Chy9G164110 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G164110
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chrH09: 9241369 .. 9242923 (-)
RNA-Seq Expression	Chy9G164110
Synteny	Chy9G164110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAACACCTTGATGAGCTGTAGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCCGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGGTATTCAATTTTGAAATGACTTTTGTTTGTTTAATCTGGTGGGGTTTGTTAACGTAGGATGATGATTGCTTTTTCTAGGCGTTTGAGGAAATGTCCAAGAGAGTCCTGATACTCTTTGGATGCTTTGATTTGTCCTTGACTCCATGAAATCGTTATATGTGTGAATCTAAACTTAAATTAAATTTGTTTTGATAATTATTTGGCGAGATTTAAGTTTATAAACATTACTCAGCCTATATTTCCTTTTACCAATATTTTTAAAAATCAAGCTAAGTTTCCATAACTAAAAGAAGTAGTTTTTTCTGTTCTTTTGAACATAACTAAGAACTCAAGCCTTTTGTCAAAAGGGAAAACCTTGAGAGAAAACAAACATAAATTCCATAAACTAAGAATGAAAAAGAAAATCATATCAAACTGGTTTTTGTCTGCTTAGTGATGATTAATTTACCCTTATTTATTAGCTGTAGTTTTTGGCTAAGTGGTGAATTAGAATCGATTAAACGTTTGAGATCTGTGGTCATGTTCAACAGTGATTTTGGATTCGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTGTAAGCTTACCAAATTCAGTTGCTTGATTCCGAGATTGAAGGGGGCTTTTCCTTTTTCATTTTCCAATGCTGTTCCTTTTGTTTTTCAGCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTAACTGCTCTCATTTTTTTCATATCAATTAGAGAAGAATTGAACTTTTGAGTGCTTTTGGAACTGTTAAAACTACTTTAGGTATCATTCATATTGGAAATGTTAACATGTAGAAGTTGATTACTTTTGACTCAAATGGTTATCTTATAATGAAAAACATTTGATACTAATTATCAAACACTTACGGGTTTGTAGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAACAATTTCGCCTTGA

mRNA sequence

ATGGCTTCCAACACCTTGATGAGCTGTAGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCCGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAACAATTTCGCCTTGA

Coding sequence (CDS)

ATGGCTTCCAACACCTTGATGAGCTGTAGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCCGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAACAATTTCGCCTTGA

Protein sequence

MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP*

Homology

[Close]

BLAST of Chy9G164110 vs. ExPASy Swiss-Prot
Match: P12360 (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB6A PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 9.9e-119
Identity = 208/246 (84.55%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC I     PS LSS+KSKFA  +P+   A N  SRFSMSA+WMPGQPRP YL
Sbjct: 1   MASNTLMSCGIPAVC-PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AA+PGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDP K +E KVKEIKNGRLALLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+II
Sbjct: 181 KDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVII 240

Query: 241 PRTISP 247
           P+ I P
Sbjct: 241 PKGIFP 245

[Close]

BLAST of Chy9G164110 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.1e-116
Identity = 205/242 (84.71%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSC IA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 240
           SKDP+KL+E KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+
Sbjct: 181 SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 239

Query: 241 IP 242
           IP
Sbjct: 241 IP 239

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BLAST of Chy9G164110 vs. ExPASy Swiss-Prot
Match: Q9SDM1 (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.6e-105
Identity = 184/243 (75.72%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 2   ASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLD 61
           +S+ L SCS      PS+L+ S      G+P    A   S R +MSAEW PGQPRP +LD
Sbjct: 3   SSSGLRSCS--AVGVPSLLAPSSRSGRSGLPFCAYA-TTSGRVTMSAEWFPGQPRPAHLD 62

Query: 62  GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 121
           GS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML VPG+LVPEALGLGNWVKAQEWA
Sbjct: 63  GSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWA 122

Query: 122 AVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 181
           A+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SK
Sbjct: 123 ALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSK 182

Query: 182 DPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP 241
           DP K +E K+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Sbjct: 183 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 242

