Chy8G156450 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G156450
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	60S ribosomal protein L18, putative
Location	chrH08: 17515717 .. 17526690 (+)
RNA-Seq Expression	Chy8G156450
Synteny	Chy8G156450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAAAAAGTGAGCTTTCTCCCATTTCTATATTGCTCGTTGTTCAGCTATAATGTCATGTTTTGTTTGATGAGTGAGGAAAATGATTAATGGGTTTTGTTTTTTGGTGGGTTAAAATATGAGGACATGGTTTGATTTCTTCACTTGTTAACGTCTTTATTGGTTACTGGTTTCTGGATTTTGCTCCAATAGTGTCTTCTTTCTCGTTTTTATGATGGCGGGTTAGTTTTTGGGGCTCCGTCTGTTTGATTCTCTATATTGGAAAAATGAATTGTTCTACTTATATTTCTCGTTTGTTTCTTGGGGCTGCTATGGAACCATTGTGGCTGAATTTGAACATTTTAGGAATTAATACACATTTGATTTATGAATTGAAATGATCGTATGTTAATCTAATAAGAGTAAGGACTAGGAGGATGCTTACTTGTGAGTTCAGTGAGTGTCTTCACCATATCTTCTAGTGGTGTTGCCTGTACAAATCCTTAATTTTGTTCCTTTTTTTCATTGTGTTGCTGTCTTATTATTAGGTTTTCTACTGAAGATGTGTCTGCTCAGAACCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATAGCGGAAGAAGTAAGTATTGATCTAGCTTTTTGAATCTCACAATCATTTTAAGAGATAGAAACTGATATCTTTTTTCTTGTCTTTTTATTCCAGTACCCAGGACTAGAGCCAGTTTTGGATGATTTGCTTCCTAAAAAAGCTCCTCTGATTGTAACTAAGTGGTCAGAAATTCTTTTTGCTTCTATCCTTGCAAAAAACGATTGATATTAGATTTTATTTGCTTCTCGATCATATGGGGCTTATGTTGATTTTTTTACTACTCTTATAGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGGGATGGGCCGTACATGCCTACACTAAGGTTGCTTCATCAATGTAATGTTTTCTTTTTCTAGAAACTAGAAACTACACTTGATCATTTTTTTCTAATCCATAGAATATTCTTTATGACCCTGTTAACTTCAGTTGCGATACTTATCTTTGAATGTTTCAAATTTTAATTTGACTATAATATGGAAGGATACTAAGGTGCAAGTTTGCCATGATTTCTGGAATGGTGAAAGACGATCAATTTACTTGATCAATATCTATTATATTTTCTATAGTTTTGAAGCCTTTCCAACCCCTGCAGCTCATCTGCGAACTTTTAAGTCTTTTCTACACCATTATACAAAATTCTATGTATTCTTGTTTTAGCATAGCTCCATAGCTCATAGCAGTTATTGTTTTCTTAAATAGTCTTAATTGAATCATATGAATTACTTCTTCCGCTATGGAGATATGGTAAAACAGGGATATTCTATTCTTGTTTTACCATAGCTCCATAGACCCTCCAAGAGTTCTTTGGGAGGCGTTAGACTGAAGCCTATTCAAACTATGCTTCAAGAACTAAGAGGTAGGGAATTTTTGGACTTGGAGGGTCTCTCTACCTGCCCTTTAGAAGATATAATTTTGAATAAAAAACTGGTGCTACCAACAACCTTAAATTCACTTTCTCCATGTGTGTGAAACCTTAACAAGATTGCTTTCGGGAAGTGCCAATTCACTAGTGCTTATCAACAATCTTCGAAGGTTCCATGGTTAACTAATGGTTGTACTGATAATGCCATTTTTAAGGTTATGGAACATAATTTTTAGACTAATATAATCTTGAAGACCTAAAAATTTTGGTCTCAAGACAAATATTCTTGGAGAACAAATCTAGATTCACACATTCACTTCAGTTCTTCATCACTAACGGCTTAAGCAAATATTTGGTATTAAAATGCTTTTGCTCAATCACTCTCCTCCTCAAAGGTTGTCCAAGCCAACCAAAAAACTCCGTTCTAGCTATTGCCTTAATTAACAAGCCTTTTTGTTGTACTTCATCACTATATTCTTTCTGGAACCTAAGTTCCAGATTATGACTTGTATTGCCCATTTGGTTTGCAGATCCCAACATTATGAAAAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATAATGTGTCCTGGTCTTACATCCCCTGGGGGTGTCTTGGATGATGAAGTAGAAGCGGAAACACCCGTGGTAAACTTTTGTTCACTCTTATGTACTTAGTTTGTGATTTTTGGGTGATTATCACACTTGTTAGTAGGTCTTAAGGTTTTGTTTTGTGAATTCTTTCTTATATAAAATCAAACATTTTCAGGCAATAATGGCGGAAGGGAAGCAACATGCTCTTGCTATTGGCTTCACAAAGATGTCAGCAAAGGAAATGTGAGTATAATTGCCATTTAATTTTGATCACATCCCATTTGATGATGAATTTGTTTAGTTTATAATAATTAAGCTTTAATATTTAATACGTTCTCTTGTTTTGTTTAGTTTTTTTTTTTTTTTTTTTTTAAAGCCTTTTGGAAATCAGTCTTATTATCATTATTGCCAGTGAGGCTGTTATAAAAGCTTATAGATAGAAAGATAATTAACTAAGCTTTAATATTTGATATCAAACACCATGGAAGTTTTTTTTTTTTAATAAATAAAATATCATGTATGAAAAACCACTTTCATTGAGAAGAAGTGGTAGAATACAAGGGTAACAAAAAACCAACCCACAAAAAGGAGAGAACCCTCTATAAAAAGGAACTCCAACTATACAAAATAACAACTCTAGAATAGTTACAAAAAAGCCTTTGAATTTGAAACCCAAAGAGAAACAAGACAACGCACAAGGGACCAAATGTCACAAGGGTCCCCCTCCACACCCTTAAGAACTCTATTGTTCGACCCACCCCACACCACTTGCAAAATAGCACACCCTCTGCAAGTCAAAGAGATCGACACTTGCGGGTTGAGAAGGGTCTCCTGCAGCAATGCTCCCACATCTTTGTGACCCTTCTCACCAAGGAAGTGTTGAGAGCATTGAGGTTGAAACCTCACCTTTTGGATATTTTTTTTCTAAAAAAAAAATTGAGGGAAATACGAAATTTATTATTATTATTTACAAGAAATGAGATGGCTATAAAAAACCAAAAGAAGAAAAAACAGTGGAAGAGAACCGGCTCCCAAAAGAGCTACTTACAATAAGGCTTTGAAGGTAAGAGAACTAAAGAAAGTGTTAATTACAAAATGTATTATTGAAGCCATGACACCACCAAGAGCCATATAGTGTATTTGTCCCAGCAAAACAAAAAAGTCCTTCTGTTCCGTTCAAACCACATCTCCCCAAGTAAGAGGGTCTAGAACCAAAGTTCCATAAAAATCCTGGCCTTCTGTTCAGTCCTCAACGTGAAGACGCACACAAATGTTGGTATCAAATAAACCATAAAGCTTGAACCAGCATTGTTGTGCAAATTTGCAGTGTACAAAAATATGATGCACAGATTTAGCACTTGCTAAACTGAGGTGGCAAATGGAGGGAACTATCACATCTTTTATTTATAGTTATTTTGAAACTTGTTTTTCAGAGTATAAAGTGTATTGGTCACTTAACTTTTTCTTATTGACATAAACACAAAAGTCTCATTGACGTGGTGTTGATAAAGCTTAAGAAAATTACTCGTGTGTAATTTTACAGAAGGGCAACAAACAAAGGGATTGGAGTGGACAACATGCATTACCTTAACGATGGTCTTTGGAAGGTATGCTATAGTTCCCTCCCACGTTTCTTCATGCTCCCCAGTGTAGATGTTGAATGTCCAAGTTATATCTTATTTTGATTGCAGATGGAACGACTTGATTGAGGATGATATTCAAAAGAAACAACATTAGGGGGACAGGTTTGGGGGGACACAACTTAGACCCTAAACTTAGAGAACAAACTTTGTTTAATTATCTATACTTTGTGAGCTTCTCTGTTTTGTTGTGTGGACAGACGTGAACAGAAGAAGGGTAACAAGTCTCAATAGCCTGTTTGTACTCCATATTTTTATACTTTTTGAGGAATCAATTTCTCAATTGTACTTAAAATCCTTTTGCCCGTGGGCGTGAATCTGCTATCCATGCACTTCTTGAATAGTTAGGTGTTGTCTAAGCTCCAACCATCTCCGCATCTCTTATCTCATGTTGCACCCAAGTAATTTTCTATCATATTATTAGTTCTCGATTGCTGTTTTTTTTTATAAAGAGAAATAAGTATCTTTTATTAAATAGAAATGAGACCAAAGCTAGAATTATACAATGAACAATAGAACCTTAATAAAATGAGACCAAAGCTAGAATTATACAATGAGCAATAGAACCTAAAGAATACGAACAATAGAAGCGTTTATATAAAGTAAGTGTATAAGTGAAGTTCTTCGAATTGTTTTTAGATGTATTCTCAGGGGTGTGCGTGGGTGGTTGGAGTCTTTTTTTAACTTGAAAATATGAATTCAAATTTACATAGCAAATAGAAATATCAAACTACCTACGAAGAAGAGTGTCACAACGCAAGGTAGCATTTTAGCTTCATCATGCAAAACACAAGCATAGCACTGCGTTGAGAAAATAATTTTTTTTTCTTCTAATTTTGAAATATTGACAGTGAGATAACACTACATATTTTTATTTTCTTAAAAAATATAAACGAAGAAAATGATAATAGGGATCAAATTTCACTAAATTCTAATTATAAATGATATGAACTGAAATTCTAATTATAAATGATATGAACCAAAATAATTGTTTTAGAAAGATTTAGACAAAGAGCCTAATTTCACTAAGAATTTTCACAAATATCCTAAATTATAAATTATTTACTAAAATAGAATTTCGTATAAAATTTGGACAATAATAACCTTTTAATAATTATAAATTATATATTATATTCGTATTAAATTTTAGATTATTTCCTTATTAAAGATACTTTCAATTTATTGTCATATTAATTAATTCCTTATATAAGTGTGTCTTATTATTATGGAAATTATTTGAGTATATTTTGTAATGAAATATAATACAAAATATAATCTAATATAAAATATTATTGGAATTAATTTATCATAACCATGGTCTTTATTTCATCTTCATCACCAAACTCCATTGAATTTTCAATTGCCGCCGTCCACCTTTTATTTCCATAACCTCATCCTTTCAATTTTCCATAGATCTCCGACAATTGTTTATCTTCATTACGTTAACCTTTGATTAATAAACAAACATATAATTTTCTTCACTTTTTTCTTTATCCTTCAACATCCTTCACATTAACCTTACTATTTTTCGTAGATTTCGTTTCCTTCCGGTTAGTATTTGGTCGGACTTTTCTTTATTCCTTTTGTTCTCAGTCGACTTTCGGTTAGTAGAAATTTTCAATTATTTTCAATATTCTCCATTCCATACATTTCAAGAACACATATATACACATATTTTACAGTATGTTTTCCGTCACTTTTCTATTCTAAATTATCATTATCATACTGTATACTACATAATTACAACACAACGGTAATTTACTATATACCCGTAAGGTATCATCGTTTTTTGACATGATTTATTAAATATATACCACATATTATTTACAATTATACTAATTTTTTAATAATCCCGCAAATCAGAATAGGTTATATATTTCATTTATTATATATATACCACATCTAACTTTCTATTATTATAGTTATTTAATTTACCAGTATGATGTTATATTATATATATACTACATCTTATTGACAATTATATTATTTAATAACTTATACATGTAATATTTTTTAAACAGGATGATCACTATTGCAGTGTACTTCGATGGTTTTTTCAACGGAACTAACAATTACGTTTGTTTTAGTGTGTCTGAAATGTAGTTGATGAACATATGTCATATTAAATCCAAGTTAGGTAGTTTTTTTATATGAACAACTTTGCTATATATATTTGCTTAGGTCCTATAGAATGTCTTAAGAAAGATATGACAATAAAGAATGACAAGGATGTTAAATGGATTTACCATATAATAACATCTAGTTGAACAACATATTGCTCTTATTGTTCATTGTTTTTGCTTTTTAGCTATTTCTTTGGGTTCATCGTCCTCAAGTTCATTTCAAACACAAATCCTTCTTGATTCTTTTTCCTTTCCTTTACTCTACTTATCTTTGAACAAACTCTTTCTTGCAATAGGTATATTGTCCGGCACAATAAGATATACCTATAACCTTATAATTTTTTTTCAAGTATATTAAATAATTTTTTTAATACAAAACATAATTATACCTCATCAAACTCTGACATATAGTTGGGATGTACGTCAGAAGTTCCATCTCCCTCATTGATCTTTAGAACAATGTAATATAACCATTAGTTCACATCTTATTATATATCTAATATACTCACATTTGAATCGTCTTGTAGTTCATGCATATGCATTTTGTTTTCAGGCGTTTCAAATACTACATCAGGTTTCACATGTTTTCGTTTTTCGTATAGTACAATTTGTGTTCCTGTTGGTCCTCCCAAATCGTATTCATCCTCTCCAGGATATACTGCTTGAATTGGTTCAAAATCCATTTGGTTATGTTCATATATCTCTTCATCCTACGACATATATACATATTATATATTGTTAAACGACTGTTACCAAATATATAATATACCCTTATAAAATTATAGCACAAAACTCCACAACATACCTCACTATCGTCTATCTTTATTGGTTCATCCTTGTTAGATTTCATATGTTTCTTCCTCGAGCCATTACTTCTTTCACTCCTTTGCACCATTTTCTATTAACTGCATATATAGATGTTTATACAATATATACTACAAATTACAATAAATTGCCGTTTTCATTCCGAACATACCCAATGAACCTAATGGCAAAAAAAAAAACATAATTTCATTCGTAGACTATTCGTTTTTATAACATACATTCTCGATAAACACTAGAATATGTCACAAGCAGGAGTACATTTTCGATTTTGGTCCACGAATCAAACATCTAAAATATACCGCTTTCAATCCTTCAGTTTCAAAATATCAAAATGTCACGGCCATCAAAAGTTATTTTATTCAAGCTTGAAATCTCAAAAACCCTAGAACCTACCGCTTTCAATCCTTCAGTTTCGTTTTTGTTCATATTTAATCGAATATCTTCAATATACCTAAAATACACAATGTACTAACCTCGAAATTTCTTCACAGTTTCTGTAAAAAAAAAAATTAAACAAGTCGCTTGTCGTCCAGTTTCTTCTTCGTCAATATCGAAAGCTCTGTAATTTCTCCATTTCGTATTAGTCTTCGGTGCGTATAATGGAGGTAGTTTTTGTATATGGAAAGTAATAAGACCTTTCCTCTACTATCCAAAACGGTCTTACCCACGTTTGACACTTTTTTTTTTTTTATAATATAAATTTATTAAATAATATACAATGGGCAAAAATGAAATTTGTGCCCTATATTTATGAAATATATTGGCCCATTTACAACTTTTGTAAATTTTTTTTAACAATTTGGATCTTTCTTGTAATATCATATACCAATTTAGGTTACCAATGTTTTAAGATACGATATCACAATTTTGTTAAAATTTTAAGTGGGCCGGCCCGATCCAACTCACAAAATGGGAAAGAGCGATCCAACACTATAAAAGGGGTTTTGAAAACCCTGATTCTTACTCCCCTCCTTCTTCCACACCGGCGGCGCCTGTTGATACTCGGAGAGCATTTGTAATGGTACCTTCATCATACTCTCTTCTCTCTGCAGCTTTGCTGGGTTATATGTTTTGTTTTTGTATCTGACTTCTTCCGGTGATTAGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCACCTAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGGTGCTTGTTAACCGATATTTCTCCTTCATTTTTTTGCTTTGTTTGAACTTAAATGTGCTTGATTGTTTAAGGGGTTTGTTCGAATGTCTGTGAGTCTCCCATTGAAAACCAATTTTGAGATGTCTATTGGTTGGTTTATTGGATTTCTGAAAATTACAGCTTTTGTTTTATTCTCTCTGCTTTGTGCTTGTAAAATCTGTTTTAAATTGCTAACAGTTTATAAATGTGTAATTTTTGTTATTTTTTTTTTCTGACTAATTGGTTTTGATGGCTGGTCTTTCTGCTTTGATGATGTTTAATAATCCCAGCTCGATGAGACCTTTTGTAGGTCGGGGAATAATCTTTACCCATTAAATATCTGAGCCTTAAGTCCAGTTTTAAAGATTTTTTTATTGTTTCCCACTGCTGATGTAAATGATGGATTTTACTGTGAAGTATCCAATTGTTAGTCCGCTCGTTAACTGCATTTTCTCTTCTGGTCTTTCTGCTTTGATGATATTTGTATAATCCCAGCTCTATGAGACCTTTTGTAGGTCGGGGAATAATCTTTACCCATAAAATATCTGAGCCTAAAGTTCGGTTTTTGAGTCTTTTTGGAATTGTTTTCCGCTTTTCTCTGCGTTGTTCTTGCCAAATTCATTTTAAATTTGTAGCTTATAAATGACTAATTTTTGTTTCTTTTGTCTAACTAATTCGTTTTGATGGCTTTTCTTTCTGCTTTGAGGATGTTTGATAATCCCAGCTCGATGAGACCTTTTGTAGGTCAGGGAATAGTCTTTACCCATTAAATATCTGAGCATAAAGTCCAGTATCAGATTTTTTTTGGATTGTTTTCCACTTAGCTTCATTGTGCCTGTTATTTCTTTTTTAAACCGGTAGGTTTATAAATACCTATTTTTAATTTTTTTAATTTTTCACTAACTAATTGGTTTTGATGGCTGGTCTTTCTGCTTTGATGATGTATGATAATCCCAGCTCGATGAGACCTTTCGTAGGTCGGGGAATAGTATTTACCCATCAAGTATCTGAGCCTAAAGTCCAGTTTTAGATTTTTGTTTGGATGGTTTTCCACTTCTCTCTGCATTGCGCTTGTGAAATCTGTTTTAAACCGGTAGTAGTTTGTAAATGCCTAATTTTGGTTCTTTTTTGTTAACTAATTGGTTTTGATGGCTGGTTTTTCTGCTTTGATGATGTTTGATAATCCCAGCTCGATGAGACCTTTTGTAGGTCGGGGAATAGACTTTACCCATCAAGTATCTGAGCTTAAAGTCCAGCTTTAGAGTCTTTTTTGGATTGTTTTTCACTTCTCTGTGTTTTGCCTGTTAAATCTGTTTTAAATTGCTAACAGTCTACATTTGCGTTTTTTCCCCTCTAACTAATTAGTTTTGATGGCTGGTCTTTCTGCTATGATAATATTTGATAACGGGGAATTATTGTAAATGACAAAACTATTGAAAATATTTATAAAATATACCTGGTTTATTGTTGTTAGATACTGATCGAAGTTTGTTAGAAGTCTATCTATCATTGATATTATTATGAATTTTTTTGCTATATTTGGTAGATACTTTGGTTCATTATGTTATATTTGAAAATGCTCCTTTGATAATCTCAGCTCGATGAGACCTTTTGTAAGTTGGGAATTGTCTTCACCCATAAAATTTCTGAGCCTAAATAAAATGCTGTGCTATCTACATTATTTCCCCTTTTTGAGTAGGGAATATAGTTATACCTCAACAGGCATAAGCCATAAAAGGCTTTTTTTAGTCTTTGAACAGAAAAAGGTTCCCAGTGATGATTGACTTGACCATGCTAATGCTGATCAATTTGTGATTATTCTCTTCTTTAATTTTTCTGAGGGAACTGGCTCCAAGGTTTTAAGTTTTTGTGCTCATTGGCATGTCATGCTCCTGAGTGTGGTTCTATTGTCAGAGAGGAGAATGATTGATTTACTCTAATTTTTTTATTCATTTTTTGAAAGTATAAATACTTGCATGAAGATTAATATATTCCCCCACTGATATGAACTATTCATATGGATTTGATATTTGTCTTCGAAAACTTAAATCTTACACTTTTTAGTTTTCAGATCCAGGAGTCTTCTAATTTTTTTCATTTGTGTCAATACGGTTATAAACTTTGTGTGTATGTAGGTTATTCTACTCATGCTATGAATAGAAGCTTTATTTCACGTCCATTTACTTGAATAAAGTTGTTCTGTTTGGCTTCTTACACGCTGTTTCACCTGGCTTGCATTCACTAATACAATGATTTCATGTATTTCTTATCAGCTTTACCGCTTCCTTGTCCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTTAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACGAAAGGAAAGGTTGGTCAAATCGTGTAGTATTCTAGTTTTGTTTTCTTTTTTTTTTTGTATGGTTGTGTATATATGAGATATCTGAAACCTTAAACATTCGTGTGTTATGTAATAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGAGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTATGTATATCTTCATTTCTTTTCAGAATTTGCTGGATGAATCTTTCATGTTGAAGTCATTACTTAGTTCATTTCCATTCTTAACGTGCTTCTTCACATTGGTCAAGATTGAACGCATTAAAGAGTTTCAACAATGATTTAGTAATTATTTAGAGTTTCAAACAATGATTTAGTAGTTATTTTAGGGGTTTGAATCATCACTCGGCTTCATTTGCAGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA

mRNA sequence

ATGTTCAAAAAGTTTTCTACTGAAGATGTGTCTGCTCAGAACCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATAGCGGAAGAATACCCAGGACTAGAGCCAGTTTTGGATGATTTGCTTCCTAAAAAAGCTCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGGGATGGGCCGTACATGCCTACACTAAGGTTGCTTCATCAATATCCCAACATTATGAAAAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATAATGTGTCCTGGTCTTACATCCCCTGGGGGTGTCTTGGATGATGAAGTAGAAGCGGAAACACCCGTGGCAATAATGGCGGAAGGGAAGCAACATGCTCTTGCTATTGGCTTCACAAAGATGTCAGCAAAGGAAATAAGGGCAACAAACAAAGGGATTGGAGTGGACAACATGCATTACCTTAACGATGGTCTTTGGAAGTGGGCCGGCCCGATCCAACTCACAAAATGGGAAAGAGCGATCCAACACTATAAAAGGGGTTTTGAAAACCCTGATTCTTACTCCCCTCCTTCTTCCACACCGGCGGCGCCTGTTGATACTCGGAGAGCATTTGTAATGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCACCTAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTCCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTTAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGAGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA

Coding sequence (CDS)

ATGTTCAAAAAGTTTTCTACTGAAGATGTGTCTGCTCAGAACCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATAGCGGAAGAATACCCAGGACTAGAGCCAGTTTTGGATGATTTGCTTCCTAAAAAAGCTCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGGGATGGGCCGTACATGCCTACACTAAGGTTGCTTCATCAATATCCCAACATTATGAAAAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATAATGTGTCCTGGTCTTACATCCCCTGGGGGTGTCTTGGATGATGAAGTAGAAGCGGAAACACCCGTGGCAATAATGGCGGAAGGGAAGCAACATGCTCTTGCTATTGGCTTCACAAAGATGTCAGCAAAGGAAATAAGGGCAACAAACAAAGGGATTGGAGTGGACAACATGCATTACCTTAACGATGGTCTTTGGAAGTGGGCCGGCCCGATCCAACTCACAAAATGGGAAAGAGCGATCCAACACTATAAAAGGGGTTTTGAAAACCCTGATTCTTACTCCCCTCCTTCTTCCACACCGGCGGCGCCTGTTGATACTCGGAGAGCATTTGTAATGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCACCTAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTCCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTTAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGAGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA

Protein sequence

MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQLTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV*

Homology

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BLAST of Chy8G156450 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 324.7 bits (831), Expect = 1.5e-87
Identity = 162/187 (86.63%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MGIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 282 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 341
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 342 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 401
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 402 NSRGYRV 409
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Chy8G156450 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 4.3e-87
Identity = 161/187 (86.10%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MGIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 282 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 341
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 342 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 401
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 402 NSRGYRV 409
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Chy8G156450 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.6e-81
Identity = 153/184 (83.15%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 225 DLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLS 284
           DL AGGK+KKTKR +PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 285 LSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFD 344
           LSRLI++ +GKE KI VVVG +TDDIRVY+VP +KV AL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 345 QLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSR 404
           QLALR PL  +TVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 405 GYRV 409
           G+RV
Sbjct: 181 GFRV 183

[Close]

BLAST of Chy8G156450 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 285.8 bits (730), Expect = 7.7e-76
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MGIDL+AGGKSKKTKR  PKSDD+YLKLLVK  R+LVRRT S FNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 282 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 341
           PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 342 TFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGK 401
           TFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 402 RNSRGYRV 409
           R SRG++V
Sbjct: 181 RRSRGFKV 188

[Close]

BLAST of Chy8G156450 vs. ExPASy Swiss-Prot
Match: P12001 (60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2)

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-63
Identity = 126/188 (67.02%), Postives = 150/188 (79.79%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MG+D +   K +K +R  PKS DIYL+LLVKLYRFL RRT S FN V+LKRLFMS+ N+P
Sbjct: 1   MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 60

Query: 282 PLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGE 341
           PLSLSR+I+  K  G+E+K AVVVGTITDD+R+ EVP LKV ALR +  AR+RI KAGG+
Sbjct: 61  PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 120

Query: 342 CLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARG 401
            LTFDQLAL +P G+ TVLL GP+  RE  +HFG APG PHSH+KPYVRSKGRKFERARG
Sbjct: 121 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 180

Query: 402 KRNSRGYR 408
           +R SRGY+
Sbjct: 181 RRASRGYK 187

[Close]

BLAST of Chy8G156450 vs. ExPASy TrEMBL
Match: B9RFD6 (60S ribosomal protein L18, putative OS=Ricinus communis OX=3988 GN=RCOM_1433890 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 4.4e-183
Identity = 339/409 (82.89%), Postives = 361/409 (88.26%), Query Frame = 0


Query: 4   KFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVV 63
           KFS+++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDDLLPKK+PLIV KCQNHLNLV+V
Sbjct: 10  KFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVMV 69

Query: 64  NNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLD 123
           N+VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG LD
Sbjct: 70  NSVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALD 129

Query: 124 DEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQL 183
           +EVEAETPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK    I  
Sbjct: 130 EEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKKNPAI-- 189

Query: 184 TKWERAIQHYKRGFENPDSYS----PPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVA 243
                         +NP SY+    PP         +RRA  MGIDL AGGKSKKTKR A
Sbjct: 190 -----------NSLQNP-SYTFVPFPPLQQQQQQPTSRRA-SMGIDLKAGGKSKKTKRTA 249

Query: 244 PKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKI 303
           PKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI F KGKESK 
Sbjct: 250 PKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKAPLSLSRLITFMKGKESKT 309

Query: 304 AVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLL 363
           AVVVGT+TDDIRVYEVPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLL
Sbjct: 310 AVVVGTVTDDIRVYEVPALKVTALKFTETARARIEKAGGECLTFDQLAMRAPLGQNTVLL 369

Query: 364 RGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 409
           RGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Sbjct: 370 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 403

[Close]

BLAST of Chy8G156450 vs. ExPASy TrEMBL
Match: A0A6N2KBM1 (PUA domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS63739 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.7e-183
Identity = 335/416 (80.53%), Postives = 360/416 (86.54%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKFS+++VS+QNQVKASVQRKIRQSIA+EYPGLE  LDDLLPKK+PLIV KCQNHLN+
Sbjct: 1   MFKKFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEAALDDLLPKKSPLIVVKCQNHLNM 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           VVVNNVPLFFNIRDGPYMPTLRLLHQYP+IMKKLQVDRGAIKFVLAGANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPSIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK---- 180
            LDDEV+AETPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK    
Sbjct: 121 ALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKLIKN 180

Query: 181 ----WAGPIQLTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKS 240
               +  P+QL                     P ++  A      +A  MGIDL AGGKS
Sbjct: 181 PNFIFCSPLQL---------------------PAAAPLAVAAGIVKASTMGIDLKAGGKS 240

Query: 241 KKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFT 300
           KKTKR APKSDDIYLKLLVKLYRFLVRRT S FNAVILKRLFMSK+NK PLSLSRLI +T
Sbjct: 241 KKTKRTAPKSDDIYLKLLVKLYRFLVRRTQSKFNAVILKRLFMSKINKAPLSLSRLITYT 300

Query: 301 KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 360
           KGKE KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPL
Sbjct: 301 KGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 360

Query: 361 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 409
           GQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKRNS+G+RV
Sbjct: 361 GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSKGFRV 395

[Close]

BLAST of Chy8G156450 vs. ExPASy TrEMBL
Match: A0A218WIU0 (PUA domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018348 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 5.4e-181
Identity = 333/406 (82.02%), Postives = 349/406 (85.96%), Query Frame = 0


Query: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62
           K+FS EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVL+DLLPKK+PLIV KCQNHLNLV+
Sbjct: 264 KRFSYEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHLNLVL 323

Query: 63  VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVL 122
           VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG L
Sbjct: 324 VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGAL 383

Query: 123 DDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQ 182
           DD+VE+ETPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWK      
Sbjct: 384 DDKVESETPVAIMAEGKQHALAIGFTKMSAKDIRAVNKGIGVDNMHYLNDGLWK------ 443

Query: 183 LTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAPKS 242
                                                   GIDL AGGKSKKT+R APKS
Sbjct: 444 ----------------------------------------GIDLKAGGKSKKTRRTAPKS 503

Query: 243 DDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVV 302
           DDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKPPLSLSRLI++  GK+ KIAVV
Sbjct: 504 DDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIRYMSGKDDKIAVV 563

Query: 303 VGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 362
           VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP
Sbjct: 564 VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 623

Query: 363 KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 409
           KN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Sbjct: 624 KNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 623

[Close]

BLAST of Chy8G156450 vs. ExPASy TrEMBL
Match: A0A328E3X4 (PUA domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_007415 PE=3 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.7e-177
Identity = 323/407 (79.36%), Postives = 345/407 (84.77%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKF  E+VS QNQVKASVQRKIRQSIAEEYPGLE VLDDLLPKK+PLIV KC NHLNL
Sbjct: 1   MFKKFCNEEVSGQNQVKASVQRKIRQSIAEEYPGLEHVLDDLLPKKSPLIVAKCPNHLNL 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGP 180
           VLD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK    
Sbjct: 121 VLDEEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWK---- 180

Query: 181 IQLTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAP 240
                                                     GIDL AGGKSK+TKR AP
Sbjct: 181 ------------------------------------------GIDLKAGGKSKQTKRTAP 240

Query: 241 KSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIA 300
           KS+D+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK N+PPLSLSRLI F  GKE KIA
Sbjct: 241 KSEDVYLKLLVKLYRFLVRRTGSKFNAVVLKRLFMSKTNRPPLSLSRLIAFMSGKEDKIA 300

Query: 301 VVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLR 360
           V+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKAGGECLTFDQLALRAPLGQNT+LLR
Sbjct: 301 VLVGTITDDVRVYEVPAMKVCALRFTQTARARIEKAGGECLTFDQLALRAPLGQNTILLR 360

Query: 361 GPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYR 408
           GPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+RNSRGY+
Sbjct: 361 GPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGYK 361

[Close]

BLAST of Chy8G156450 vs. ExPASy TrEMBL
Match: A0A5N5MMN8 (PUA domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_007107 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.0e-176
Identity = 325/405 (80.25%), Postives = 344/405 (84.94%), Query Frame = 0


Query: 4    KFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVV 63
            KFS ++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDD LPKK+PLIV KCQNHLNLVVV
Sbjct: 731  KFSNDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDFLPKKSPLIVVKCQNHLNLVVV 790

Query: 64   NNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLD 123
            NNVPLFFNIRDGPYMPTLRLLHQYP+IMKKLQVDRGAIKFVLAGANIMCPGLTS GG LD
Sbjct: 791  NNVPLFFNIRDGPYMPTLRLLHQYPDIMKKLQVDRGAIKFVLAGANIMCPGLTSAGGALD 850

Query: 124  DEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQL 183
            DEV+AETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK       
Sbjct: 851  DEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWK------- 910

Query: 184  TKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAPKSD 243
                                                   GIDL  GGKSKKTKR APKSD
Sbjct: 911  ---------------------------------------GIDLKRGGKSKKTKRTAPKSD 970

Query: 244  DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVVV 303
            DIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI F KGKE+K AV+V
Sbjct: 971  DIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKAPLSLSRLITFMKGKENKTAVLV 1030

Query: 304  GTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPK 363
            GT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPK
Sbjct: 1031 GTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPK 1089

Query: 364  NSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 409
            NSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKRNS+G+RV
Sbjct: 1091 NSREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSKGFRV 1089

[Close]

BLAST of Chy8G156450 vs. NCBI nr
Match: XP_034707149.1 (uncharacterized protein LOC117930626 [Vitis riparia])

HSP 1 Score: 651 bits (1679), Expect = 4.04e-232
Identity = 347/456 (76.10%), Postives = 374/456 (82.02%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKFS+EDVS+QNQVKASVQRKIRQSIA+EYPGLEPVLDDLLPKK+PLIV KCQNHLNL
Sbjct: 1   MFKKFSSEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNL 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           V+VNNVPLFFN+RDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG
Sbjct: 61  VLVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK-WA- 180
           VLDD V  E+PVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWK WA 
Sbjct: 121 VLDDNVAEESPVAIMAEGKQHALAIGFTKMSAKDIRAINKGIGVDNMHYLNDGLWKIWAQ 180

Query: 181 -----------------------------------GPIQLTKWERAIQH------YKRGF 240
                                              GP+Q+   +R          Y++  
Sbjct: 181 TLISGNGWSAWIEAAVAGGTAFIDDLQFSPWVALNGPMQIPSPQRHSTDLRSEFTYQKPL 240

