Chy9G163670 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAATCATTCTCTTTTGATTTTCTCTCCTCCCAGAAGAAGCCGCTCAGACTATTCGGAATTGAACTCATCAACGTCCCACCAGCATTAGAAGAAAAAGAAGAATCAAGAAGATCAAACGATTCTTCTTCTTTTTCTTCTTCTTCCATCACACGCCGCCTGTGTGGTAATCTCGATGACAGACCAATGAGAAACGTCAGGACTAGAACATTATTCCACTGCCAGTATTGTTTGAAGGAGTTCACAAACTCACAAGCATTGGGCGGTCACCAAAACGCCCACAAGAAGGAGAGGCTCAAGCAGAAGAGACTCCAGATTGAAGCACAAAACTCCAGCCTTCGTCGTTACCTTCAAAGTTACTTTAATTCCCATTTTTCCCATGAATTTGATGGCTCCCACATCAGCTTCACCTTCCGTTCCAACAATGATTTTTCTGTTGCCTCTTCTGATATTCCTGCCTCTGCTCCTGAATTTCGTCTCTTCCCATTCTTCTGA ATGGACAAATCATTCTCTTTTGATTTTCTCTCCTCCCAGAAGAAGCCGCTCAGACTATTCGGAATTGAACTCATCAACGTCCCACCAGCATTAGAAGAAAAAGAAGAATCAAGAAGATCAAACGATTCTTCTTCTTTTTCTTCTTCTTCCATCACACGCCGCCTGTGTGGTAATCTCGATGACAGACCAATGAGAAACGTCAGGACTAGAACATTATTCCACTGCCAGTATTGTTTGAAGGAGTTCACAAACTCACAAGCATTGGGCGGTCACCAAAACGCCCACAAGAAGGAGAGGCTCAAGCAGAAGAGACTCCAGATTGAAGCACAAAACTCCAGCCTTCGTCGTTACCTTCAAAGTTACTTTAATTCCCATTTTTCCCATGAATTTGATGGCTCCCACATCAGCTTCACCTTCCGTTCCAACAATGATTTTTCTGTTGCCTCTTCTGATATTCCTGCCTCTGCTCCTGAATTTCGTCTCTTCCCATTCTTCTGA ATGGACAAATCATTCTCTTTTGATTTTCTCTCCTCCCAGAAGAAGCCGCTCAGACTATTCGGAATTGAACTCATCAACGTCCCACCAGCATTAGAAGAAAAAGAAGAATCAAGAAGATCAAACGATTCTTCTTCTTTTTCTTCTTCTTCCATCACACGCCGCCTGTGTGGTAATCTCGATGACAGACCAATGAGAAACGTCAGGACTAGAACATTATTCCACTGCCAGTATTGTTTGAAGGAGTTCACAAACTCACAAGCATTGGGCGGTCACCAAAACGCCCACAAGAAGGAGAGGCTCAAGCAGAAGAGACTCCAGATTGAAGCACAAAACTCCAGCCTTCGTCGTTACCTTCAAAGTTACTTTAATTCCCATTTTTCCCATGAATTTGATGGCTCCCACATCAGCTTCACCTTCCGTTCCAACAATGATTTTTCTGTTGCCTCTTCTGATATTCCTGCCTCTGCTCCTGAATTTCGTCTCTTCCCATTCTTCTGA MDKSFSFDFLSSQKKPLRLFGIELINVPPALEEKEESRRSNDSSSFSSSSITRRLCGNLDDRPMRNVRTRTLFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLRRYLQSYFNSHFSHEFDGSHISFTFRSNNDFSVASSDIPASAPEFRLFPFF* Homology
BLAST of Chy9G163670 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13 Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08 Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08 Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 9.0e-07 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.9e-05 Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy TrEMBL
Match: A0A5A7TC61 (Zinc finger protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00110 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74 Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy TrEMBL
Match: A0A0A0KNG0 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G477610 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy TrEMBL
Match: A0A6J1DUD1 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111024100 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19 Identity = 68/153 (44.44%), Postives = 93/153 (60.78%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy TrEMBL
Match: A0A6P5Y2M4 (zinc finger protein 5-like OS=Durio zibethinus OX=66656 GN=LOC111288184 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 7.6e-17 Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of Chy9G163670 vs. ExPASy TrEMBL
Match: A0A7N2LB95 (C2H2-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.9e-16 Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 0
BLAST of Chy9G163670 vs. NCBI nr
Match: XP_004143824.1 (zinc finger protein 5 [Cucumis sativus] >KGN51556.2 hypothetical protein Csa_008977 [Cucumis sativus]) HSP 1 Score: 307 bits (786), Expect = 7.24e-105 Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of Chy9G163670 vs. NCBI nr
Match: KAA0038869.1 (zinc finger protein 5 [Cucumis melo var. makuwa] >TYJ96007.1 zinc finger protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 283 bits (725), Expect = 1.66e-95 Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Chy9G163670 vs. NCBI nr
Match: XP_038889251.1 (zinc finger protein 5-like [Benincasa hispida]) HSP 1 Score: 172 bits (437), Expect = 6.34e-52 Identity = 105/169 (62.13%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Chy9G163670 vs. NCBI nr
Match: XP_023520460.1 (zinc finger protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137 bits (344), Expect = 5.18e-38 Identity = 77/123 (62.60%), Postives = 88/123 (71.54%), Query Frame = 0
BLAST of Chy9G163670 vs. NCBI nr
Match: KAG7029982.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129 bits (324), Expect = 5.38e-35 Identity = 75/125 (60.00%), Postives = 88/125 (70.40%), Query Frame = 0
BLAST of Chy9G163670 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 ) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14 Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Chy9G163670 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09 Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0
BLAST of Chy9G163670 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09 Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Chy9G163670 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 6.4e-08 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Chy9G163670 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 9.2e-07 Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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