Query: 242 RTI 245
           R I
Sbjct: 243 RNI 242

[Close]

BLAST of Chy9G164110 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 95/236 (40.25%), Postives = 127/236 (53.81%), Query Frame = 0


Query: 20  LSSSKSKFAVGVPISGVAVNASSRFSMSA---EWMPGQPRPPYLDGSAPGDFGFDPLRLG 79
           L  S  K   GV    V  + S+ F + A   EW+PG   P YL GS PGD GFDPL L 
Sbjct: 23  LGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLA 82

Query: 80  EVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVP 139
           E PENL  F ++EL++ RWAML V G+L+PE       +   +W A         G+   
Sbjct: 83  EDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAA--------GKEEY 142

Query: 140 WGTLPTILVIEFLAIAFVEHQR--------SMEKDPEKKK---------YPGGAFDPLGY 199
           + +  T+ VIEF+   +VE +R        S+ +DP  K+         YPGG F+PL +
Sbjct: 143 FASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNF 202

Query: 200 SKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 236
           +       E K KEI NGRLA+LAF+GF +Q +   G GP +NL  H++DPWHN I
Sbjct: 203 A----PTLEAKEKEIANGRLAMLAFLGFIIQHNV-TGKGPFDNLLQHISDPWHNTI 245

[Close]

BLAST of Chy9G164110 vs. ExPASy Swiss-Prot
Match: Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 106/282 (37.59%), Postives = 140/282 (49.65%), Query Frame = 0


Query: 3   SNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVN---ASSRFSMSAEWMPGQPRPPY 62
           S    + SI  T   S +SS+ S+F           +   A +  S    W PG   P Y
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEY 64

Query: 63  LDGSAPGDFGFDPLRLGEVPE--------------------------------------- 122
           LDGS  GD+GFDP  LG+  E                                       
Sbjct: 65  LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPY 124

Query: 123 ----NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVP 182
                L+RF+E ELIH RWAMLA  G +  E L    W  A +   V G  ++YLGQP+P
Sbjct: 125 SEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLP 184

Query: 183 WGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIK 238
           + ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DP K  + ++ EIK
Sbjct: 185 F-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIK 244

[Close]

BLAST of Chy9G164110 vs. ExPASy TrEMBL
Match: A0A0A0KNM4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G490820 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 247
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. ExPASy TrEMBL
Match: A0A5A7TXV7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001080 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 5.8e-138
Identity = 242/246 (98.37%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 247
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. ExPASy TrEMBL
Match: A0A1S3BYE0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494548 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 5.8e-138
Identity = 242/246 (98.37%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 247
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. ExPASy TrEMBL
Match: A0A5D3BC57 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001420 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSFEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 247
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. ExPASy TrEMBL
Match: A0A6J1BW39 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006054 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.3e-137
Identity = 240/246 (97.56%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 247
           PR ISP
Sbjct: 241 PRNISP 246

[Close]

BLAST of Chy9G164110 vs. NCBI nr
Match: XP_004143800.1 (chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus])

HSP 1 Score: 498 bits (1282), Expect = 8.65e-178
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 246
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. NCBI nr
Match: XP_008453995.1 (PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA0048040.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 496 bits (1276), Expect = 7.11e-177
Identity = 242/246 (98.37%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 246
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. NCBI nr
Match: TYJ96496.1 (chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 494 bits (1273), Expect = 2.04e-176
Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSFEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 246
           PRTISP
Sbjct: 241 PRTISP 246

[Close]

BLAST of Chy9G164110 vs. NCBI nr
Match: XP_038891246.1 (chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida])

HSP 1 Score: 494 bits (1271), Expect = 4.11e-176
Identity = 240/246 (97.56%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSSPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 246
           PR+ISP
Sbjct: 241 PRSISP 246

[Close]

BLAST of Chy9G164110 vs. NCBI nr
Match: XP_022133484.1 (chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia])

HSP 1 Score: 492 bits (1266), Expect = 2.38e-175
Identity = 240/246 (97.56%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSC IATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 241 PRTISP 246
           PR ISP
Sbjct: 241 PRNISP 246

[Close]

BLAST of Chy9G164110 vs. TAIR 10
Match: AT3G54890.1 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-117
Identity = 205/242 (84.71%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSC IA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 240
           SKDP+KL+E KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+
Sbjct: 181 SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 239

Query: 241 IP 242
           IP
Sbjct: 241 IP 239

[Close]

BLAST of Chy9G164110 vs. TAIR 10
Match: AT3G54890.2 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 334.7 bits (857), Expect = 6.2e-92
Identity = 173/242 (71.49%), Postives = 183/242 (75.62%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSC IA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                          
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAF-------------------------- 180

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 240
                   E KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+
Sbjct: 181 --------ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 205

Query: 241 IP 242
           IP
Sbjct: 241 IP 205

[Close]

BLAST of Chy9G164110 vs. TAIR 10
Match: AT3G54890.4 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-89
Identity = 162/199 (81.41%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSC IA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGR 199
           SKDP+KL+E KVKEIKNG+
Sbjct: 181 SKDPKKLEELKVKEIKNGK 196

[Close]

BLAST of Chy9G164110 vs. TAIR 10
Match: AT3G54890.3 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 234.6 bits (597), Expect = 8.7e-62
Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MASNTLMSCSIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSC IA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLA 151
           WAA+PGGQATYLG PVPWGTLPTIL IEFLA
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLA 148

[Close]

BLAST of Chy9G164110 vs. TAIR 10
Match: AT3G08940.2 (light harvesting complex photosystem II )

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-38
Identity = 106/282 (37.59%), Postives = 140/282 (49.65%), Query Frame = 0


Query: 3   SNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVN---ASSRFSMSAEWMPGQPRPPY 62
           S    + SI  T   S +SS+ S+F           +   A +  S    W PG   P Y
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEY 64

Query: 63  LDGSAPGDFGFDPLRLGEVPE--------------------------------------- 122
           LDGS  GD+GFDP  LG+  E                                       
Sbjct: 65  LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPY 124

Query: 123 ----NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVP 182
                L+RF+E ELIH RWAMLA  G +  E L    W  A +   V G  ++YLGQP+P
Sbjct: 125 SEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLP 184

Query: 183 WGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIK 238
           + ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DP K  + ++ EIK
Sbjct: 185 F-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIK 244

The following BLAST results are available for this feature:

BLAST of Chy9G164110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12360	9.9e-119	84.55	Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
Q01667	2.1e-116	84.71	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9SDM1	1.6e-105	75.72	Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 ...	[more]
Q9SQL2	1.9e-37	40.25	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
Q9XF88	1.9e-37	37.59	Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of Chy9G164110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNM4	1.2e-138	99.19	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7TXV7	5.8e-138	98.37	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BYE0	5.8e-138	98.37	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BC57	1.3e-137	98.37	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BW39	8.3e-137	97.56	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Chy9G164110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143800.1	8.65e-178	99.19	chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]	[more]
XP_008453995.1	7.11e-177	98.37	PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA...	[more]
TYJ96496.1	2.04e-176	98.37	chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]	[more]
XP_038891246.1	4.11e-176	97.56	chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]	[more]
XP_022133484.1	2.38e-175	97.56	chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]	[more]

BLAST of Chy9G164110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54890.1	1.5e-117	84.71	photosystem I light harvesting complex gene 1	[more]
AT3G54890.2	6.2e-92	71.49	photosystem I light harvesting complex gene 1	[more]
AT3G54890.4	2.2e-89	81.41	photosystem I light harvesting complex gene 1	[more]
AT3G54890.3	8.7e-62	78.15	photosystem I light harvesting complex gene 1	[more]
AT3G08940.2	1.4e-38	37.59	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 57..211 e-value: 3.9E-47 score: 160.8
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 51..237 e-value: 1.9E-80 score: 271.0
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 28..237
None	No IPR available	PANTHER	PTHR21649:SF89	CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC	coord: 28..237
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 40..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G164110.1	Chy9G164110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding