Chy9G162170 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G162170
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plastid movement impaired 2
Location	chrH09: 4955727 .. 4957589 (-)
RNA-Seq Expression	Chy9G162170
Synteny	Chy9G162170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATACTATCGGGGGAAGAAAGAGAGTAAAGGTAATGAAAGTGGATGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCAGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAAGAAGAAGATTTATTTTCTTTTACAGTTGCCCAAAATCGCCGCCGATAATCGTCCCCCGCCCGATCGGATTCCGAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTTCCACCGCGACGACGGTGGACTCCTCTGCTCAGCCGCGCTTCCATAGTGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACAGCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGGTACGTTTTTTTCTTCCAAATTTTCGCTTCATTCATTTTACTTTTCTCAAATTACCATATTTACTAACTAATTTCAACAAAATTTGATTTAAGTGAACTAAATTTAAGATATATGAAATATGTGATTGTTATTTTCATTAAAGTTATGGGTATATAAGTTTTGGGTACGAACATTTAAAAATTTTATAATTAAAGATTAAAGGAAATAAAAAAAAAAAGAAAAAGGAATGATAGCTTAACAAGAAAATGAACAACTCAACAAACTGTGCGTGGGCTAATTGTTGGAATCTTAACAACCGAAAGTTATATTAAAATGTAAATTAGATGAATTAAAAATGATTGATTAGTTTGGAAGGTAATAAATTTAACCAAAAAAAAAAAAAAATTGAATTCCTAACCTTTGATTTTCTTTTTCATCTCTGTTTGACTCCCAACGGGTAAACGACGGTGTATACCTTTTACAATTTTCAAATCTAAATTCCCAAATTTAAGTTTGGTTTTATAATATATTTGTTTTGAAATCACATTATTTATTATTTACATTTGCACACGTTCATGGTACTGGTTTATTTTTCAATACTTTATTTGTGTAAATATATACCCTTTATATTTTCTTTTAATATGACTAATATTTGAAAATAATTTCTAACATATAGAAAAAGAAAGGTAACGTATTAGTAAGAATGGTGAATGAACAATCCCATCCCTCCTTTTCTCTATAATAATAATAACAACAATAAGCTTATAATCCCCTAAAACAATAACAATTAAGAGTTGAATTATTATCATATACAGGGCTTTAACTTTAAGATATTAATAAATATCTAATCTTAAAGTGGGGACTTGTTTTAGAAAATAAAAAATAAAAACCAAAGTCTAAATCTTACTCTAATCTAGAATCTTTTTCGTGTTTATTTTCATTTGACCTCAATTTTTTTTTTTTATATTCTATTTTCTTATTCAAGTTTTAAATAACATAATTTAAAACGTAAAAGATTTTAAAGTCTAAGATATAATAAACAAATTTGGAACCTAATTAAATTGTTTGAACCTATGAAATGGGAGATATGTTAGCACATAATAATTGGAGATAAATAATGACGTCACTTTTAGATAAGCAATAATAATAAAATTGGACCTTCTTGGACAATTTTGCCCTTTGGACTTATCAATAATAGTGATGGACGAGGAGTTCAAATTTTACAATTCTCTTAG

mRNA sequence

ATGGGGAATACTATCGGGGGAAGAAAGAGAGTAAAGGTAATGAAAGTGGATGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCAGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAAGAAGAAGATTTATTTTCTTTTACAGTTGCCCAAAATCGCCGCCGATAATCGTCCCCCGCCCGATCGGATTCCGAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTTCCACCGCGACGACGGTGGACTCCTCTGCTCAGCCGCGCTTCCATAGTGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACAGCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGATAAGCAATAATAATAAAATTGGACCTTCTTGGACAATTTTGCCCTTTGGACTTATCAATAATAGTGATGGACGAGGAGTTCAAATTTTACAATTCTCTTAG

Coding sequence (CDS)

ATGGGGAATACTATCGGGGGAAGAAAGAGAGTAAAGGTAATGAAAGTGGATGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCAGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAAGAAGAAGATTTATTTTCTTTTACAGTTGCCCAAAATCGCCGCCGATAATCGTCCCCCGCCCGATCGGATTCCGAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTTCCACCGCGACGACGGTGGACTCCTCTGCTCAGCCGCGCTTCCATAGTGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACAGCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGATAAGCAATAATAATAAAATTGGACCTTCTTGGACAATTTTGCCCTTTGGACTTATCAATAATAGTGATGGACGAGGAGTTCAAATTTTACAATTCTCTTAG

Protein sequence

MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQQDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAITRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVNTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREISNNNKIGPSWTILPFGLINNSDGRGVQILQFS*

Homology

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BLAST of Chy9G162170 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37
Identity = 87/192 (45.31%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 1   MGNTIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGN+I   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++KPLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNKKKIYFLLQLPKIAADNR--PPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSE 120
            Q L  KK YFL++LPK+  +       +++P R   SG+H+ AK+RLD+LMLSRRT+S+
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 IAITRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGE-IAEKIIKMYL 180
           + I R             P    G   V++++PRSQ+ KLMEE+ ++   IAEKI+ +Y+
Sbjct: 121 VTIGRSDG-----GDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYM 180

Query: 181 KNEVNTGGGSAG 189
           +     GGG  G
Sbjct: 181 ERSGELGGGRGG 187

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BLAST of Chy9G162170 vs. ExPASy TrEMBL
Match: A0A5A7V9K2 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001150 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.0e-110
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNTIGGRKRVKVMKVDGEILK KLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNTIGGRKRVKVMKVDGEILKFKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKIAADNR PPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNKKKIYFLLQLPKIAADNRAPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPSSTA TVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKII MYLKNEV
Sbjct: 121 TRPSSTAATVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIINMYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREI 218
           NTGGGSAGDVNAGQQ EHWKPSLVSSVRENSKVHRE+
Sbjct: 181 NTGGGSAGDVNAGQQAEHWKPSLVSSVRENSKVHREV 217

[Close]

BLAST of Chy9G162170 vs. ExPASy TrEMBL
Match: A0A0A0KRN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418770 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.4e-109
Identity = 209/217 (96.31%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN+IGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLN+KKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPS+T+ T DSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV
Sbjct: 121 TRPSTTSAT-DSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREI 218
           NTGGGSAGDVNAGQ PEHWKPSLVSSVRENSKVHRE+
Sbjct: 181 NTGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREV 216

[Close]

BLAST of Chy9G162170 vs. ExPASy TrEMBL
Match: A0A5D3DSE2 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002680 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.7e-109
Identity = 209/217 (96.31%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNTIGGRKRVKVMKVDGEILK KLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNTIGGRKRVKVMKVDGEILKFKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKIAADNR PPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNKKKIYFLLQLPKIAADNRAPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPSSTA TVD SAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKII  YLKNEV
Sbjct: 121 TRPSSTAATVDFSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIINTYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREI 218
           NTGGGSAGDVNAGQQ EHWKPSLVSSVRENSKVHRE+
Sbjct: 181 NTGGGSAGDVNAGQQAEHWKPSLVSSVRENSKVHREV 217

[Close]

BLAST of Chy9G162170 vs. ExPASy TrEMBL
Match: A0A6J1JKD4 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111487701 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91
Identity = 186/224 (83.04%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN+IGGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKI   N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIT--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPS    T  SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEV
Sbjct: 121 TRPSPVLATA-SSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEV 180

Query: 181 NTGGG--------SAGDVNAGQQPEHWKPSLVSSVRENSKVHRE 217
           N+GGG         +G V+AG+ PE WKPSLVSSVRENSKVHRE
Sbjct: 181 NSGGGGGHGDAVAGSGGVDAGRHPEPWKPSLVSSVRENSKVHRE 221

[Close]

BLAST of Chy9G162170 vs. ExPASy TrEMBL
Match: A0A6J1GX06 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111458324 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.5e-90
Identity = 184/226 (81.42%), Postives = 197/226 (87.17%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN+IGGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKI+  N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIS--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPS       SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEV
Sbjct: 121 TRPSPVLAAA-SSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEV 180

Query: 181 NTGGG----------SAGDVNAGQQPEHWKPSLVSSVRENSKVHRE 217
           N+GGG           +G  +AG+ PE WKPSLVSSVRENSKVHRE
Sbjct: 181 NSGGGGGGGHGDAVAGSGGFDAGRHPEPWKPSLVSSVRENSKVHRE 223

[Close]

BLAST of Chy9G162170 vs. NCBI nr
Match: KAA0062351.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 413 bits (1061), Expect = 3.42e-144
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNTIGGRKRVKVMKVDGEILK KLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNTIGGRKRVKVMKVDGEILKFKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKIAADNR PPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNKKKIYFLLQLPKIAADNRAPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPSSTA TVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKII MYLKNEV
Sbjct: 121 TRPSSTAATVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIINMYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREI 217
           NTGGGSAGDVNAGQQ EHWKPSLVSSVRENSKVHRE+
Sbjct: 181 NTGGGSAGDVNAGQQAEHWKPSLVSSVRENSKVHREV 217

[Close]

BLAST of Chy9G162170 vs. NCBI nr
Match: XP_004140307.1 (uncharacterized protein At1g66480 [Cucumis sativus] >KAE8648427.1 hypothetical protein Csa_008184 [Cucumis sativus])

HSP 1 Score: 408 bits (1049), Expect = 2.30e-142
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN+IGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLN+KKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPS+T+ T DSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV
Sbjct: 121 TRPSTTSAT-DSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHRE 216
           NTGGGSAGDVNAGQ PEHWKPSLVSSVRENSKVHRE
Sbjct: 181 NTGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHRE 215

[Close]

BLAST of Chy9G162170 vs. NCBI nr
Match: TYK26626.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 408 bits (1049), Expect = 2.30e-142
Identity = 209/217 (96.31%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNTIGGRKRVKVMKVDGEILK KLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNTIGGRKRVKVMKVDGEILKFKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKIAADNR PPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNKKKIYFLLQLPKIAADNRAPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPSSTA TVD SAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKII  YLKNEV
Sbjct: 121 TRPSSTAATVDFSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIINTYLKNEV 180

Query: 181 NTGGGSAGDVNAGQQPEHWKPSLVSSVRENSKVHREI 217
           NTGGGSAGDVNAGQQ EHWKPSLVSSVRENSKVHRE+
Sbjct: 181 NTGGGSAGDVNAGQQAEHWKPSLVSSVRENSKVHREV 217

[Close]

BLAST of Chy9G162170 vs. NCBI nr
Match: XP_038876258.1 (uncharacterized protein At1g66480-like [Benincasa hispida])

HSP 1 Score: 380 bits (975), Expect = 6.35e-131
Identity = 199/222 (89.64%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNTIGGRKRVK+MKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNTIGGRKRVKIMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKI A+NRP PDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNKKKIYFLLQLPKITAENRPRPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPSS A   DSSAQPRF+SGPMQVKMKIPRSQVAKLMEES +EGEIAEKII MYLKNEV
Sbjct: 121 TRPSSAAA--DSSAQPRFNSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINMYLKNEV 180

Query: 181 NTGGGSAG------DVNAGQQPEHWKPSLVSSVRENSKVHRE 216
           NTGGG AG      +V+AG+QPE WKPSLVSSVRENSKVHRE
Sbjct: 181 NTGGGGAGAGDGDGNVDAGRQPEQWKPSLVSSVRENSKVHRE 220

[Close]

BLAST of Chy9G162170 vs. NCBI nr
Match: XP_022990967.1 (uncharacterized protein At1g66480-like [Cucurbita maxima])

HSP 1 Score: 351 bits (900), Expect = 1.34e-119
Identity = 186/224 (83.04%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN+IGGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNKKKIYFLLQLPKI   N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIT--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
           TRPS    T  SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEV
Sbjct: 121 TRPSPVLATA-SSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEV 180

Query: 181 NTGGGS--------AGDVNAGQQPEHWKPSLVSSVRENSKVHRE 216
           N+GGG         +G V+AG+ PE WKPSLVSSVRENSKVHRE
Sbjct: 181 NSGGGGGHGDAVAGSGGVDAGRHPEPWKPSLVSSVRENSKVHRE 221

[Close]

BLAST of Chy9G162170 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 87/192 (45.31%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 1   MGNTIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGN+I   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++KPLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNKKKIYFLLQLPKIAADNR--PPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSE 120
            Q L  KK YFL++LPK+  +       +++P R   SG+H+ AK+RLD+LMLSRRT+S+
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 IAITRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGE-IAEKIIKMYL 180
           + I R             P    G   V++++PRSQ+ KLMEE+ ++   IAEKI+ +Y+
Sbjct: 121 VTIGRSDG-----GDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYM 180

Query: 181 KNEVNTGGGSAG 189
           +     GGG  G
Sbjct: 181 ERSGELGGGRGG 187

[Close]

BLAST of Chy9G162170 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 151.4 bits (381), Expect = 9.8e-37
Identity = 80/179 (44.69%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN++GG+K  KVMK+DGE  KLK P+   EVLKD+P HVL++SE+VKHYG +AKPLE +
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           Q L  K++YF+++         P  +  PRRVR SG+H+SAK+RL+ LML+RR+ S+++I
Sbjct: 61  QRLEAKRLYFVVE---------PVKECPPRRVR-SGIHVSAKERLESLMLARRSSSDLSI 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNE 180
            +P    TT +     R      +VK++IP++++ KL++E A+E E  +KI  +++  +
Sbjct: 121 LKPPGGWTTEEEEGAVR------RVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQ 163

[Close]

BLAST of Chy9G162170 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 83/190 (43.68%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 1   MGNTIGGRK-RVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGNTI  R+ +VKVMK+DG+I +LK P+  S+  K+YP  VL++SE VK  GV+AKPLEP
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  QQDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIA 120
            Q L     YFL+ LP +   N+ P     RRV S  +H+ AK+RL++LMLSRRT+S++ 
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLP----YRRVMSGNIHVGAKERLEMLMLSRRTVSDVG 120

Query: 121 ITRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNE 180
             R        +         G  +V++++PRSQ+ KLMEES    E+A KII  Y+++ 
Sbjct: 121 AARSDVVGDGPE--------LGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESS 178

Query: 181 VNTGGGSAGD 190
               GG   D
Sbjct: 181 GGIQGGRDND 178

[Close]

BLAST of Chy9G162170 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31
Identity = 73/176 (41.48%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 1   MGNTIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGN++G +K   +M ++GE  KLK P+    V+KD+P HVL+ESEAVK  G++AKPLEP 
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QDLNKKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           Q+L  K+IYF+++LP      R   +R PRRVR SG+ MSAK+RL+ L LSRR+ S++++
Sbjct: 61  QNLESKRIYFMVELP------RTWKERTPRRVR-SGIQMSAKERLENLKLSRRSSSDLSV 120

Query: 121 TRPSSTATTVDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYL 177
            +  +     +             VK+K+P+ ++ KL +ES S  + + KI ++ L
Sbjct: 121 MKKKTEVNDEEREVS--------SVKLKLPKWKIEKLRKESESGSDFSNKITQLCL 161

The following BLAST results are available for this feature:

BLAST of Chy9G162170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLC8	1.5e-37	45.31	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of Chy9G162170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9K2	4.0e-110	97.24	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0KRN5	4.4e-109	96.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418770 PE=4 SV=1	[more]
A0A5D3DSE2	9.7e-109	96.31	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1JKD4	2.4e-91	83.04	uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC1114877...	[more]
A0A6J1GX06	4.5e-90	81.42	uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Chy9G162170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062351.1	3.42e-144	97.24	DUF4228 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_004140307.1	2.30e-142	96.76	uncharacterized protein At1g66480 [Cucumis sativus] >KAE8648427.1 hypothetical p...	[more]
TYK26626.1	2.30e-142	96.31	DUF4228 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038876258.1	6.35e-131	89.64	uncharacterized protein At1g66480-like [Benincasa hispida]	[more]
XP_022990967.1	1.34e-119	83.04	uncharacterized protein At1g66480-like [Cucurbita maxima]	[more]

BLAST of Chy9G162170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66480.1	1.0e-38	45.31	plastid movement impaired 2	[more]
AT2G01340.1	9.8e-37	44.69	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT5G37840.1	2.0e-34	43.68	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]
AT1G71015.1	3.6e-31	41.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..204 e-value: 4.9E-22 score: 79.2
None	No IPR available	PANTHER	PTHR33148:SF6	PLASTID MOVEMENT IMPAIRED PROTEIN	coord: 1..217
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G162170.1	Chy9G162170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane