRGQLGILTKSYKKEMILELRNT 158
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 295 LFREQLGLLTKSYKKEMILELRNT 317

[Close]

BLAST of Chy9G164360 vs. ExPASy TrEMBL
Match: A0A5A7TCF4 (Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001830 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 144 KDPEFLKFLET-YKAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 158
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 286

[Close]

BLAST of Chy9G164360 vs. ExPASy TrEMBL
Match: A0A1S4E108 (LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103496135 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 144 KDPEFLKFLET-YKAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 158
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 286

[Close]

BLAST of Chy9G164360 vs. NCBI nr
Match: XP_016903037.1 (PREDICTED: nucleolar complex protein 2 homolog [Cucumis melo])

HSP 1 Score: 265 bits (677), Expect = 4.79e-82
Identity = 135/147 (91.84%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 12  EDFQDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNLL-SSSVVD 71
           +DFQDPEFLKFLETNNKAVEPF DE TS DEETINADGLKR+E+SVSSNKNLL +SSVVD
Sbjct: 97  KDFQDPEFLKFLETNNKAVEPFRDEDTSSDEETINADGLKRNERSVSSNKNLLLTSSVVD 156

Query: 72  SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSE 131
           SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAI NVDAGRCYKIGNSETFSKILIFMLSE
Sbjct: 157 SWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIDNVDAGRCYKIGNSETFSKILIFMLSE 216

Query: 132 GDNLFRGQLGILTKSYKKEMILELRNT 157
            DNLFR QLG+LTKSYKKEMILELRNT
Sbjct: 217 ADNLFREQLGLLTKSYKKEMILELRNT 243

[Close]

BLAST of Chy9G164360 vs. NCBI nr
Match: XP_011651274.1 (nucleolar complex protein 2 homolog [Cucumis sativus] >XP_011651275.1 nucleolar complex protein 2 homolog [Cucumis sativus] >KGN57576.1 hypothetical protein Csa_010953 [Cucumis sativus])

HSP 1 Score: 263 bits (673), Expect = 4.53e-81
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNLL-SSSVVDSWC 74
           +DPEFLKFLETNNKAVEPF DE T+ DEETINADGLKRDEQSVSSNKNLL SSSVVDSWC
Sbjct: 144 KDPEFLKFLETNNKAVEPFRDEDTNSDEETINADGLKRDEQSVSSNKNLLLSSSVVDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQD+PLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDVPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 157
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 287

[Close]

BLAST of Chy9G164360 vs. NCBI nr
Match: KAA0039085.1 (nucleolar complex protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (643), Expect = 5.59e-77
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 144 KDPEFLKFLETY-KAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 157
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 286

[Close]

BLAST of Chy9G164360 vs. NCBI nr
Match: TYK14874.1 (nucleolar complex protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (644), Expect = 7.07e-77
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 175 EDPEFLKFLETY-KAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 234

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 235 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 294

Query: 135 LFRGQLGILTKSYKKEMILELRNT 157
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 295 LFREQLGLLTKSYKKEMILELRNT 317

[Close]

BLAST of Chy9G164360 vs. NCBI nr
Match: XP_016901916.1 (PREDICTED: LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog [Cucumis melo])

HSP 1 Score: 252 bits (643), Expect = 1.15e-76
Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 15  QDPEFLKFLETNNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKN-LLSSSVVDSWC 74
           +DPEFLKFLET  KAVEPF DE TS DEETINADGLKRDEQSVSSNKN LLSSSV+DSWC
Sbjct: 144 KDPEFLKFLETY-KAVEPFRDEDTSSDEETINADGLKRDEQSVSSNKNFLLSSSVIDSWC 203

Query: 75  HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGDN 134
           HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKI NSETFSKILIFMLSE DN
Sbjct: 204 HQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIVNSETFSKILIFMLSEADN 263

Query: 135 LFRGQLGILTKSYKKEMILELRNT 157
           LFR QLG+LTKSYKKEMILELRNT
Sbjct: 264 LFREQLGLLTKSYKKEMILELRNT 286

[Close]

BLAST of Chy9G164360 vs. TAIR 10
Match: AT3G55510.1 (Noc2p family )

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-14
Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 48  DGLKRDEQSVSSNKNLLSSSVVDSWCHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVD 107
           D L  +  S      +LS S + + C  V  +Q +P    L+N YRAAC YG E  G   
Sbjct: 93  DELVNETDSDIMKCKVLSRSFLATCCDMVDKEQYVPALVRLLNWYRAACQYGHEPSGIAR 152

Query: 108 AGRCYKIGNSETFSKILIFMLSEGDNLFRGQLGILTKSYKKEMILELRN 157
               Y I +SETF+K++IF+L + D+ FR  LG L+ S  KE IL+L+N
Sbjct: 153 PNIYYDIEDSETFAKVIIFVLQKADHTFRSILG-LSDSSTKEKILKLKN 200

[Close]

BLAST of Chy9G164360 vs. TAIR 10
Match: AT2G18220.1 (Noc2p family )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 16  DPEFLKFLET---NNKAVEPFGDEGTSFDEETINADGLKRDEQSVSSNKNLLSSSVVDSW 75
           D E LKF  T   ++  VEP  D      E+  + +  K +       +  +++S+VD+W
Sbjct: 81  DAELLKFDATEIEDDADVEP--DTDLEDTEKEGDDEATKMEIAKKVHVQKTITASMVDAW 140

Query: 76  CHQVKNKQDLPLFTSLINGYRAACHYGSEAIGNVDAGRCYKIGNSETFSKILIFMLSEGD 135
              ++++  L    S++  YR ACHYG +     D    + + +SE F+KI+I++LSE D
Sbjct: 141 SKSIEDEAKLGGVRSILRAYRTACHYGDDT--GDDQSTKFSVMSSEVFNKIMIYVLSEMD 200

Query: 136 NLFRGQLGILTKSY-KKEMILELRNT 158
            + R  L     +   KE ILEL NT
Sbjct: 201 GILRKLLRFPEDTRGTKETILELTNT 222

The following BLAST results are available for this feature:

BLAST of Chy9G164360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPV5	2.4e-09	31.51	Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At2g18220...	[more]
Q8LNU5	3.5e-08	29.45	Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Chy9G164360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E491	2.4e-68	91.84	nucleolar complex protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103501701 PE=3...	[more]
A0A0A0LC17	5.3e-68	93.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G215640 PE=3 SV=1	[more]
A0A5D3CVA0	1.2e-64	91.67	Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TCF4	1.6e-64	91.67	Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E108	1.6e-64	91.67	LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog OS=Cucumis melo OX=3656...	[more]

BLAST of Chy9G164360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903037.1	4.79e-82	91.84	PREDICTED: nucleolar complex protein 2 homolog [Cucumis melo]	[more]
XP_011651274.1	4.53e-81	93.06	nucleolar complex protein 2 homolog [Cucumis sativus] >XP_011651275.1 nucleolar ...	[more]
KAA0039085.1	5.59e-77	91.67	nucleolar complex protein 2-like protein [Cucumis melo var. makuwa]	[more]
TYK14874.1	7.07e-77	91.67	nucleolar complex protein 2-like protein [Cucumis melo var. makuwa]	[more]
XP_016901916.1	1.15e-76	91.67	PREDICTED: LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog [Cucumis mel...	[more]

BLAST of Chy9G164360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55510.1	4.3e-14	40.37	Noc2p family	[more]
AT2G18220.1	1.7e-10	31.51	Noc2p family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005343	Nucleolar complex protein 2	PANTHER	PTHR12687	NUCLEOLAR COMPLEX 2 AND RAD4-RELATED	coord: 15..157
None	No IPR available	PANTHER	PTHR12687:SF8	NOC2P FAMILY	coord: 15..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G164360.1	Chy9G164360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0030690	Noc1p-Noc2p complex
cellular_component	GO:0030691	Noc2p-Noc3p complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm