Chy9G162540 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCAGAAGAAGCAGCTATGGAACAAGAGAAGAAGCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCAGAAGGTATTTTCCCTTCTTCTTCTTCTTGTTCTTCATCAATCTCTCTCAGGCTCTAAATTTATTGTTTTTTTTAATTGCTGCTCTTTAATGTGTCATTGCTCTGCTTGAGTTCTTTAAGGTGCCAATCAATCGTATTTCCATGCCATACCCTGAAAAATTAGTGAATTTAGGGTTGCGTTGAATCACTTTTGGGAATTTGGAAACCTCTAGGATTCATTCAATTTTGAGAGGTAATTAGGAATAAATTCCTCTGTTCTTTGCAGAATAATGGGTCTAAATTTTGTCTAAACTCAATTCGGCTTAAGTTTTGGAAAGGGATTTAAGAGAAAAACAAATTTAGAATAAACAACCAAACAGGCAACAAACTCGAAGAAACTACGATATCACATTACTAGACACAAACAAGATACACCTCCAAATTTTATGTACTAAAGGGTGCGCTAGTGTATTTTTGGTTGTGGCAAATATCTGAGTAAGAGACAATTCTTAATTCACCATCATTACAAACTTATGCCTTATCAATAAAAAAGAGACTTCTGAAATGTCGACCAAATCATCATTTTGGAGTTAAACAATCTCAAAACAGTGAGATTCAACTAGGATATATTAGGTGAGGAAAAGGAATTCGGCGATGAGAAACTATCGTGTGGGTTTGTTTGACCTAGTAGAAAAAATGGAAACAGTCTCAATAACTCTCAATAACTAACTAAATGGACATGAGTCCAATTCATAGTAGCCACCTACCTAAATTAATTTCTTATGAGTTTTCTTGACACCCAAATGTTGTAGGGTAAGGTAAATTGTTGGTGAGATTACTCGAAGTGCATGTAAGCTGACTCGGACACTTACAGATATCAGAAAAAGAAAAGAAATGTTTGAATGTATAAAATACAGAGATAATCCTAGCCTTCTGTGAGGGACTAGGATTATTTTGTTTTGTTTTCATTTTTTTTTTATTAAGAAACCAGCTTTAGGGCCCATAAAAAAAGAACAACTATTAACGGAGCAAAGTAGAAGAGAAGAAAAAAATTATAATAGAACAAGATTACTAGAGATTGCGTCTACACTCAACTATTAAGAATAAAAAAATGAGGATAGTTACATTGAAATTTGCTGCATTCTAAATCTCTTCCCAAAATTCTTGTTGACTGCTGAAAGATTCCCTTGATTCTCTCAAGCCATAAATTTCACAATTTAATGAAGAATCTAGCATCCCACGGCCAGATAATAAATCTTTTTCTTACCGAAGGAGGAATTCACCAATACCTCCTCAATACCCCTATAATTTCTGGGAGGAACAGTGACTCCAAACTTATTCAAGAAATTTCTCCATAGTGTCAAATATCAACCAATGCAAAGCGGCAACTTCAAATCAGATGAATAATTTCCTCTGTAGATCTTTTTCATACATCATATCCCACACGCCACTCTCAATGGGACATAAAACCATGGATGGAGATCTTTGAATGAAGTTACAATGTTTAACCTTCCCAAAGAAACCGATAAAGCGAAGAACCTAACCTTTGGATTTTTCCAAATTATGGTGAAGAAAGAGGAGACAGAAGGATTGGATTCAGACACCTAATGGGCAACAAGAGAATTAGTAGAGAACACTCTGTTAGATACCTAGATTTAGATAGGGCTAAGGGTAGTTAGTTATATAGACAGTTAGATGGTTATAGGAAGTTGGGGAGGGAAGAAAGGCATGAAGAATTTGGTGAAGATAATGGGCTGCAACATTCTTTGAAAGAAAGGAAGGGCAGAGGGTTAGGGTTCTTTTACTTGTTTGTTCTTTTATATTGTAATTTCTGTTTGAGATATCAATAAAATGTAAACACTATATCAGTGTTCTACTATCACACTCCTGAAGGATCAAGAGTCCATTGGAAGTTTGACATAGGCACATCCCTTGTAGCAGAAAGGAGATTGGCCTAATATGAGATTCATGATCATTAGTAGTCTTCCAAAATGAAAAGTCATGATCATTATGGATGGTCGATGTAGAAGAACTATAATTGAGAGGATTAAGACAGAATTGACAAGCACCTCATTTCCAAGTCAAAATAAAGAGTTAGGTAAGAACTTGGGAAGAACTATTACCGTTCCTAAGTCCACCGAGAATCAGACATGCGTTCCATTTTCCATGGAAATTTTAACGAAATTGTTAAAGAAGATCAGTGAAATTCTATAGAAAATACCTTCTGTATGTAAGTGGCTATCTTTGAATTTGGTGGCTATTAACGTTCTAAATCACATGTTTCAACAATTGATAGACCACATGAACTGCAGCTTCATTTTTGTTAAAGTTAATTAACCACTAAAACAAACCTAAGCCATTCCACCAGTCTTTTAAGAGTGATTTGTGTCAGTAAAGTTAATGAGTAGTTGATGTTTGACATCCTATTCCTAACCATTTTTTCTTATTTGCAGGATGCTGAGGCATCCGCTAAAAGCGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGTTGTTTGATAATTCTCAATATTGA ATGGGAGCAGAAGAAGCAGCTATGGAACAAGAGAAGAAGCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCCGCTAAAAGCGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGTTGTTTGATAATTCTCAATATTGA ATGGGAGCAGAAGAAGCAGCTATGGAACAAGAGAAGAAGCTCTCATCTCATAATCCAAGGACGGTTCCCATCACAGAGGCTCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCCGCTAAAAGCGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGTTGTTTGATAATTCTCAATATTGA MGAEEAAMEQEKKLSSHNPRTVPITEAQFLSWKRQKDAEASAKSDETARKRAEDIALGAVQMNGRELFLHQPWLFDNSQY* Homology
BLAST of Chy9G162540 vs. ExPASy Swiss-Prot
Match: Q54DA5 (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.7e-04 Identity = 25/72 (34.72%), Postives = 37/72 (51.39%), Query Frame = 0
BLAST of Chy9G162540 vs. ExPASy TrEMBL
Match: A0A0A0KN87 (DFRP_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G407070 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.4e-34 Identity = 75/80 (93.75%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Chy9G162540 vs. ExPASy TrEMBL
Match: A0A1S3CCP9 (zinc finger CCCH domain-containing protein 15 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499290 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.6e-31 Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Chy9G162540 vs. ExPASy TrEMBL
Match: A0A6J1FLL2 (zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445336 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30 Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Chy9G162540 vs. ExPASy TrEMBL
Match: A0A6J1CIH3 (zinc finger CCCH domain-containing protein 15 homolog OS=Momordica charantia OX=3673 GN=LOC111011797 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.5e-30 Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Chy9G162540 vs. ExPASy TrEMBL
Match: A0A6J1JUQ1 (zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita maxima OX=3661 GN=LOC111489071 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Chy9G162540 vs. NCBI nr
Match: XP_011655210.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >XP_011655211.1 zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >XP_011655212.1 zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >KGN51013.1 hypothetical protein Csa_009113 [Cucumis sativus]) HSP 1 Score: 152 bits (383), Expect = 4.20e-46 Identity = 75/80 (93.75%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Chy9G162540 vs. NCBI nr
Match: XP_008460490.1 (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902565.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902566.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 143 bits (361), Expect = 9.28e-43 Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Chy9G162540 vs. NCBI nr
Match: XP_022939418.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata] >XP_023549915.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita pepo subsp. pepo] >KAG6579014.1 hypothetical protein SDJN03_23462, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140 bits (354), Expect = 1.09e-41 Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Chy9G162540 vs. NCBI nr
Match: XP_022141384.1 (zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]) HSP 1 Score: 139 bits (349), Expect = 6.67e-41 Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Chy9G162540 vs. NCBI nr
Match: XP_022992866.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]) HSP 1 Score: 137 bits (345), Expect = 2.57e-40 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Chy9G162540 vs. TAIR 10
Match: AT1G22140.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 4.8e-17 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of Chy9G162540 vs. TAIR 10
Match: AT1G22140.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06 Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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