Chy9G162200 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G162200
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type E3 ubiquitin transferase
Location	chrH09: 5005195 .. 5005537 (+)
RNA-Seq Expression	Chy9G162200
Synteny	Chy9G162200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGAGAATGGACATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAAATGTGCAACCTGCTCGTGGCCTATTGGCTATAATCGTTGTCGAGCGGTTGAGAAGGTTCTTGAATCCATTAAATTTCCCTGCAAACAATCAAAGTTTGGATGCAAGGAGATCATTGGTTATGGCAATGAAAGTGACCACAAAAAGACATGCCTATATGCCCCTTGTTTATGCCCCTATTTTGATTGCAAATTTATGGCCTCATCTAAGCAGTTATCATTACACTTTAGCAATAAACATACAGACTCTGCTACCAACTTCCATTTCAGTTCTAGCTTCACCATTTGCTTAA

mRNA sequence

TGTGAGAATGGACATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAAATGTGCAACCTGCTCGTGGCCTATTGGCTATAATCGTTGTCGAGCGGTTGAGAAGGTTCTTGAATCCATTAAATTTCCCTGCAAACAATCAAAGTTTGGATGCAAGGAGATCATTGGTTATGGCAATGAAAGTGACCACAAAAAGACATGCCTATATGCCCCTTGTTTATGCCCCTATTTTGATTGCAAATTTATGGCCTCATCTAAGCAGTTATCATTACACTTTAGCAATAAACATACAGACTCTGCTACCAACTTCCATTTCAGTTCTAGCTTCACCATTTGCTTAA

Coding sequence (CDS)

TGTGAGAATGGACATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAAATGTGCAACCTGCTCGTGGCCTATTGGCTATAATCGTTGTCGAGCGGTTGAGAAGGTTCTTGAATCCATTAAATTTCCCTGCAAACAATCAAAGTTTGGATGCAAGGAGATCATTGGTTATGGCAATGAAAGTGACCACAAAAAGACATGCCTATATGCCCCTTGTTTATGCCCCTATTTTGATTGCAAATTTATGGCCTCATCTAAGCAGTTATCATTACACTTTAGCAATAAACATACAGACTCTGCTACCAACTTCCATTTCAGTTCTAGCTTCACCATTTGCTTAA

Protein sequence

CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGNESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICLX

Homology

[Close]

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot
Match: Q9FKD7 (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.5e-29
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+ACSSCC KL NKC  C+ P+G+NRCRA+E VLESI  PC  +K GCK+ + YG 
Sbjct: 65  CDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGK 124

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTD 100
           E  H+K C+++ C CP  DC + +S K L  H+   H +
Sbjct: 125 ELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHME 163

[Close]

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot
Match: Q84K34 (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-28
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+AC+ CC K++N+C +C+ PIGY RCRA+EKV+E+ +  C  +K+GCKE   YGN
Sbjct: 127 CDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGN 186

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
              H++ C++ PC CP  DC +    K L+ H   +H D   +F +++  TI L
Sbjct: 187 RFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISL 240

[Close]

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot
Match: Q9FKD9 (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-27
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C NGH+ACSSCC KL+NKC  C+ P+G+ RCRA+E+VLES+  PC+ +  GC + I YG 
Sbjct: 59  CGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGR 118

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFS 108
           ES H+K C ++PC CP   C +  S K L  H+   H+  +T + F+
Sbjct: 119 ESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFN 165

[Close]

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot
Match: Q9FKD5 (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+AC SCC KL NKC  C+ P+G++R RA+E VLESI  PC   +FGC +   YG 
Sbjct: 52  CDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGK 111

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHT 99
           ES H+K C+++ C CP   C +  S K L  H+   H+
Sbjct: 112 ESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHS 149

[Close]

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot
Match: Q7XA77 (E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g66660 PE=2 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C NGH+ACSSCC KL  KC+ C   IG  RCRA+EKV+E+   PC  +K GCKE   Y N
Sbjct: 100 CSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCN 159

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLH-FSNKHTDSATNFHF 107
           +S H+K C +  C CP  +C +++S   L  H  S  H     + HF
Sbjct: 160 QSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAHVWGEDDIHF 206

[Close]

BLAST of Chy9G162200 vs. ExPASy TrEMBL
Match: A0A1S3CD49 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.3e-60
Identity = 108/114 (94.74%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIK PCKQSKFGCKEIIGYGN
Sbjct: 128 CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKLPCKQSKFGCKEIIGYGN 187

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
           ESDH+KTCLYAPCLCPY DCKF+AS+KQLSLHFSNKHT+SATNFHFSSSFTICL
Sbjct: 188 ESDHEKTCLYAPCLCPYSDCKFIASAKQLSLHFSNKHTNSATNFHFSSSFTICL 241

[Close]

BLAST of Chy9G162200 vs. ExPASy TrEMBL
Match: A0A6J1CL96 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111011997 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.0e-54
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKNKCA+CSWPIGYNRCRAVEKVLESIK PCKQS++GCKE++ YGN
Sbjct: 155 CENGHIACSSCCNKLKNKCASCSWPIGYNRCRAVEKVLESIKLPCKQSQYGCKEMVSYGN 214

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
           ES+H+KTCLYAPCLCP  DC F ASSKQLSLHFS+KH +SATNF FSSSFTICL
Sbjct: 215 ESEHEKTCLYAPCLCPLSDCNFTASSKQLSLHFSSKHKNSATNFQFSSSFTICL 268

[Close]

BLAST of Chy9G162200 vs. ExPASy TrEMBL
Match: A0A6J1JTG5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487698 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKN+CATCSWPIGYNRCRAVEKVLESI+ PCKQSK+GCKEI+ YG+
Sbjct: 130 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIRLPCKQSKYGCKEIVSYGS 189

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
           ESDH K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F FSSSFTICL
Sbjct: 190 ESDHDKKCLHAPCKCPLSDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICL 243

[Close]

BLAST of Chy9G162200 vs. ExPASy TrEMBL
Match: A0A6J1GYB0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458302 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 95/114 (83.33%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKN+CATCSWPIGYNRCRAVEKVLESIK PCKQSK+GCKE++ YG+
Sbjct: 130 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGS 189

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
           ESDH+K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F FSSSFTICL
Sbjct: 190 ESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICL 243

[Close]

BLAST of Chy9G162200 vs. ExPASy TrEMBL
Match: A0A5B7BYT9 (RING-type E3 ubiquitin transferase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041674 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.4e-39
Identity = 74/114 (64.91%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCC KL NKC +CSWPIGYNRCRA+EKVLES+K  C   K+GCKE + Y  
Sbjct: 143 CENGHIACSSCCTKLLNKCPSCSWPIGYNRCRAIEKVLESVKIRCSNKKYGCKETVSYSR 202

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
           E+ HK+TC+YAPC CP  DC F+ SSK LSLHF  KH+DSA  F ++  F I L
Sbjct: 203 ENCHKETCMYAPCSCPLPDCDFIGSSKHLSLHFRTKHSDSAKLFCYNCLFPISL 256

[Close]

BLAST of Chy9G162200 vs. NCBI nr
Match: XP_008460511.1 (PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo])

HSP 1 Score: 238 bits (606), Expect = 9.29e-76
Identity = 108/114 (94.74%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIK PCKQSKFGCKEIIGYGN
Sbjct: 128 CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKLPCKQSKFGCKEIIGYGN 187

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 114
           ESDH+KTCLYAPCLCPY DCKF+AS+KQLSLHFSNKHT+SATNFHFSSSFTICL
Sbjct: 188 ESDHEKTCLYAPCLCPYSDCKFIASAKQLSLHFSNKHTNSATNFHFSSSFTICL 241

[Close]

BLAST of Chy9G162200 vs. NCBI nr
Match: XP_038874338.1 (putative E3 ubiquitin-protein ligase SINA-like 6 [Benincasa hispida])

HSP 1 Score: 234 bits (597), Expect = 2.26e-74
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEI+GYGN
Sbjct: 129 CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIVGYGN 188

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 114
           ESDH+KTCLYAPCLCP+ DC FMASSKQLSLHFSNKHT+SATNF F+SSFTICL
Sbjct: 189 ESDHEKTCLYAPCLCPHSDCNFMASSKQLSLHFSNKHTNSATNFQFNSSFTICL 242

[Close]

BLAST of Chy9G162200 vs. NCBI nr
Match: XP_022141698.1 (E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia])

HSP 1 Score: 216 bits (550), Expect = 6.54e-67
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKNKCA+CSWPIGYNRCRAVEKVLESIK PCKQS++GCKE++ YGN
Sbjct: 155 CENGHIACSSCCNKLKNKCASCSWPIGYNRCRAVEKVLESIKLPCKQSQYGCKEMVSYGN 214

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 114
           ES+H+KTCLYAPCLCP  DC F ASSKQLSLHFS+KH +SATNF FSSSFTICL
Sbjct: 215 ESEHEKTCLYAPCLCPLSDCNFTASSKQLSLHFSSKHKNSATNFQFSSSFTICL 268

[Close]

BLAST of Chy9G162200 vs. NCBI nr
Match: XP_023534163.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213 bits (542), Expect = 9.66e-66
Identity = 96/114 (84.21%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKN+CATCSWPIGYNRCRAVEKVLESIK PCKQSK+GCKEI+ YG+
Sbjct: 159 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEIVSYGS 218

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 114
           ESDH+K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F FSSSFTICL
Sbjct: 219 ESDHEKKCLHAPCKCPLSDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICL 272

[Close]

BLAST of Chy9G162200 vs. NCBI nr
Match: XP_022990964.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima])

HSP 1 Score: 211 bits (537), Expect = 2.47e-65
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           CENGHIACSSCCNKLKN+CATCSWPIGYNRCRAVEKVLESI+ PCKQSK+GCKEI+ YG+
Sbjct: 130 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIRLPCKQSKYGCKEIVSYGS 189

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 114
           ESDH K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F FSSSFTICL
Sbjct: 190 ESDHDKKCLHAPCKCPLSDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICL 243

[Close]

BLAST of Chy9G162200 vs. TAIR 10
Match: AT5G37890.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 127.9 bits (320), Expect = 5.3e-30
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+ACSSCC KL NKC  C+ P+G+NRCRA+E VLESI  PC  +K GCK+ + YG 
Sbjct: 65  CDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGK 124

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTD 100
           E  H+K C+++ C CP  DC + +S K L  H+   H +
Sbjct: 125 ELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHME 163

[Close]

BLAST of Chy9G162200 vs. TAIR 10
Match: AT5G37930.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+AC+ CC K++N+C +C+ PIGY RCRA+EKV+E+ +  C  +K+GCKE   YGN
Sbjct: 127 CDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGN 186

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFSSSFTICL 115
              H++ C++ PC CP  DC +    K L+ H   +H D   +F +++  TI L
Sbjct: 187 RFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISL 240

[Close]

BLAST of Chy9G162200 vs. TAIR 10
Match: AT5G37870.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C NGH+ACSSCC KL+NKC  C+ P+G+ RCRA+E+VLES+  PC+ +  GC + I YG 
Sbjct: 59  CGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGR 118

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFS 108
           ES H+K C ++PC CP   C +  S K L  H+   H+  +T + F+
Sbjct: 119 ESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFN 165

[Close]

BLAST of Chy9G162200 vs. TAIR 10
Match: AT5G37910.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 114.0 bits (284), Expect = 8.0e-26
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C+NGH+AC SCC KL NKC  C+ P+G++R RA+E VLESI  PC   +FGC +   YG 
Sbjct: 52  CDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGK 111

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHT 99
           ES H+K C+++ C CP   C +  S K L  H+   H+
Sbjct: 112 ESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHS 149

[Close]

BLAST of Chy9G162200 vs. TAIR 10
Match: AT1G66660.2 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-24
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 1   CENGHIACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKFPCKQSKFGCKEIIGYGN 60
           C NGH+ACSSCC KL  KC+ C   IG  RCRA+EKV+E+   PC  +K GCKE   Y N
Sbjct: 120 CSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCN 179

Query: 61  ESDHKKTCLYAPCLCPYFDCKFMASSKQLSLH-FSNKHTDSATNFHF 107
           +S H+K C +  C CP  +C +++S   L  H  S  H     + HF
Sbjct: 180 QSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAHVWGEDDIHF 226

The following BLAST results are available for this feature:

BLAST of Chy9G162200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKD7	7.5e-29	51.52	E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g3...	[more]
Q84K34	3.7e-28	43.86	E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q9FKD9	2.4e-27	47.66	Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702...	[more]
Q9FKD5	1.1e-24	47.96	Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702...	[more]
Q7XA77	1.4e-22	45.79	E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g6...	[more]

BLAST of Chy9G162200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CD49	2.3e-60	94.74	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 ...	[more]
A0A6J1CL96	7.0e-54	85.09	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101199...	[more]
A0A6J1JTG5	2.3e-52	83.33	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487698 P...	[more]
A0A6J1GYB0	2.3e-52	83.33	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458302...	[more]
A0A5B7BYT9	6.4e-39	64.91	RING-type E3 ubiquitin transferase (Fragment) OS=Davidia involucrata OX=16924 GN...	[more]

BLAST of Chy9G162200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460511.1	9.29e-76	94.74	PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo]	[more]
XP_038874338.1	2.26e-74	92.98	putative E3 ubiquitin-protein ligase SINA-like 6 [Benincasa hispida]	[more]
XP_022141698.1	6.54e-67	85.09	E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia]	[more]
XP_023534163.1	9.66e-66	84.21	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita pepo subsp. pepo]	[more]
XP_022990964.1	2.47e-65	83.33	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima]	[more]

BLAST of Chy9G162200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37890.1	5.3e-30	51.52	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37930.1	2.7e-29	43.86	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37870.1	1.7e-28	47.66	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37910.1	8.0e-26	47.96	Protein with RING/U-box and TRAF-like domains	[more]
AT1G66660.2	9.8e-24	45.79	Protein with RING/U-box and TRAF-like domains	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 30..103 e-value: 1.7E-15 score: 57.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 35..93 e-value: 1.7E-14 score: 55.7
None	No IPR available	PANTHER	PTHR46632:SF16	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 1..114
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 40..104
IPR044286	E3 ubiquitin-protein ligase SINA-like, plant	PANTHER	PTHR46632	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 1..114
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 40..98 score: 13.451708

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G162200.1	Chy9G162200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding