Chy9G163660 (gene) Cucumber (hystrix) v1

Overview
NameChy9G163660
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH09: 8384922 .. 8385574 (-)
RNA-Seq ExpressionChy9G163660
SyntenyChy9G163660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGTATGTTGAAGTATCCTGATGGAAAAGAGATTGTCAGACAATTAATGTGCTAGCTTGGGATTATACTAAACAAAAAGGGCGTGAGATATTATTAGGTTACAAAAGAACATTTCAAGTGTGATGAGTTTGAAGGAGTTAATGCATTAACTTTGAGCCAGGGAAAACCAAAAATTTTGAATTTGAATGAAGTGAGTGAAGAGAAAACAAAAACTTCACTCGGAGTGCCACCGAAAATTAAATAGAATTGAAGGCTTTACCAGTGTATCTCAAGTATCCATATATTTGGTAATTGACAACATTTTACCTGTAATCATTTTATCCAAGTTAAACTCATTAGATGAAAAGCCTTTGTTAGATGTGTTGAGAGCGCATAACAAGACTTTTAGATTGACATTGGCAAATATAAAAGGGATCAACCATTCATATTGCATGCATAAAATAAGATTGGAGGAAAGATATGTTAAGAGGTAGTGCAATATCAATGCAGGCTCAATCTAGCAATGAAAGAAGTAGTGAAAAAAGAAACTATTAAATGGTTGGATGTAGGAGTGATCTACCATATTGCAAACAATGATTGGGAAGTTGTGCTCAATGTGTCCTAAAGAGGGAGGTGTTATAGTGGTTTCAAACAGTAACAAAGAGTTAA

mRNA sequence

ATGCTTGGTATGTTGAAGTATCCTGATGGAAAAGAGATTGTCAGACAATTAATGTGCTAGCTTGGGATTATACTAAACAAAAAGGGCGTGAGATATTATTAGGTTACAAAAGAACATTTCAAGTGTGATGAGTTTGAAGGAGTTAATGCATTAACTTTGAGCCAGGGAAAACCAAAAATTTTGAATTTGAATGAAAGTTAA

Coding sequence (CDS)

ATGCTTGGTATGTTGAAGTATCCTGATGGAAAAGAGATTGTCAGACAATTAATGTGCTAGCTTGGGATTATACTAAACAAAAAGGGCGTGAGATATTATTAGGTTACAAAAGAACATTTCAAGTGTGATGAGTTTGAAGGAGTTAATGCATTAACTTTGAGCCAGGGAAAACCAAAAATTTTGAATTTGAATGAAAGTTAA

Protein sequence

MLGMLKYPDGKEIVRQLMC*LGIILNKKGVRYY*VTKEHFKCDEFEGVNALTLSQGKPKILNLNES*
Homology
[Close]
BLAST of Chy9G163660 vs. ExPASy TrEMBL
Match: A0A0A0L672 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G067765 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 1  MLGMLKYPDGKEIVRQLMC*LGIILNKKGV-RYY*VTKEHFKCDEFEGVNALTLSQGKPK 60
          MLGMLKYPDGKE  + +         +KG+ +    +KEHF+ +EFEGVNALT SQGK K
Sbjct: 1  MLGMLKYPDGKETCQTINVLAWDYTKQKGLEKLLAYSKEHFEWNEFEGVNALTESQGKLK 60

Query: 61 ILNLNES 67
           LNLNES
Sbjct: 61 SLNLNES 67

[Close]
BLAST of Chy9G163660 vs. NCBI nr
Match: KAE8648490.1 (hypothetical protein Csa_009231 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 5.09e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 1  MLGMLKYPDGKEIVRQLMC*LGIILNKKGV-RYY*VTKEHFKCDEFEGVNALTLSQGKPK 60
          MLGMLKYPDGKE  + +         +KG+ +    +KEHF+ +EFEGVNALT SQGK K
Sbjct: 1  MLGMLKYPDGKETCQTINVLAWDYTKQKGLEKLLAYSKEHFEWNEFEGVNALTESQGKLK 60

Query: 61 ILNLNES 66
           LNLNES
Sbjct: 61 SLNLNES 67

The following BLAST results are available for this feature:
BLAST of Chy9G163660 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G163660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6721.1e-0956.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G067765 PE=4 SV=1[more]
BLAST of Chy9G163660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648490.15.09e-1456.72hypothetical protein Csa_009231 [Cucumis sativus][more]
BLAST of Chy9G163660 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G163660.1Chy9G163660.1mRNA