Chy9G164040 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G164040
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RRM domain-containing protein
Location	chrH09: 9066473 .. 9067160 (-)
RNA-Seq Expression	Chy9G164040
Synteny	Chy9G164040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGATTCTACGCCCCTTCACTGCCGTTTCACAACGATTTGGCCGTTGCTGCAACACAGTTGCCATTACAACTCTTCAAATTCCACAAAATTCCGGCCCCCCCATCTCAATTTGTCTCTTATCCAGGCCTCCGGACCAATGGGGTTTCCTGTTTTTGCTGTGAAGAGGTTGGGGAAAGGCGGCATTGCCCTCACTGAGCCAAGTGATTCCGACATTGACTTTGATGAATTTTTCGATGAGGATGAGGATAATTTTCAGGATGAGGATGATATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGTGTATGATACTTCGATTGAAGACAACTTGCTACAAGAAATGGAGCAGATTAGGGAAGCTCAAGCTGCTAATATCAATAACCTCAAGAATCAGTCTTCTTCTAATCCCAACTCTAGTAGAAATGTCGTAGAGATAGCAGGTCAGCCTCAATCTCTCTCAATTTTTAACTCTTTATTCTCTGATTCTGCAAACTGCTGCTGAATTGAAATGTTTGTTATTGTTTAGCTCATAGTTTTTGTTTTTGTTTTTTCTGTAAATTAAATTTGTGGGTGTAGACATTTGCCCAGATAGATTAAGAGTGGAAAATATCATCGGTGGAGAACGGTCCGTTGCTCTTATCAATTGA

mRNA sequence

ATGTTCGATTCTACGCCCCTTCACTGCCGTTTCACAACGATTTGGCCGTTGCTGCAACACAGTTGCCATTACAACTCTTCAAATTCCACAAAATTCCGGCCCCCCCATCTCAATTTGTCTCTTATCCAGGCCTCCGGACCAATGGGGTTTCCTGTTTTTGCTGTGAAGAGGTTGGGGAAAGGCGGCATTGCCCTCACTGAGCCAAGTGATTCCGACATTGACTTTGATGAATTTTTCGATGAGGATGAGGATAATTTTCAGGATGAGGATGATATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGTGTATGATACTTCGATTGAAGACAACTTGCTACAAGAAATGGAGCAGATTAGGGAAGCTCAAGCTGCTAATATCAATAACCTCAAGAATCAGTCTTCTTCTAATCCCAACTCTAGTAGAAATGTCGTAGAGATAGCAGACATTTGCCCAGATAGATTAAGAGTGGAAAATATCATCGGTGGAGAACGGTCCGTTGCTCTTATCAATTGA

Coding sequence (CDS)

ATGTTCGATTCTACGCCCCTTCACTGCCGTTTCACAACGATTTGGCCGTTGCTGCAACACAGTTGCCATTACAACTCTTCAAATTCCACAAAATTCCGGCCCCCCCATCTCAATTTGTCTCTTATCCAGGCCTCCGGACCAATGGGGTTTCCTGTTTTTGCTGTGAAGAGGTTGGGGAAAGGCGGCATTGCCCTCACTGAGCCAAGTGATTCCGACATTGACTTTGATGAATTTTTCGATGAGGATGAGGATAATTTTCAGGATGAGGATGATATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGTGTATGATACTTCGATTGAAGACAACTTGCTACAAGAAATGGAGCAGATTAGGGAAGCTCAAGCTGCTAATATCAATAACCTCAAGAATCAGTCTTCTTCTAATCCCAACTCTAGTAGAAATGTCGTAGAGATAGCAGACATTTGCCCAGATAGATTAAGAGTGGAAAATATCATCGGTGGAGAACGGTCCGTTGCTCTTATCAATTGA

Protein sequence

MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGKGGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAARPRGFGEGKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIADICPDRLRVENIIGGERSVALIN*

Homology

[Close]

BLAST of Chy9G164040 vs. ExPASy TrEMBL
Match: A0A0A0KQN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           MFDSTPLHC FTTI PLLQHSCHYNSS STKFRPPHLNLSLIQASGPMGFPVFAVKRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAARPRGFGEGKVYDTSI 120
           GGIALTEPSDSDI FDEFFDE EDNFQDEDDILLPLKNT+EWHAARPRGFGEGKVYDTSI
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEWHAARPRGFGEGKVYDTSI 160

Query: 121 EDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 161
           EDNLLQEMEQIREAQAANIN LK+QSSSNPNSSRNVVEIA
Sbjct: 161 EDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIA 200

[Close]

