Chy9G163550 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G163550
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cell division topological specificity factor homolog, chloroplastic-like
Location	chrH09: 8163092 .. 8166600 (-)
RNA-Seq Expression	Chy9G163550
Synteny	Chy9G163550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACAATTCTCACCCTCTCCGCCCTTCTTTTCCTTCTTCAAAGGTCCCCAATTTCTCTTCTTTCTCTCTCTCTTTCTCCTTCTATTTGTGTACCTAGAATTTGGTGGCTGCAAGTTATGGGGTTCTGGATTCTGTGTTTAAATGCCTTCTTTCTTGCCCATTTCTTCTTTTGGTTGTATTGGAGGCCCTACCTCTGCACTTGGATCTTTTCCCATTGTTTTTATTTCCAGATTTCTAGGTTTTTCTGTGACCTGTAGCCCCTTTTTTTTCTCAACTTAGCTCGTCAATCGCTAGTTTTATTATAAATGCTCTAGTTCACACTTGGGGCTTAATTCCACGTATCCGATGTCTCTGCAGGACGAGCTTTCAGTGGCCGATAGCTATTGGATTGGCAAACATAAACCCCTCCCTATTTACAAGTTTTACCGTTTTATTCCAATTATAAATATACAGATCTTAGATGTTGTTCTTTGTGTAAGAATTATTGTGGTTTTAGCCAAGATTGTGATCTTGTACTTGGGTAGACATAGCCAAAATTGACATTTTCTTCTGTTTTGTGAAGATTAAATTAGCTCGGACTGGTACGAAAATTTGCTTTTAGGTGGATATCTGGATGGATTTTTCTTTCTCAGAGCGGCTTTATTCCTTATTTATATGCTATCTCAATGAATAAAGGGTGCCTCCATATCAGATTTCTGTATTTTTGAAAGTCAATGTTGGAATCGGAGCGTGGAGAGAGGGTGTTTTCATATAGTGTTTAGCATTGGTTATCCCTCCTAGAGAGAACTAATTTGGTTCATCTAGGAAGAGACCACAGTAAAATTCTCTGGTCCCAAAGCTTGGTAAGTTCACCTCTTAATTGGCGTTCGTTAATGCCAAGCTCATGTCGCCTAAGCAGAATTACCCTTGGGTGATACTTGTGTAGAAATTTATAATTCTTTATAAACTGAAGTTGTTTCTTTGTGGTTGGCTTACAAAAATCTGAATACCCCAGAGAAGCTTTAAAAAAAAATGCTCGGTGGGTCTGTGATGATAGATTATAAGGCTTTTTTCTAGAAATGAAATTAAAGAAATATTTGTCTGGTTGGCTATATTACCAGTGCTTCAAGGAAGATGAGTCCTTGGACGATCACTCTCTTCATTGCCCATTTGTGTTGAAAGGATGGGAGTTTCATTTTCCAAAGATTGGACTTGTCTTTTGAAGCTTTTGTTATGGGGTGCTGATAAAGGAAAGGCAAGACTCCGTGGAACTGTGAAGAGCTCTTATGGCACGGGGATAAATCTTTAGATTTTCTTAAGATTTAATCTTCGCTTGATTGTTTCTGTAACAGCGTACGACTTATATGTTTACTGGTGTTGCTCCCCACCCATGGGCAATGCTTTTGTAACTAGGACCCTTTGATGATTATTAATGATTGGATAATAGGGAGATATATATTTGAGATTTCAGATTCACAGGTTTTGGACAGGTGGTGGCAAAACTCACCGGTCTAAAAAGGAACGGTTGATGGATGATGAAATGTGGGGTTTGACGAAATTAGTAATGCAACTGTGGAAGCAGGAGAATAGTAGATGTTATGGTTATGACTGAAGTTGAATAACATTTTTATTTGTTGAGATTATGGTTTTCCATTCAAGGAAGGAGTAATATATTTTTTAAAATCATCTTGGGTAAAAGAATGAGGTTGAACTTAGACTTCTATTGTAAAGGGAATTGTTTCGGGAAGTAGGTGTAGAATTTAGTTATTTAGATGGGAGATAATGATTAGCTTCCAAGAATCCGACTTCAGTTGTGGGATAAAGAAAAAGAGAAGTTGTAAAGATTAGCGAATTGGATGGAGTTTTAACATTAAATTACAGATTTCATACTTTAAGAGGGAAAAGTCACGTGGAGAGTGGTAGATGGAGGAGGAGGACAATTGATTGGGATGAAATAGAATGAAAGATTTCAGAAATTTTCTAGGACTTCATGAAAAATCACATTTGATTTCCATTGTTGCAATTTTTTATTGGCCACGAAGTTTCTTGAAATTGGAGATATCCTAATGATGGGAAGACACTTCTCTAGATGTTTGGATGGGGATTCCCGCTATCTTGCGCTTAGCTGTTCTTTTGTGCCTTCTGTGTTCAATATATTTCTCGTGTTCTTATCAAATAAATTGTTGGGAGATCCACCTCCTAAAACTAGGTTTAGGACATAGTGAAGAATGTGAATACATGATGTAAAATCGGATTATTCCTTATCATGTTGTGGTGATGGATTACTTTTCATTAAACTGACCAAATCACAGTGCACAGTATCTAGTGAAAGTTGTTTTCATAAAAAAAAAAAAGAAGTATTTCTTCCTGTTCTGACGACTGTGAGATAGTTACACACTAGTGAAAAGAGTTGGGATAGCATAGCAGTTCGTTTCTATTTCATCTTTGATTATTGTTCAAATATAAATATTTGATAATTTTACACCGAACCAGAAGGAAAATCATAGAGATACAAGCCTAAGAAAAAATATTCAAAAGCTCACCTTCTCTCCCAACTCTAACTTCTTAGTCTAAAATTGTCCTCCCTTGTGTCTTAGCTTATAAATATTCCTTTGATTATCACTACTTGCTGGCCTAATAACGAAGTCAGTTGGAACTCACTACTTACTGGCTTAATGGGTTTCACCATTATCTCCTGCTGTAGATATTAAAGTTTTATCAATAACATCATGGAACCAGAAAGAGCACCGTCACAGATCATGCATCTCAGAATGATTCCTGTTCTTTAACTGAAACGACTAATTCATTGTCATTGGAAACTCTGCTAAAATTTGATTTTGAAACACTTGCATATGCCTTGCTGCTTATTTCAGCATTTGTGCTTGCTCTTAGGTTGAATTCTCTGGATTTTCATGTGGAGGGCCTAGCAGTCATGAAGTTGCACTTAAATGGCGAAACACGGCAATTGATAGTCGCAATAGGCGTGGCATTTCACAGATAACTACTGGGAGCTCAGAAAGTTTTGAACTGTCATCAAAAAGATCAAGTCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAAGTCCAGCATCAAAGAGAAACTCCAATGCTTTGATTGCCAAGCAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGGAAGATTGTTAGCAATATTGTACGAGCTCTATCAGATTTTGTAGAAATTGAATCGAAAGATAAAGTTCAGTTGAGCATGTCCACGGATTCTGATCTAGGAACCATTTACTCTGTCACGGTACCTGTGAGGAGAGTAAAAGCAGAATATCAAGAAGCAGATGAGAGTGGAACGATAACAAACATAGAGTACAAAGATAATGGAGAGACGTCTGGCTCTGTTGATGTGAGGTTTGATTTCTTCATTCCAGATTGA

mRNA sequence

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACAATTCTCACCCTCTCCGCCCTTCTTTTCCTTCTTCAAAGGTTGAATTCTCTGGATTTTCATGTGGAGGGCCTAGCAGTCATGAAGTTGCACTTAAATGGCGAAACACGGCAATTGATAGTCGCAATAGGCGTGGCATTTCACAGATAACTACTGGGAGCTCAGAAAGTTTTGAACTGTCATCAAAAAGATCAAGTCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAAGTCCAGCATCAAAGAGAAACTCCAATGCTTTGATTGCCAAGCAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGGAAGATTGTTAGCAATATTGTACGAGCTCTATCAGATTTTGTAGAAATTGAATCGAAAGATAAAGTTCAGTTGAGCATGTCCACGGATTCTGATCTAGGAACCATTTACTCTGTCACGGTACCTGTGAGGAGAGTAAAAGCAGAATATCAAGAAGCAGATGAGAGTGGAACGATAACAAACATAGAGTACAAAGATAATGGAGAGACGTCTGGCTCTGTTGATGTGAGGTTTGATTTCTTCATTCCAGATTGA

Coding sequence (CDS)

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACAATTCTCACCCTCTCCGCCCTTCTTTTCCTTCTTCAAAGGTTGAATTCTCTGGATTTTCATGTGGAGGGCCTAGCAGTCATGAAGTTGCACTTAAATGGCGAAACACGGCAATTGATAGTCGCAATAGGCGTGGCATTTCACAGATAACTACTGGGAGCTCAGAAAGTTTTGAACTGTCATCAAAAAGATCAAGTCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAAGTCCAGCATCAAAGAGAAACTCCAATGCTTTGATTGCCAAGCAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGGAAGATTGTTAGCAATATTGTACGAGCTCTATCAGATTTTGTAGAAATTGAATCGAAAGATAAAGTTCAGTTGAGCATGTCCACGGATTCTGATCTAGGAACCATTTACTCTGTCACGGTACCTGTGAGGAGAGTAAAAGCAGAATATCAAGAAGCAGATGAGAGTGGAACGATAACAAACATAGAGTACAAAGATAATGGAGAGACGTCTGGCTCTGTTGATGTGAGGTTTGATTTCTTCATTCCAGATTGA

Protein sequence

MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRRGISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYSVTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD*

Homology

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BLAST of Chy9G163550 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 143/227 (63.00%), Postives = 174/227 (76.65%), Query Frame = 0


Query: 4   SGDLRVSATLCS--HNSHPLRPSFP--SSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNR 63
           SG LR+SATL S  H+ H  R S P  SSKV+F+GF   G +S E        AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 64  RGISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNA 123
           RG  ++   ++  +ELS   + QE E+FL NAINM FF+RLNLAW+I+FPS AS+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 124 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIY 183
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KVQL++STD DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 184 SVTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           SVTVPVRRVK EYQ+ DE+GTITN+EYKD  +  GSVDVRFDF++P+
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229

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BLAST of Chy9G163550 vs. ExPASy TrEMBL
Match: A0A0A0KQJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469010 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITTGSSESFELSSK SSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

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BLAST of Chy9G163550 vs. ExPASy TrEMBL
Match: A0A1S3CPL3 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503356 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.0e-117
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAID RNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDRRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITTGSSESFELSSK SSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

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BLAST of Chy9G163550 vs. ExPASy TrEMBL
Match: A0A6J1E0P8 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024862 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDL VSATLCSH+  PLR SFPSSKVEFSGFS GGPSSHEV LKW N AIDSRN+R
Sbjct: 1   MAVSGDLGVSATLCSHHPQPLRTSFPSSKVEFSGFSSGGPSSHEVVLKWHNMAIDSRNKR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           G+SQITTGSS S+ELSSK SSQEAETFLLNAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GVSQITTGSSGSYELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           +TVPVRRVKAEYQEADESGTITNIEYKD GETSGSVDVRFDFFIP+
Sbjct: 181 ITVPVRRVKAEYQEADESGTITNIEYKDKGETSGSVDVRFDFFIPE 226

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BLAST of Chy9G163550 vs. ExPASy TrEMBL
Match: A0A6J1G2G6 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450227 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+ HP R SFPS KVEFSGFS GG SSH+VALKWRN AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPRRTSFPSPKVEFSGFSSGGLSSHDVALKWRNMAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITT SSES+E+SSK SSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDVRFDFFIPD 226

[Close]

BLAST of Chy9G163550 vs. ExPASy TrEMBL
Match: A0A6J1KCP8 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493725 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 206/226 (91.15%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+ HP R SFPSSKVEFSGFS GG  SH+VALKW N AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITT SSES+E+SSK SSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDVRFDFFIPD 226

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BLAST of Chy9G163550 vs. NCBI nr
Match: XP_004143776.1 (cell division topological specificity factor homolog, chloroplastic [Cucumis sativus] >KGN51159.1 hypothetical protein Csa_007875 [Cucumis sativus])

HSP 1 Score: 436 bits (1120), Expect = 9.28e-154
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITTGSSESFELSSK SSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226
           VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

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BLAST of Chy9G163550 vs. NCBI nr
Match: XP_008465747.1 (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Cucumis melo])

HSP 1 Score: 434 bits (1115), Expect = 5.37e-153
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+SHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAID RNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDRRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           GISQITTGSSESFELSSK SSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226
           VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Chy9G163550 vs. NCBI nr
Match: XP_038891141.1 (cell division topological specificity factor homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 423 bits (1088), Expect = 7.01e-149
Identity = 216/226 (95.58%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSAT CSH+SHPLRPSFPSSKVEFSGFS GGPSSHEVALKW+NTAIDSRNRR
Sbjct: 1   MAVSGDLRVSATFCSHHSHPLRPSFPSSKVEFSGFSSGGPSSHEVALKWQNTAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           G+SQITTG+SESFELSSK SSQEAETFLLNAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GVSQITTGNSESFELSSKSSSQEAETFLLNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKR+IVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRRIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226
           VTVPVRRVKAEYQEADESGTITNI+YKDNGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIKYKDNGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Chy9G163550 vs. NCBI nr
Match: XP_022158361.1 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 404 bits (1039), Expect = 2.06e-141
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDL VSATLCSH+  PLR SFPSSKVEFSGFS GGPSSHEV LKW N AIDSRN+R
Sbjct: 1   MAVSGDLGVSATLCSHHPQPLRTSFPSSKVEFSGFSSGGPSSHEVVLKWHNMAIDSRNKR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           G+SQITTGSS S+ELSSK SSQEAETFLLNAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GVSQITTGSSGSYELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226
           +TVPVRRVKAEYQEADESGTITNIEYKD GETSGSVDVRFDFFIP+
Sbjct: 181 ITVPVRRVKAEYQEADESGTITNIEYKDKGETSGSVDVRFDFFIPE 226

[Close]

BLAST of Chy9G163550 vs. NCBI nr
Match: XP_023520464.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1035), Expect = 8.40e-141
Identity = 207/226 (91.59%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHNSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60
           MAVSGDLRVSATLCSH+ HP R SFPSSKVEFSGFS GG SSH+VALKWRN AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPRRTSFPSSKVEFSGFSSGGLSSHDVALKWRNMAIDSRNRR 60

Query: 61  GISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120
           G+SQITT SSES+E+SSK SSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GVSQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDVRFDFFIPD 226

[Close]

BLAST of Chy9G163550 vs. TAIR 10
Match: AT1G69390.1 (homologue of bacterial MinE 1 )

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-69
Identity = 143/227 (63.00%), Postives = 174/227 (76.65%), Query Frame = 0


Query: 4   SGDLRVSATLCS--HNSHPLRPSFP--SSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNR 63
           SG LR+SATL S  H+ H  R S P  SSKV+F+GF   G +S E        AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 64  RGISQITTGSSESFELSSKRSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNA 123
           RG  ++   ++  +ELS   + QE E+FL NAINM FF+RLNLAW+I+FPS AS+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 124 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIY 183
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KVQL++STD DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 184 SVTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 227
           SVTVPVRRVK EYQ+ DE+GTITN+EYKD  +  GSVDVRFDF++P+
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229

The following BLAST results are available for this feature:

BLAST of Chy9G163550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C4Z7	3.3e-68	63.00	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]

BLAST of Chy9G163550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQJ9	1.0e-117	99.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469010 PE=3 SV=1	[more]
A0A1S3CPL3	4.0e-117	98.67	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]
A0A6J1E0P8	2.6e-108	92.04	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A6J1G2G6	2.2e-107	91.59	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]
A0A6J1KCP8	1.4e-106	91.15	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]

BLAST of Chy9G163550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143776.1	9.28e-154	99.12	cell division topological specificity factor homolog, chloroplastic [Cucumis sat...	[more]
XP_008465747.1	5.37e-153	98.67	PREDICTED: cell division topological specificity factor homolog, chloroplastic-l...	[more]
XP_038891141.1	7.01e-149	95.58	cell division topological specificity factor homolog, chloroplastic [Benincasa h...	[more]
XP_022158361.1	2.06e-141	92.04	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
XP_023520464.1	8.40e-141	91.59	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]

BLAST of Chy9G163550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69390.1	2.3e-69	63.00	homologue of bacterial MinE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 104..185 e-value: 7.5E-7 score: 30.7
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 121..186 e-value: 5.7E-13 score: 48.7
IPR005527	Cell division topological specificity factor MinE	PANTHER	PTHR33404	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 1..226
None	No IPR available	PANTHER	PTHR33404:SF9	BNAC06G30560D PROTEIN	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G163550.1	Chy9G163550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0051301	cell division