Chy9G162050 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G162050
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	chrH09: 4748963 .. 4750548 (+)
RNA-Seq Expression	Chy9G162050
Synteny	Chy9G162050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCCGCTGCCCCATCCCGAGTTTTATTTGCTGAACAATTCACCGTCGGACTAGGCTTCTTCCTCCGTCGACCTAGGCGACCTCACGTACGACCTGCTCCATGTTCCTTCTCCTTTTCCCGCCAATTCATCGTCGTTCATTCGTTAAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGTAACATTTAGTCTCCAAAATTGTATTCATTTTGAGTTAAATTGGTTCCAGTTTTATGTGTTGATGAATATTGTGTTGGGAATGCTTTCAGATACTAGTGTTTTTGAAGTTAAACCAAATAAACAACAAAGGAAGTGAAGCTAAGTAGAGCACTAGAATGTTTTTGTTTTTCTGCTCTTACTCAGGACCTTTCCGTTGGACCCAACAGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATTTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAATCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTAAAGAACAACTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGCACTTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTACCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGTTGATATGCGAGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCTTGATACATCTAAAAGAATGTATATTACTTTTCCTAGGAAATACTCAAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGATTGAGAAGGAAAATATATTGTGTATAGGCAAGTATTTTGGTCTACGATCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACTTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCCCTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATCAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATCGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAGATGATGCACCTGGAGAACAGAATAAACCTGAATAA

mRNA sequence

ATGATAGCCGCTGCCCCATCCCGAGTTTTATTTGCTGAACAATTCACCGTCGGACTAGGCTTCTTCCTCCGTCGACCTAGGCGACCTCACGTACGACCTGCTCCATGTTCCTTCTCCTTTTCCCGCCAATTCATCGTCGTTCATTCGTTAAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGACCTTTCCGTTGGACCCAACAGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATTTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAATCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTAAAGAACAACTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGCACTTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTACCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGTTGATATGCGAGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCTTGATACATCTAAAAGAATGTATATTACTTTTCCTAGGAAATACTCAAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGATTGAGAAGGAAAATATATTGTGTATAGGCAAGTATTTTGGTCTACGATCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACTTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCCCTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATCAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATCGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAGATGATGCACCTGGAGAACAGAATAAACCTGAATAA

Coding sequence (CDS)

ATGATAGCCGCTGCCCCATCCCGAGTTTTATTTGCTGAACAATTCACCGTCGGACTAGGCTTCTTCCTCCGTCGACCTAGGCGACCTCACGTACGACCTGCTCCATGTTCCTTCTCCTTTTCCCGCCAATTCATCGTCGTTCATTCGTTAAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGACCTTTCCGTTGGACCCAACAGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATTTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAATCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTAAAGAACAACTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGCACTTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTACCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGTTGATATGCGAGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCTTGATACATCTAAAAGAATGTATATTACTTTTCCTAGGAAATACTCAAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGATTGAGAAGGAAAATATATTGTGTATAGGCAAGTATTTTGGTCTACGATCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACTTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCCCTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATCAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATCGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAGATGATGCACCTGGAGAACAGAATAAACCTGAATAA

Protein sequence

MIAAAPSRVLFAEQFTVGLGFFLRRPRRPHVRPAPCSFSFSRQFIVVHSLSRQSPPPQNFYSKSPSTSASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHIDTRQQKQEQKEESDDAPGEQNKPE*

Homology

[Close]

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.5e-51
Identity = 127/376 (33.78%), Postives = 204/376 (54.26%), Query Frame = 0


Query: 88  RTYVDGTINWVRDRGLDHA--VEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRI 147
           RTYVD  + W RD   D+   + R      V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 148 PMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLV 207
             +    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQTS       DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 208 KLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASG-SVDMRVL 267
           KL+++S+ +   +SI+  +KW LGLP DY++    +    F+ V  ++   G +VD    
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYN-- 201

Query: 268 ELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYI 327
                  +   SV++K A+K +        I FP   S G  +  K + W+ E+QKLPY+
Sbjct: 202 -----GGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYV 261

Query: 328 SPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLH 387
           SPY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ K+FGL  +  +A   
Sbjct: 262 SPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFER 321

Query: 388 HPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHIDT 447
           HP IFY+S K  T T +L+E Y+  + VE++P++ +R KY+ L+   E   K+       
Sbjct: 322 HPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGF 381

Query: 448 RQQKQEQKEESDDAPG 461
           R +    K+   D  G
Sbjct: 382 RDEGVVDKDLDLDFEG 387

[Close]

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.6e-31
Identity = 102/347 (29.39%), Postives = 171/347 (49.28%), Query Frame = 0


Query: 98  VRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPMR---PIDLIR 157
           VRD G D+ +E EK    V+     I S+P+ ++ +S++      L +  +   P   + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 158 KYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAAD---RLVKLLMLS 217
           K+P +FE      I   P  ++    L   A +Q+ ++      Q  D   RL KL+M+S
Sbjct: 107 KFPHVFE------IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 166

Query: 218 RVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNN 277
              +  +  +   + + GLP+D+  S++   P +F+++  +         + +E+V  + 
Sbjct: 167 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRD-----KYIEIVEKDP 226

Query: 278 ELATSVIEK---MAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYISPYE 337
            L+   IE+   +  + K   ++ +  +F   +  GF++ K F+  V +WQ+LPY SPYE
Sbjct: 227 NLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE 286

Query: 338 NASHLSPNSDES----DKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLH 397
           + S     S E+    +K +VA +HELL + V KKI  E I        L  + K  LL 
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 398 HPGIFYISSKAG---TYTVVLKEGYKRGSLVESNPLMNIRNKYLHLI 429
           H GIFYIS++      +TV L+EGYKRG LVE N +   R +   L+
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

[Close]

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.6e-30
Identity = 104/376 (27.66%), Postives = 180/376 (47.87%), Query Frame = 0


Query: 104 DHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPMRP--IDLIRKYPSIFE 163
           D  V+R+K    V+NI+  + S+P + + L  + + R  L +  R   I L+RKYP +FE
Sbjct: 85  DSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFE 144

Query: 164 EFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLV----KLLMLSRVHKAL 223
               G   ++   K+TS+       E+L       R +  D LV    KL+M+S   + L
Sbjct: 145 IVEEGAYSLR--FKMTSEA------ERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRIL 204

Query: 224 VSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNNELATSV 283
           +  I  LK DLGLP ++ ++I   +P YF+VV      +       LEL  W+ ELA S 
Sbjct: 205 LEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPA-------LELTHWDPELAVSA 264

Query: 284 IE--KMAVKVKLDTSKRMYITFPRKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENA 343
            E  +   + +    + + I  P K++      G  + K   + + +++ + YISPY++ 
Sbjct: 265 AELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 324

Query: 344 SHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHPGIFY 403
           SHL   + E +K    ++HELL +   K+   +++    + F    + +  L+ HP +FY
Sbjct: 325 SHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFY 384

Query: 404 ISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINT--------VEEDSKTTTKHI 459
           +S K    +V L+E Y+   L++ +PL  ++ K   L++           +D +     I
Sbjct: 385 VSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEI 444

[Close]

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.3e-30
Identity = 100/393 (25.45%), Postives = 188/393 (47.84%), Query Frame = 0


Query: 49  SLSRQSPPPQNFYSKSPSTSASGPFRWTQQQLHIFQ----IHLRTYVDGTINWVRDRGLD 108
           +L    PPP++ +       AS P       L + +      L       +   ++   D
Sbjct: 16  TLHHHPPPPKSLF-----LGASLPLLHPPPPLRLLRPGAPRRLAVVAQAAVKRRKEIPFD 75

Query: 109 HAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRI--PMRPIDLIRKYPSIFEE 168
           + ++R+K    V+ +++ + S P + + L  + + R  L +    R I L++++P +FE 
Sbjct: 76  NVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVFEV 135

Query: 169 FLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIID 228
              G   ++  +   ++ L LD      +  +     A  +L KLLM+S+  + L+  I 
Sbjct: 136 VEEGVYSLRFRLTPAAERLYLDE----LHLKNESEGLAVTKLRKLLMMSQDKRILIEKIA 195

Query: 229 QLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNNELATSVIE--K 288
            LK DLGLP ++ ++I   +P YF+VV   +   G      LEL  W+ ELA S  E  +
Sbjct: 196 HLKNDLGLPPEFRDTICLRYPQYFRVV-QMDRGPG------LELTHWDPELAVSAAEVAE 255

Query: 289 MAVKVKLDTSKRMYITFPRKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLSP 348
              + + +  + + I  P K++      G ++ +   + V +++++PYISPY + SHL  
Sbjct: 256 EENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRS 315

Query: 349 NSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHPGIFYISSKA 408
            S E +K    ++HE+L + + K+   +++    + F      +  L+ HP +FY+S K 
Sbjct: 316 GSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKG 375

Query: 409 GTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLI 429
              +V L+E YK   LVE + L+ ++ K   L+
Sbjct: 376 DRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392

[Close]

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-27
Identity = 93/378 (24.60%), Postives = 186/378 (49.21%), Query Frame = 0


Query: 99  RDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRI--PMRPIDLIRKY 158
           ++   D  ++R+K    V+ +++ + ++P + + L  + + R  L +    R I L+R++
Sbjct: 59  KEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRF 118

Query: 159 PSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKLLMLSRVHKA 218
           P +F+    G   ++  +   ++ L LD   +L  +  +    A  +L KLLM+S+  + 
Sbjct: 119 PGVFDVVEEGVYSLRFRLTPAAERLYLD---ELRLRNES-EGLAVAKLRKLLMMSQEKRI 178

Query: 219 LVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNNELATS 278
           L+  +  LK DLGLP ++ +++   +P YF+VV      +       LEL  W+ ELA S
Sbjct: 179 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPA-------LELTHWDPELAVS 238

Query: 279 VIE--KMAVKVKLDTSKRMYITFPRKYS-----NGFEMDKKFKKWVDEWQKLPYISPYEN 338
             E  +   + +    + + I  P K++      G ++ +   + +  ++++PYISPY +
Sbjct: 239 AAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYAD 298

Query: 339 ASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHPGIF 398
            SHL   SDE +K    ++HE+L + V K+   +++    + F      +  ++ HP +F
Sbjct: 299 FSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMF 358

Query: 399 YISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINT----------VEEDSKTTT 458
           Y+S K    +V L+E YK   LVE N L+ ++ K   L+              E+++   
Sbjct: 359 YVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMN 418

[Close]

BLAST of Chy9G162050 vs. ExPASy TrEMBL
Match: A0A0A0KRP2 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 5.1e-212
Identity = 377/399 (94.49%), Postives = 383/399 (95.99%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP R TQ QLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVPLSIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRLVKLLMLSRVHK  VSIIDQLKWDLGLPKDYVESIVPDFPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVGHQNFASGS DMRVLELVCWNNELATSVIEKMAVKVK D SK MYITFP KYSNGFEM
Sbjct: 187 VVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEESDDAPGEQNKPE 467
           +NTVEEDSKTTTKHIDTRQQKQEQKEES+ APGEQN+ E
Sbjct: 367 MNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAE 405

[Close]

BLAST of Chy9G162050 vs. ExPASy TrEMBL
Match: A0A5D3CKY8 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00040 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 5.5e-206
Identity = 367/403 (91.07%), Postives = 381/403 (94.54%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVGHQNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM+ITFP KYSNGFEM
Sbjct: 187 VVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 467
           +NTVEEDSKTT KHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. ExPASy TrEMBL
Match: A0A5A7UN72 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00040 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 5.5e-206
Identity = 367/403 (91.07%), Postives = 381/403 (94.54%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVGHQNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM+ITFP KYSNGFEM
Sbjct: 187 VVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 467
           +NTVEEDSKTT KHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. ExPASy TrEMBL
Match: A0A1S4DWI5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 4.7e-205
Identity = 367/403 (91.07%), Postives = 380/403 (94.29%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVG QNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM ITFP KYSNGFEM
Sbjct: 187 VVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 467
           +NTVEEDSKTTTKHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. ExPASy TrEMBL
Match: A0A1S4DXA3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 4.7e-205
Identity = 367/403 (91.07%), Postives = 380/403 (94.29%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVG QNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM ITFP KYSNGFEM
Sbjct: 187 VVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 467
           +NTVEEDSKTTTKHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. NCBI nr
Match: XP_031741647.1 (protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucumis sativus])

HSP 1 Score: 834 bits (2155), Expect = 2.11e-301
Identity = 419/444 (94.37%), Postives = 426/444 (95.95%), Query Frame = 0


Query: 23  LRRPRRPHVRPAPCSFSFSRQFIVVHSLSRQSPPPQNFYSKSPSTSASGPFRWTQQQLHI 82
           LRRP RPHVRPAP SFSFSRQF+VVHS SRQSPPPQNFYSKSPSTSASGP R TQ QLHI
Sbjct: 3   LRRPSRPHVRPAPSSFSFSRQFVVVHSFSRQSPPPQNFYSKSPSTSASGPLRRTQLQLHI 62

Query: 83  FQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREI 142
           FQIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEPSKSVPLSIITQKREI
Sbjct: 63  FQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREI 122

Query: 143 LRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAAD 202
           LRIP RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDA+EQLTYQTSTCRQQAAD
Sbjct: 123 LRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAAD 182

Query: 203 RLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMR 262
           RLVKLLMLSRVHK  VSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGS DMR
Sbjct: 183 RLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMR 242

Query: 263 VLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLP 322
           VLELVCWNNELATSVIEKMAVKVK D SK MYITFP KYSNGFEMDKKFKKWVDEWQKLP
Sbjct: 243 VLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLP 302

Query: 323 YISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRAL 382
           YISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILCIG+YFGLRSRFKRAL
Sbjct: 303 YISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRAL 362

Query: 383 LHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHI 442
           LHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL+NTVEEDSKTTTKHI
Sbjct: 363 LHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHI 422

Query: 443 DTRQQKQEQKEESDDAPGEQNKPE 466
           DTRQQKQEQKEES+ APGEQN+ E
Sbjct: 423 DTRQQKQEQKEESNHAPGEQNEAE 446

[Close]

BLAST of Chy9G162050 vs. NCBI nr
Match: KAE8648432.1 (hypothetical protein Csa_023661 [Cucumis sativus])

HSP 1 Score: 747 bits (1928), Expect = 1.40e-268
Identity = 377/399 (94.49%), Postives = 383/399 (95.99%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP R TQ QLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVPLSIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRLVKLLMLSRVHK  VSIIDQLKWDLGLPKDYVESIVPDFPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVGHQNFASGS DMRVLELVCWNNELATSVIEKMAVKVK D SK MYITFP KYSNGFEM
Sbjct: 187 VVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEESDDAPGEQNKPE 466
           +NTVEEDSKTTTKHIDTRQQKQEQKEES+ APGEQN+ E
Sbjct: 367 MNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAE 405

[Close]

BLAST of Chy9G162050 vs. NCBI nr
Match: XP_016900351.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3 [Cucumis melo])

HSP 1 Score: 724 bits (1868), Expect = 4.08e-258
Identity = 367/403 (91.07%), Postives = 380/403 (94.29%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVG QNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM ITFP KYSNGFEM
Sbjct: 187 VVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 466
           +NTVEEDSKTTTKHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. NCBI nr
Match: XP_016900350.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 724 bits (1868), Expect = 1.00e-257
Identity = 367/403 (91.07%), Postives = 380/403 (94.29%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVG QNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM ITFP KYSNGFEM
Sbjct: 187 VVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 466
           +NTVEEDSKTTTKHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. NCBI nr
Match: XP_008447137.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_008447138.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_016900349.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 724 bits (1868), Expect = 1.34e-257
Identity = 367/403 (91.07%), Postives = 380/403 (94.29%), Query Frame = 0


Query: 68  SASGPFRWTQQQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEP 127
           S SGP   TQQQLHI QIHLRTYVDGTINWVRDRGLDHAVEREKN LPVMNIKDFIKSEP
Sbjct: 7   SYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66

Query: 128 SKSVPLSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKE 187
           SKSVP+SIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVLELDA+E
Sbjct: 67  SKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVLELDAEE 126

Query: 188 QLTYQTSTCRQQAADRLVKLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 247
           QLTYQTSTCRQQAADRL+KLLMLSRVHK  VSIIDQLKWDLGLPKD+V+SIVP+FPDYFK
Sbjct: 127 QLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPEFPDYFK 186

Query: 248 VVGHQNFASGSVDMRVLELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEM 307
           VVG QNFASGS DMRVLELVCWNNELATSV+EKMA KVK DTSKRM ITFP KYSNGFEM
Sbjct: 187 VVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKYSNGFEM 246

Query: 308 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILC 367
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKK EKENILC
Sbjct: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306

Query: 368 IGKYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHL 427
           IG+YFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGS+VESNPLMNIRNKYLHL
Sbjct: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366

Query: 428 INTVEEDSKTTTKHIDTRQQKQEQKEE----SDDAPGEQNKPE 466
           +NTVEEDSKTTTKHI TRQQKQEQK+E    SDDA G QN+ E
Sbjct: 367 MNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAE 409

[Close]

BLAST of Chy9G162050 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 427.9 bits (1099), Expect = 1.0e-119
Identity = 213/376 (56.65%), Postives = 287/376 (76.33%), Query Frame = 0


Query: 91  VDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPMRPI 150
           V+ T  +VRDRGLDHAVEREKN  P+++IKD I+SEP+KSVP+S+IT +++ LR+P+RPI
Sbjct: 25  VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPI 84

Query: 151 DLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKLLML 210
           + IR +PS+F+EFLPGGIGI PH+ LT ++L  DA EQL Y + T +Q  ADRL+KLLM+
Sbjct: 85  EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMI 144

Query: 211 SRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQ-NFASGSVDMRVLELVCW 270
           +R++K  + I+D LKWDLGLPKDYVE++VP+FPDYF+V+  +    SG      LELVCW
Sbjct: 145 NRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGE-----LELVCW 204

Query: 271 NNELATSVIEKMAVKV-KLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYISPYE 330
           +NE A SV+EK A  + K + +K   I FP K+SNGF +DKK KKW+D+WQKLPYISPYE
Sbjct: 205 SNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYE 264

Query: 331 NASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHPGI 390
           NA HLS  SDESDKW  A+LHE++++ V+KK+EK+ IL +G++ GLRSRFKR L +HPGI
Sbjct: 265 NALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGI 324

Query: 391 FYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHIDTRQQK 450
           FY+SSK  T+TVVL++GYKRG L+ESN L+  RN+Y+ L+NTV++D+K  +       + 
Sbjct: 325 FYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKG 384

Query: 451 QEQKEESD-DAPGEQN 464
           + + E  D DA  E +
Sbjct: 385 KVEGEVCDTDAKAEND 395

[Close]

BLAST of Chy9G162050 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-74
Identity = 143/365 (39.18%), Postives = 225/365 (61.64%), Query Frame = 0


Query: 88  RTYVDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPM 147
           RT+V+  + WV D  LD AV+REKN   V+++KD I S PSKS+PLS ++  + ++ + +
Sbjct: 16  RTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHI 75

Query: 148 RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKL 207
                 +KYPS+F  F P       HV+LT + L L  +E+  + +   R     RL K 
Sbjct: 76  TAAAFFQKYPSVFTTFQPSP-SHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKF 135

Query: 208 LMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELV 267
           LML+      + ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   +  L + 
Sbjct: 136 LMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTL-ALTIS 195

Query: 268 CWNNELATSVIEKMAVKVKLDTSKR-MYITFPRKYSNGFEMDKKFKKWVDEWQKLPYISP 327
              N L  S +E+    +     K+ + I +   +  G+E+ K+ K WV++WQ LPYISP
Sbjct: 196 SRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISP 255

Query: 328 YENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHHP 387
           YENA HL   SD+++KW VA+LHELL +LV+KK E +N++C+G+Y G   RFK+AL+HHP
Sbjct: 256 YENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHP 315

Query: 388 GIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHIDTRQ 447
           GIFY+S K  T TVVL+E Y +  L+E +PLM IR++Y++L++      K    H   R 
Sbjct: 316 GIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKRDYVHGVERS 375

Query: 448 QKQEQ 452
            ++++
Sbjct: 376 NRKKR 378

[Close]

BLAST of Chy9G162050 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 216.1 bits (549), Expect = 6.1e-56
Identity = 127/344 (36.92%), Postives = 194/344 (56.40%), Query Frame = 0


Query: 91  VDGTINWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIP--MR 150
           V+  + WV+DR LD  V REK+   V N+   I + P   +P+  +   R  L +P  ++
Sbjct: 33  VNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELK 92

Query: 151 PIDLIRKYPSIFEEFL---PGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLV 210
               IR+YP+IF E       G  + P   LT + ++L  +E    + +   +    RL 
Sbjct: 93  LSAFIRRYPNIFVEHCYWDSAGTSV-PCFGLTRETIDLYYEEVDVSRVN--ERDVLVRLC 152

Query: 211 KLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLE 270
           KLLML+      +  ID L+WDLGLP DY +S++   PD F +V        S D+  L+
Sbjct: 153 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLV------KLSSDLDGLK 212

Query: 271 LVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYIS 330
           L+ W+  LA S   +M ++  +   +RM   FP K++ GF + +K  +W+ EWQ+LPY S
Sbjct: 213 LIHWDEHLAVS---QMQLREDVGNDERM--AFPVKFTRGFGLKRKSIEWLQEWQRLPYTS 272

Query: 331 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHH 390
           PY +ASHL P +D S+K  V + HELLH+ + KK E++N+  + K F L  +F +    H
Sbjct: 273 PYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERH 332

Query: 391 PGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLIN 430
           PGIFYIS K  T TV+L+E Y R  L+E +PL+ +R K+ +++N
Sbjct: 333 PGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMN 362

[Close]

BLAST of Chy9G162050 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 215.7 bits (548), Expect = 7.9e-56
Identity = 115/345 (33.33%), Postives = 191/345 (55.36%), Query Frame = 0


Query: 95  INWVRDRGLDHAVEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPMRPIDLIR 154
           + WV+++ LDH ++ E +      +KD IK  P+  +    +   +++L + +  +  +R
Sbjct: 33  LKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPVLRFLR 92

Query: 155 KYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLVKLLMLSRVH 214
           +YP++F EF        P  KLT   L LD++E++ +Q+        +RL ++LM+ R  
Sbjct: 93  RYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSH--EADTVERLCRVLMMMRSK 152

Query: 215 KALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSVDMRVLELVCWNNELA 274
              +  +  LK+DLGLP +Y +++V  +PD+F       F   S     L+LV W +E A
Sbjct: 153 TVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF------CFVKASNGNPCLKLVKWRDEFA 212

Query: 275 TSVIEKMAVKVKLDTSKRMY---------ITFPRKYSNGFEMDKKFKKWVDEWQKLPYIS 334
            S ++K      +   +  Y         +TFP  +  G+   KK K W+DE+QKLPYIS
Sbjct: 213 FSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYIS 272

Query: 335 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLHH 394
           PY++ S++ P SD  +K  VA+LHELL + + KK ++  +  +     +  +F R    +
Sbjct: 273 PYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRY 332

Query: 395 PGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINT 431
           PGIFY+S K  T TV+LKEGY+RG LV+ +PL  +R+K+ H++ T
Sbjct: 333 PGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRT 369

[Close]

BLAST of Chy9G162050 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 203.0 bits (515), Expect = 5.3e-52
Identity = 127/376 (33.78%), Postives = 204/376 (54.26%), Query Frame = 0


Query: 88  RTYVDGTINWVRDRGLDHA--VEREKNFLPVMNIKDFIKSEPSKSVPLSIITQKREILRI 147
           RTYVD  + W RD   D+   + R      V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 148 PMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAKEQLTYQTSTCRQQAADRLV 207
             +    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQTS       DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 208 KLLMLSRVHKALVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASG-SVDMRVL 267
           KL+++S+ +   +SI+  +KW LGLP DY++    +    F+ V  ++   G +VD    
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYN-- 201

Query: 268 ELVCWNNELATSVIEKMAVKVKLDTSKRMYITFPRKYSNGFEMDKKFKKWVDEWQKLPYI 327
                  +   SV++K A+K +        I FP   S G  +  K + W+ E+QKLPY+
Sbjct: 202 -----GGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYV 261

Query: 328 SPYENASHLSPNSDESDKWTVAILHELLHMLVTKKIEKENILCIGKYFGLRSRFKRALLH 387
           SPY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ K+FGL  +  +A   
Sbjct: 262 SPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFER 321

Query: 388 HPGIFYISSKAGTYTVVLKEGYKRGSLVESNPLMNIRNKYLHLINTVEEDSKTTTKHIDT 447
           HP IFY+S K  T T +L+E Y+  + VE++P++ +R KY+ L+   E   K+       
Sbjct: 322 HPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGF 381

Query: 448 RQQKQEQKEESDDAPG 461
           R +    K+   D  G
Sbjct: 382 RDEGVVDKDLDLDFEG 387

The following BLAST results are available for this feature:

BLAST of Chy9G162050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	7.5e-51	33.78	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
Q689D6	8.6e-31	29.39	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
A0MFS5	5.6e-30	27.66	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	7.3e-30	25.45	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	1.2e-27	24.60	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]

BLAST of Chy9G162050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRP2	5.1e-212	94.49	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 S...	[more]
A0A5D3CKY8	5.5e-206	91.07	Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7UN72	5.5e-206	91.07	Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S4DWI5	4.7e-205	91.07	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S4DXA3	4.7e-205	91.07	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Chy9G162050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741647.1	2.11e-301	94.37	protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucumis sativus]	[more]
KAE8648432.1	1.40e-268	94.49	hypothetical protein Csa_023661 [Cucumis sativus]	[more]
XP_016900351.1	4.08e-258	91.07	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3 [Cucumis melo]	[more]
XP_016900350.1	1.00e-257	91.07	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo]	[more]
XP_008447137.1	1.34e-257	91.07	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_008...	[more]

BLAST of Chy9G162050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71850.1	1.0e-119	56.65	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	1.7e-74	39.18	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	6.1e-56	36.92	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	7.9e-56	33.33	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G39120.1	5.3e-52	33.78	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 98..431 e-value: 3.4E-113 score: 377.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..466
None	No IPR available	PANTHER	PTHR31476:SF16	F14O23.23 PROTEIN	coord: 82..456
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 82..456

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G162050.1	Chy9G162050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding