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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAGTTACTCATGGCCAGAGGAAGGAGTGAGAAAAAAAGCTGGAAAGGCAAAGAGAAGAGTTCCAGGTCGAAATCAAAGGGAAAAGGTAGAAAGTGTTTCTTATGTCATAAAGAAGGACACTTTAAGAAAAATTGTCCTTTGAATAAGAGCAAGGAAGCATCGAGTAGCCAGTATCCAGGTGAGACTAGTTCAGCAAATGTTATTGATGGGTATGATTCAGCTCAGGTCTTGATGGTGTCTCATAGGGATATTCAGGATGCTTGGATCATGGATTCAGGGTGCACATATCACATGACTCCTAATCGAGATTTTCTAATTAATTTTCAGAAAAATGATGGGGGAAAAGTCTTACTGGGTGATATGGTACCTGTGATGTAAAGGGAATTGGTTCAGTCCAAATTGCAACACATGACGAGATGATCAGAGTTCTCACTAATGTTAGATATGTTCCGGAACTCAAACGTAATCTAATATCTCTTGGTGATTTAGATAGATCAGGTTATACTTGTAAATCTGAGAATGGAGTTATGAAAATTACCAAGGGTTCTTTGGTTAAACTGAGGGGAACCTTGAGGAATGGTTTGTATGTGTTGGAAGGTACTGCAGTTTCAGGCAGTGCTG mRNA sequence ATGGAGAGTTACTCATGGCCAGAGGAAGGAGTGAGAAAAAAAGCTGGAAAGGCAAAGAGAAGAGTTCCAGGTCGAAATCAAAGGGAAAAGGTAGAAAGTGTTTCTTATGTCATAAAGAAGGACACTTTAAGAAAAATTGTCCTTTGAATAAGAGCAAGGAAGCATCGAGTAGCCAGTATCCAGGTGAGACTAGTTCAGCAAATGTTATTGATGGGTATGATTCAGCTCAGGTCTTGATGGTGTCTCATAGGGATATTCAGGATGCTTGGATCATGGATTCAGGTCTTACTGGGTGATATGGTACCTGTGATGTAAAGGGAATTGGTTCAGTCCAAATTGCAACACATGACGAGATGATCAGAGTTCTCACTAATGTTAGATATGTTCCGGAACTCAAACGTAATCTAATATCTCTTGGTGATTTAGATAGATCAGGTTATACTTGTAAATCTGAGAATGGAGTTATGAAAATTACCAAGGGTTCTTTGGTTAAACTGAGGGGAACCTTGAGGAATGGTTTGTATGTGTTGGAAGGTACTGCAGTTTCAGGCAGTGCTG Coding sequence (CDS) ATGGAGAGTTACTCATGGCCAGAGGAAGGAGTGAGAAAAAAAGCTGGAAAGGCAAAGAGAAGAGTTCCAGGTCGAAATCAAAGGGAAAAGGTAGAAAGTGTTTCTTATGTCATAAAGAAGGACACTTTAAGAAAAATTGTCCTTTGAATAAGAGCAAGGAAGCATCGAGTAGCCAGTATCCAGGTGAGACTAGTTCAGCAAATGTTATTGATGGGTATGATTCAGCTCAGGTCTTGATGGTGTCTCATAGGGATATTCAGGATGCTTGGATCATGGATTCAGGTCTTACTGGGTGATATGGTACCTGTGATGTAAAGGGAATTGGTTCAGTCCAAATTGCAACACATGACGAGATGATCAGAGTTCTCACTAATGTTAGATATGTTCCGGAACTCAAACGTAATCTAATATCTCTTGGTGATTTAGATAGATCAGGTTATACTTGTAAATCTGAGAATGGAGTTATGAAAATTACCAAGGGTTCTTTGGTTAAACTGAGGGGAACCTTGAGGAATGGTTTGTATGTGTTGGAAGGTACTGCAGTTTCAGGCAGTGCTG Protein sequence MESYSWPEEGVRKKAGKAKRRVPGRNQREKVESVSYVIKKDTLRKIVL*IRARKHRVASIQVRLVQQMLLMGMIQLRS*WCLIGIFRMLGSWIQVLLGDMVPVM*RELVQSKLQHMTR*SEFSLMLDMFRNSNVI*YLLVI*IDQVILVNLRMEL*KLPRVLWLN*GEP*GMVCMCWKVLQFQAVL
Homology
BLAST of Chy9G163750 vs. NCBI nr
Match: KGN51025.2 (hypothetical protein Csa_023133, partial [Cucumis sativus]) HSP 1 Score: 84.3 bits (207), Expect = 1.31e-16 Identity = 52/94 (55.32%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 1 MESYSWPEEGVRKKAGKAKRRVPGRNQREKVESVSYVIKKDTLRKIVL*IRARKHRVASI 60
ME+YSWPEEGVRK GKAKRRVP +NQ EKVESVSYVIK DTLRK +++K +
Sbjct: 1 MENYSWPEEGVRKGVGKAKRRVPNQNQGEKVESVSYVIKNDTLRKNCPLNKSKKASSSQY 60
Query: 61 QVRLVQQMLLMGMIQLRS*WCLIGIFRMLGSWIQ 94
+ G LIGI RMLGSWIQ
Sbjct: 61 ATETSAANVTDGCDSTEVLMGLIGILRMLGSWIQ 94
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KGN51025.2 | 1.31e-16 | 55.32 | hypothetical protein Csa_023133, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..15 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..26 |
Relationships
The following mRNA feature(s) are a part of this gene:
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