Query: 241 ENP-----DSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAPKSDDIYLKLLVK 300
           +NP     +    P+S  ++ +  +    MGIDLVAGGKSKKTKR APKSDDIYLKLLVK
Sbjct: 241 KNPSFICLEGRRNPNSHLSSGLQLQ-LLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVK 300

Query: 301 LYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRV 360
           LYRFLVRRTGS FNAVILKRLFMSKVNKPPLSLSRL+++  GKE KIAVVVGT+TDDIRV
Sbjct: 301 LYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLVRYMGGKEGKIAVVVGTVTDDIRV 360

Query: 361 YEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHF 408
           YEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHF
Sbjct: 361 YEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHF 420

[Close]

BLAST of Chy8G156450 vs. NCBI nr
Match: EEF49907.1 (60S ribosomal protein L18, putative [Ricinus communis])

HSP 1 Score: 648 bits (1672), Expect = 6.95e-232
Identity = 339/409 (82.89%), Postives = 361/409 (88.26%), Query Frame = 0


Query: 4   KFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVV 63
           KFS+++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDDLLPKK+PLIV KCQNHLNLV+V
Sbjct: 10  KFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVMV 69

Query: 64  NNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLD 123
           N+VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG LD
Sbjct: 70  NSVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALD 129

Query: 124 DEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQL 183
           +EVEAETPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK    I  
Sbjct: 130 EEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKKNPAIN- 189

Query: 184 TKWERAIQHYKRGFENPDSYS----PPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVA 243
                         +NP SY+    PP         +RRA  MGIDL AGGKSKKTKR A
Sbjct: 190 ------------SLQNP-SYTFVPFPPLQQQQQQPTSRRAS-MGIDLKAGGKSKKTKRTA 249

Query: 244 PKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKI 303
           PKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK+NK PLSLSRLI F KGKESK 
Sbjct: 250 PKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKAPLSLSRLITFMKGKESKT 309

Query: 304 AVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLL 363
           AVVVGT+TDDIRVYEVPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLL
Sbjct: 310 AVVVGTVTDDIRVYEVPALKVTALKFTETARARIEKAGGECLTFDQLAMRAPLGQNTVLL 369

Query: 364 RGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 408
           RGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Sbjct: 370 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 403

[Close]

BLAST of Chy8G156450 vs. NCBI nr
Match: XP_031101783.1 (uncharacterized protein LOC116005680 [Ipomoea triloba])

HSP 1 Score: 644 bits (1661), Expect = 9.20e-230
Identity = 337/431 (78.19%), Postives = 364/431 (84.45%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKFS+E+VS QNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKK+PLIV KC NHLNL
Sbjct: 1   MFKKFSSEEVSGQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKSPLIVAKCPNHLNL 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIK+VL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKYVLSGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGP 180
            LD EV AETPVAIMAEGKQHALAIGFTKMSAK+I+A NKGIGVDNMHYLNDGLWK    
Sbjct: 121 ALDVEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERS 180

Query: 181 IQLTKWE-------RAIQHYKRGFEN---------PDSYSP------PSSTPAAPVDT-R 240
           +  T+         R +      + +         P+ Y         ++ P  P +  +
Sbjct: 181 VDGTRVRCGSKVHVRKVNLINTAYASIILSKNPRIPECYQNIAGLILSAARPLRPPEPFQ 240

Query: 241 RAFVMGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSK 300
           R+  MGIDL AGGKSK+TKR APKSDD+YLKLLVKLYRFLVRRTGS FNAVILKRLFMSK
Sbjct: 241 RSSTMGIDLKAGGKSKQTKRTAPKSDDVYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSK 300

Query: 301 VNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAG 360
            NKPP+SLSRLI F  GKE KIAV+VGTITDD+R YEVPALKV ALRFT+TARARIEKAG
Sbjct: 301 TNKPPVSLSRLITFMSGKEDKIAVLVGTITDDVRAYEVPALKVCALRFTKTARARIEKAG 360

Query: 361 GECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERA 408
           GECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERA
Sbjct: 361 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERA 420

[Close]

BLAST of Chy8G156450 vs. NCBI nr
Match: OWM72463.1 (hypothetical protein CDL15_Pgr018348 [Punica granatum])

HSP 1 Score: 641 bits (1653), Expect = 1.43e-225
Identity = 333/406 (82.02%), Postives = 349/406 (85.96%), Query Frame = 0


Query: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62
           K+FS EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVL+DLLPKK+PLIV KCQNHLNLV+
Sbjct: 264 KRFSYEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHLNLVL 323

Query: 63  VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVL 122
           VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG L
Sbjct: 324 VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGAL 383

Query: 123 DDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGPIQ 182
           DD+VE+ETPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWK      
Sbjct: 384 DDKVESETPVAIMAEGKQHALAIGFTKMSAKDIRAVNKGIGVDNMHYLNDGLWK------ 443

Query: 183 LTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAPKS 242
                                                   GIDL AGGKSKKT+R APKS
Sbjct: 444 ----------------------------------------GIDLKAGGKSKKTRRTAPKS 503

Query: 243 DDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVV 302
           DDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKPPLSLSRLI++  GK+ KIAVV
Sbjct: 504 DDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIRYMSGKDDKIAVV 563

Query: 303 VGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 362
           VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP
Sbjct: 564 VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 623

Query: 363 KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 408
           KN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+RNSRG+RV
Sbjct: 624 KNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 623

[Close]

BLAST of Chy8G156450 vs. NCBI nr
Match: RAL52647.1 (hypothetical protein DM860_007415 [Cuscuta australis])

HSP 1 Score: 628 bits (1620), Expect = 1.26e-224
Identity = 323/408 (79.17%), Postives = 345/408 (84.56%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKF  E+VS QNQVKASVQRKIRQSIAEEYPGLE VLDDLLPKK+PLIV KC NHLNL
Sbjct: 1   MFKKFCNEEVSGQNQVKASVQRKIRQSIAEEYPGLEHVLDDLLPKKSPLIVAKCPNHLNL 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKWAGP 180
           VLD+EVEAETPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK    
Sbjct: 121 VLDEEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWK---- 180

Query: 181 IQLTKWERAIQHYKRGFENPDSYSPPSSTPAAPVDTRRAFVMGIDLVAGGKSKKTKRVAP 240
                                                     GIDL AGGKSK+TKR AP
Sbjct: 181 ------------------------------------------GIDLKAGGKSKQTKRTAP 240

Query: 241 KSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIA 300
           KS+D+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK N+PPLSLSRLI F  GKE KIA
Sbjct: 241 KSEDVYLKLLVKLYRFLVRRTGSKFNAVVLKRLFMSKTNRPPLSLSRLIAFMSGKEDKIA 300

Query: 301 VVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLR 360
           V+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKAGGECLTFDQLALRAPLGQNT+LLR
Sbjct: 301 VLVGTITDDVRVYEVPAMKVCALRFTQTARARIEKAGGECLTFDQLALRAPLGQNTILLR 360

Query: 361 GPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 408
           GPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+RNSRGY+ 
Sbjct: 361 GPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGYKA 362

[Close]

BLAST of Chy8G156450 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-88
Identity = 162/187 (86.63%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MGIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 282 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 341
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 342 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 401
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 402 NSRGYRV 409
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Chy8G156450 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-88
Identity = 161/187 (86.10%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 222 MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 281
           MGIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 282 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 341
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 342 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 401
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 402 NSRGYRV 409
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Chy8G156450 vs. TAIR 10
Match: AT1G09150.1 (pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein )

HSP 1 Score: 309.7 bits (792), Expect = 3.5e-84
Identity = 150/176 (85.23%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNL 60
           MFKKF  E++S+QNQVKASVQR+IRQSI +EYPGLE V++DLLPKK PLIV KC NHL L
Sbjct: 1   MFKKFCLEEISSQNQVKASVQRRIRQSIQDEYPGLESVMEDLLPKKIPLIVVKCPNHLTL 60

Query: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120
           VVVNNVPLFF IRDGPYMPTLRLLHQYPNIMK+ QVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFCIRDGPYMPTLRLLHQYPNIMKRFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 121 VLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK 177
           VLD EVEAE PVAI AEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK
Sbjct: 121 VLDQEVEAERPVAIYAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWK 176

[Close]

BLAST of Chy8G156450 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 6.1e-52
Identity = 100/135 (74.07%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 275 MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 334
           MSKVNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 335 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 394
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 395 FERARGKRNSRGYRV 409
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]

BLAST of Chy8G156450 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 6.1e-52
Identity = 100/135 (74.07%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 275 MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 334
           MSKVNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 335 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 394
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 395 FERARGKRNSRGYRV 409
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of Chy8G156450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	1.5e-87	86.63	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	4.3e-87	86.10	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	4.6e-81	83.15	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
O22254	7.7e-76	76.60	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]
P12001	2.0e-63	67.02	60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2	[more]

BLAST of Chy8G156450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9RFD6	4.4e-183	82.89	60S ribosomal protein L18, putative OS=Ricinus communis OX=3988 GN=RCOM_1433890 ...	[more]
A0A6N2KBM1	5.7e-183	80.53	PUA domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS63739 PE=...	[more]
A0A218WIU0	5.4e-181	82.02	PUA domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018348 PE=...	[more]
A0A328E3X4	4.7e-177	79.36	PUA domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_007415 PE=...	[more]
A0A5N5MMN8	1.0e-176	80.25	PUA domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_007107 PE=4...	[more]

BLAST of Chy8G156450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_034707149.1	4.04e-232	76.10	uncharacterized protein LOC117930626 [Vitis riparia]	[more]
EEF49907.1	6.95e-232	82.89	60S ribosomal protein L18, putative [Ricinus communis]	[more]
XP_031101783.1	9.20e-230	78.19	uncharacterized protein LOC116005680 [Ipomoea triloba]	[more]
OWM72463.1	1.43e-225	82.02	hypothetical protein CDL15_Pgr018348 [Punica granatum]	[more]
RAL52647.1	1.26e-224	79.17	hypothetical protein DM860_007415 [Cuscuta australis]	[more]

BLAST of Chy8G156450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	1.1e-88	86.63	ribosomal protein L18	[more]
AT5G27850.1	3.1e-88	86.10	Ribosomal protein L18e/L15 superfamily protein	[more]
AT1G09150.1	3.5e-84	85.23	pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing ...	[more]
AT2G47570.1	6.1e-52	74.07	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	6.1e-52	74.07	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 92..171 e-value: 1.6E-12 score: 57.6
IPR002478	PUA domain	PFAM	PF01472	PUA	coord: 93..170 e-value: 3.4E-18 score: 65.4
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 223..408 e-value: 5.2E-93 score: 309.7
None	No IPR available	GENE3D	3.100.10.10		coord: 222..408 e-value: 5.9E-98 score: 327.8
None	No IPR available	GENE3D	3.10.400.20		coord: 1..180 e-value: 6.0E-57 score: 194.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..408
None	No IPR available	PANTHER	PTHR10934:SF16	BNAC02G39900D PROTEIN	coord: 218..408
None	No IPR available	PROSITE	PS50890	PUA	coord: 91..171 score: 14.960995
None	No IPR available	CDD	cd11609	MCT1_N	coord: 3..79 e-value: 7.59335E-43 score: 142.673
IPR004521	Uncharacterised domain CHP00451	TIGRFAM	TIGR00451	TIGR00451	coord: 62..172 e-value: 4.9E-24 score: 82.6
IPR041366	Pre-PUA domain	PFAM	PF17832	Pre-PUA	coord: 7..88 e-value: 3.5E-26 score: 91.7
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 218..408
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 241..360
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 91..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G156450.1	Chy8G156450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0001731	formation of translation preinitiation complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding