Chy9G162450 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATGTCGCACTTCCAATTAGTTTATGGATACTGGTTTTGATGATTTTGATGATTTTGATGATTTTGATGATTTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTGATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGCACTATCAGAAGTTCCAAAGGTTTTCATCCGTGTTCTTTCAATTTAAGGTTTTATTCTGTATTTTTTTTTTTTACACATTTTAGTATTTCGATCTGTGAAAATACAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGCAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTTTTTTAAATAGTCTATTTTGTCCAAGTTGCAAGCTTTATAACATCTTGGAGCCTCGTATGCATGATTTCTGATTTATGGGACTTGACTGCTCTTTTTCCTTTATAATGTTAGCACATCTTTCATCATTGTAGAATAAGAAAAACAGCTCTTATACTTGACGCAAATTAGAGTTAGCATTTTAGATAATCTGGGCAAATATTTACTTCGTTTGTAATTGTATATTTGAGTAACTTGATAAATTTGGTAATGGCTGGGTATTCTGCTACAAATAGTGCTCATAATGGGGCTTTCTGTGTTCAAATAAACTAATAATTCGGTGTGTAGTTTGTTCAATTGTTCACACTATAATCTTTGTAGAACTATTTGCCAGGTAGGTGCTACTTGCATACCTGTGAAGGAAGGCACAGATAGACACAGGAAAAATATTTTTATCGAGTGTCAGAGTGTCCAGATGTTGTAGGAGGTTATGGCTAAAAAAATGTCTATGCTTAGTTTTGTAATTTCCTATTGATTTGCTATCATTATCTTTCAACAGTTGTTTTGATCTTGGTATGCAGCCTATTGAATTAAATAGGTGGGTTTCTATCATTGGTAGTAATTGGTTTTCTTCTTACTCATAATATTTATGTTGGTCAATCAATTTAATTTTAACTCATTCCATTTATACATGTTTAGTTTAAATCTTAGTCAGTTAATTAGACTTGTATTGTTGATTTTTCTGCTTTACTTCTATGTATTTTCAGGCACTGTTGTTATTTGTATGTTTTATTTATTATTTTTGTTATTTATGTACGTTTAGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTACTACAAACTTTTTTATTCGGTTCATTAAATTTCATTTCTATTTCATTACAGTGGTCCTTATATTTCAGTTCTTGAAGTTTGCATAAACAATTGAAACAAAAATTAATATATGGCCATTTGATTTTCCTTTACTTTGTGAATTAATTTCGTACTGAGAGCATATATTTTCTGTGGTATTTTAGAGAACACGTGTAGTTGAGTGTTGGGTTTTTAAATGCAACACCTTGAAAATTGGCACCAAAATGATAAATCTGTTTAAGTTTAAATCAAAAATAGAAAATAGTGAAACATTTAGGCGTCTTATACTTGACTTTTATTGATTGGTTTACCAAGATTCCTCCCTTTCTTTCTTTTTCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA ATGGCGCCGGCGAAGAAGACCAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTGATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGCACTATCAGAAGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGCAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA ATGGCGCCGGCGAAGAAGACCAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTGATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGCACTATCAGAAGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGCAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ* Homology
BLAST of Chy9G162450 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 7.8e-55 Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 1.4e-51 Identity = 94/112 (83.93%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 2.4e-51 Identity = 95/111 (85.59%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 4.0e-51 Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 4.5e-50 Identity = 91/112 (81.25%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Chy9G162450 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Chy9G162450 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa]) HSP 1 Score: 228 bits (581), Expect = 2.63e-75 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Chy9G162450 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus]) HSP 1 Score: 226 bits (577), Expect = 1.07e-74 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Chy9G162450 vs. NCBI nr
Match: XP_022141723.1 (60S ribosomal protein L30-like [Momordica charantia]) HSP 1 Score: 223 bits (568), Expect = 2.54e-73 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Chy9G162450 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222 bits (566), Expect = 5.12e-73 Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Chy9G162450 vs. NCBI nr
Match: XP_022990953.1 (60S ribosomal protein L30-like [Cucurbita maxima]) HSP 1 Score: 221 bits (564), Expect = 1.03e-72 Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Chy9G162450 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 203.4 bits (516), Expect = 9.8e-53 Identity = 94/112 (83.93%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of Chy9G162450 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 201.8 bits (512), Expect = 2.9e-52 Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of Chy9G162450 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 198.4 bits (503), Expect = 3.2e-51 Identity = 91/112 (81.25%), Postives = 106/112 (94.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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