BLAST of Chy9G164040 vs. ExPASy TrEMBL
Match: A0A0A0KS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.7e-79
Identity = 151/160 (94.38%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           MFDSTPLHC FTTI PLLQHSCHYNSS STKFRPPHLNLSLIQASGPMGFPVFAVKRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAARPRGFGEGKVYDTSI 120
           GGIALTEPSDSDI FDEFFDE EDNFQDEDDILLPLKNT+EWHAARPRGFGEGKVYDTSI
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEWHAARPRGFGEGKVYDTSI 160

Query: 121 EDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 161
           EDNLLQEMEQIREAQAANIN LK+QS SNPNSSRNVVEIA
Sbjct: 161 EDNLLQEMEQIREAQAANINKLKDQSPSNPNSSRNVVEIA 200

[Close]

BLAST of Chy9G164040 vs. ExPASy TrEMBL
Match: A0A5D3C5E5 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00620 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.5e-78
Identity = 151/168 (89.88%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           M DSTPLHCRFTTI PLLQHSCHYNSSNSTKFRPPHLNLSLIQ SGPMGFPVFA+KRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFF--------DEDEDNFQDEDDILLPLKNTREWHAARPRGFGE 120
           GGIALT+PSDSDIDFDEFF        DEDEDNFQDED+ILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 161
           GKVYDTSIED LLQEMEQIREAQAANIN LKNQSSS PNSSRNVVEIA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQSSSKPNSSRNVVEIA 168

[Close]

BLAST of Chy9G164040 vs. ExPASy TrEMBL
Match: A0A1S3CPG6 (uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.2e-77
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           M DSTPLHCRFTTI PLLQHSCHYNSSNSTKFRPPHLNLSLIQ SGPMGFPVFA+KRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFF--------DEDEDNFQDEDDILLPLKNTREWHAARPRGFGE 120
           GGIALT+PSDSDIDFDEFF        DEDEDNFQDED+ILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 161
           GKVYDTSIED LLQEMEQIREAQAANIN LKNQ SS PNSSRNVVEIA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRNVVEIA 168

[Close]

BLAST of Chy9G164040 vs. ExPASy TrEMBL
Match: A0A6J1KJD4 (uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.3e-43
Identity = 103/172 (59.88%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNS--------------SNSTKFRPPHLNLSLIQASG 60
           M DS PLHCRF T WP   HS   NS               NSTKFR  H +LSL+    
Sbjct: 23  MLDSPPLHCRFITTWPSAPHSRRNNSLLLPTPYYNLQPCNPNSTKFRSLHFSLSLVHGPR 82

Query: 61  PMGFPVFAVKRLGKGGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAAR 120
           PM FPVF++K+ GKGG++LT  SDSDI+FD   DED D     D++LLPL N REW AAR
Sbjct: 83  PMYFPVFSLKKRGKGGVSLTNQSDSDIEFDG--DEDLDG----DEMLLPLANMREWLAAR 142

Query: 121 PRGFGEGKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVE 159
           PRGFGEGK YDTSIE+ LLQE+EQ R+AQAANIN LK+Q  SNPNSSRNVV+
Sbjct: 143 PRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSSRNVVD 188

[Close]

BLAST of Chy9G164040 vs. NCBI nr
Match: KAE8648511.1 (hypothetical protein Csa_008404 [Cucumis sativus])

HSP 1 Score: 301 bits (772), Expect = 1.97e-102
Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           MFDSTPLHC FTTI PLLQHSCHYNSS STKFRPPHLNLSLIQASGPMGFPVFAVKRLGK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAARPRGFGEGKVYDTSI 120
           GGIALTEPSDSDI FDEFFDE EDNFQDEDDILLPLKNT+EWHAARPRGFGEGKVYDTSI
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEWHAARPRGFGEGKVYDTSI 120

Query: 121 EDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 160
           EDNLLQEMEQIREAQAANIN LK+QSSSNPNSSRNVVEIA
Sbjct: 121 EDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIA 160

[Close]

BLAST of Chy9G164040 vs. NCBI nr
Match: KAA0040563.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 296 bits (758), Expect = 4.49e-99
Identity = 151/168 (89.88%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           M DSTPLHCRFTTI PLLQHSCHYNSSNSTKFRPPHLNLSLIQ SGPMGFPVFA+KRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDD--------ILLPLKNTREWHAARPRGFGE 120
           GGIALT+PSDSDIDFDEFFDEDEDNFQDED+        ILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 160
           GKVYDTSIED LLQEMEQIREAQAANIN LKNQSSS PNSSRNVVEIA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQSSSKPNSSRNVVEIA 168

[Close]

BLAST of Chy9G164040 vs. NCBI nr
Match: XP_031741253.1 (uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741254.1 uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741255.1 uncharacterized protein LOC101210443 [Cucumis sativus])

HSP 1 Score: 301 bits (772), Expect = 1.00e-98
Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           MFDSTPLHC FTTI PLLQHSCHYNSS STKFRPPHLNLSLIQASGPMGFPVFAVKRLGK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDDILLPLKNTREWHAARPRGFGEGKVYDTSI 120
           GGIALTEPSDSDI FDEFFDE EDNFQDEDDILLPLKNT+EWHAARPRGFGEGKVYDTSI
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEWHAARPRGFGEGKVYDTSI 120

Query: 121 EDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 160
           EDNLLQEMEQIREAQAANIN LK+QSSSNPNSSRNVVEIA
Sbjct: 121 EDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIA 160

[Close]

BLAST of Chy9G164040 vs. NCBI nr
Match: XP_008465688.1 (PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465690.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465692.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_016903478.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo])

HSP 1 Score: 294 bits (752), Expect = 1.39e-95
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           M DSTPLHCRFTTI PLLQHSCHYNSSNSTKFRPPHLNLSLIQ SGPMGFPVFA+KRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDD--------ILLPLKNTREWHAARPRGFGE 120
           GGIALT+PSDSDIDFDEFFDEDEDNFQDED+        ILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIA 160
           GKVYDTSIED LLQEMEQIREAQAANIN LKNQ SS PNSSRNVVEIA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRNVVEIA 168

[Close]

BLAST of Chy9G164040 vs. NCBI nr
Match: XP_038890170.1 (uncharacterized protein LOC120079826 [Benincasa hispida])

HSP 1 Score: 257 bits (657), Expect = 2.40e-81
Identity = 128/171 (74.85%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 1   MFDSTPLHCRFTTIWPLLQHSCHYNSSNSTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60
           MFDS  L CRF TIWP +QH CHYNS NSTKFRPPH + SL+  SGPMGFPVFA+KR GK
Sbjct: 1   MFDSPSLQCRFVTIWPSVQHCCHYNSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGK 60

Query: 61  GGIALTEPSDSDIDFDEFFDEDEDNFQDEDD--ILLPLKNTREWHAARPRGFGEGKVYDT 120
           GG++LTE S+SDI+FD+FFDEDED+FQDED+  ILLPLKNTREWH ARPRGFGEGK YDT
Sbjct: 61  GGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTREWHGARPRGFGEGKAYDT 120

Query: 121 SIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRNVVEIADICPDRLRV 169
           SIED LLQEMEQ REAQAANIN L NQS+S P SSRN VE A+I    +RV
Sbjct: 121 SIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEKAEIVSTGVRV 171

[Close]

BLAST of Chy9G164040 vs. TAIR 10
Match: AT1G70200.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 49  GFPVFAVKRLGKGGIALTEPSD----SDIDFDEFFDEDEDNFQDEDD-ILLPLKNTREWH 108
           GF  FAV +   G   + E  D     D D+ EF  EDE   ++ED+   LP+   ++W 
Sbjct: 62  GFCSFAVNKRRSGDSVIVESDDDDEEDDEDWGEFDGEDEGEEEEEDEGEFLPMDKMKKWL 121

Query: 109 AARPRGFGEGKVYDTSIEDNLLQEMEQIREAQAANINNLKNQSSSNPNSSRN 156
             +PRGFG GK Y+T IED LL E+EQ  +AQAAN+N LKN    +    R+
Sbjct: 122 EKKPRGFGLGKKYETLIEDKLLDEIEQSWKAQAANLNKLKNDPLKSQQLKRD 173

The following BLAST results are available for this feature:

BLAST of Chy9G164040 vs.


Match Name	E-value	Identity	Description

BLAST of Chy9G164040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQN3	2.0e-79	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1	[more]
A0A0A0KS07	7.7e-79	94.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1	[more]
A0A5D3C5E5	8.5e-78	89.88	Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CPG6	4.2e-77	89.29	uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=...	[more]
A0A6J1KJD4	2.3e-43	59.88	uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728...	[more]

BLAST of Chy9G164040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648511.1	1.97e-102	95.00	hypothetical protein Csa_008404 [Cucumis sativus]	[more]
KAA0040563.1	4.49e-99	89.88	glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic ...	[more]
XP_031741253.1	1.00e-98	95.00	uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741254.1 uncharact...	[more]
XP_008465688.1	1.39e-95	89.29	PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 P...	[more]
XP_038890170.1	2.40e-81	74.85	uncharacterized protein LOC120079826 [Benincasa hispida]	[more]

BLAST of Chy9G164040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70200.1	3.9e-14	41.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..145
None	No IPR available	PANTHER	PTHR37200	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 13..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G164040.1	Chy9G164040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding