Chy8G155860 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G155860
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH08: 17059048 .. 17059569 (+)
RNA-Seq Expression	Chy8G155860
Synteny	Chy8G155860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCCTCCAACATCGGCGGTTTCGGCTACGGAATTGGCGTCTCCTTAGGCCTTTTGATTCTCATCACTACCATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGGACTCCTCCCAATCGCTCCCCGCCCCAAGCGGTGGAGGAATTGGATTCCGTCGTCGTTGAAATCGGACTCGATCAGGAAACCATTACGAGTTATCCCAAATTACTGTATTCTGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCCACTTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGA

mRNA sequence

ATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCCTCCAACATCGGCGGTTTCGGCTACGGAATTGGCGTCTCCTTAGGCCTTTTGATTCTCATCACTACCATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGGACTCCTCCCAATCGCTCCCCGCCCCAAGCGGTGGAGGAATTGGATTCCGTCGTCGTTGAAATCGGACTCGATCAGGAAACCATTACGAGTTATCCCAAATTACTGTATTCTGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCCACTTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGA

Coding sequence (CDS)

ATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCCTCCAACATCGGCGGTTTCGGCTACGGAATTGGCGTCTCCTTAGGCCTTTTGATTCTCATCACTACCATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGGACTCCTCCCAATCGCTCCCCGCCCCAAGCGGTGGAGGAATTGGATTCCGTCGTCGTTGAAATCGGACTCGATCAGGAAACCATTACGAGTTATCCCAAATTACTGTATTCTGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCCACTTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGA

Protein sequence

MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD*

Homology

[Close]

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-49
Identity = 101/163 (61.96%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 10  GFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSPPQAVE 69
           G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+     +  N+   +   
Sbjct: 54  GLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSP----SQTNQDSTRIHH 113

Query: 70  ELDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDC 129
               V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC
Sbjct: 114 HHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDC 173

Query: 130 GHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 171
            HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 174 NHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-45
Identity = 96/177 (54.24%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI-------QRTPPNRSPP 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          QR      PP
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  QAV------EELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
                    +E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 172
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

[Close]

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-30
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSP---PQAV------- 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ T         P+ +       
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 170
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-26
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSPPQAVEELDSVVVEI 78
           G GYGI +++ +L+LI+ I+LASY C R+        + T  + +    V +L S   E+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRS--------KSTGRDEATSDVVLDLPSPAAEV 71

Query: 79  --GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCV 138
             GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CV
Sbjct: 72  KLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCV 131

Query: 139 DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 170
           D WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 DEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.4e-24
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTR-NGLSSTSVIQRTPPNRS-------PPQAV-- 78
           G GY I ++LG L+LI+TI+L+SY C R + L  ++       N S        P+ +  
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  ---EELDS-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
              ++L+S  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 170
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]

BLAST of Chy8G155860 vs. ExPASy TrEMBL
Match: A0A0A0KIW7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV+QRTPP
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVVQRTPP 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQAV E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  NRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 174
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Chy8G155860 vs. ExPASy TrEMBL
Match: A0A5A7SKL1 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001830 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.3e-87
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ T  
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQST-A 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           +RSPPQAV ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  SRSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 174
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Chy8G155860 vs. ExPASy TrEMBL
Match: A0A1S3CHE9 (RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.3e-87
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ T  
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQST-A 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           +RSPPQAV ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  SRSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 174
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Chy8G155860 vs. ExPASy TrEMBL
Match: A0A6J1IL86 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 152/173 (87.86%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R   
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERN-T 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+V
Sbjct: 61  NRSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 174
           LR LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of Chy8G155860 vs. ExPASy TrEMBL
Match: A0A6J1EJP9 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.6e-78
Identity = 151/173 (87.28%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R   
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERN-S 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E  + VV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+V
Sbjct: 61  NRSPPQAEGEA-AAVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 174
           LR LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of Chy8G155860 vs. NCBI nr
Match: XP_004143342.1 (RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein Csa_003973 [Cucumis sativus])

HSP 1 Score: 335 bits (860), Expect = 6.89e-116
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV+QRTPP
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVVQRTPP 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQAV E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  NRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Chy8G155860 vs. NCBI nr
Match: XP_008462625.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK07452.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (846), Expect = 9.40e-114
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ T  
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTA- 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           +RSPPQAV ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  SRSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Chy8G155860 vs. NCBI nr
Match: XP_038883587.1 (RING-H2 finger protein ATL70-like [Benincasa hispida])

HSP 1 Score: 311 bits (796), Expect = 3.32e-106
Identity = 156/173 (90.17%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRN LSSTS       
Sbjct: 1   MNNSTADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNSLSSTSA------ 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQ  E+L++V+VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  NRSPPQTEEQLEAVIVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 167

[Close]

BLAST of Chy8G155860 vs. NCBI nr
Match: XP_022977896.1 (RING-H2 finger protein ATL70-like [Cucurbita maxima])

HSP 1 Score: 302 bits (773), Expect = 1.22e-102
Identity = 152/173 (87.86%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R   
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNT- 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+V
Sbjct: 61  NRSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LR LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of Chy8G155860 vs. NCBI nr
Match: XP_023544988.1 (RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302 bits (773), Expect = 1.22e-102
Identity = 152/173 (87.86%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPP 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R   
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNS- 60

Query: 61  NRSPPQAVEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+V
Sbjct: 61  NRSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LR LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of Chy8G155860 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 8.3e-51
Identity = 101/163 (61.96%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 10  GFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSPPQAVE 69
           G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+     +  N+   +   
Sbjct: 54  GLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSP----SQTNQDSTRIHH 113

Query: 70  ELDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDC 129
               V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC
Sbjct: 114 HHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDC 173

Query: 130 GHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 171
            HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 174 NHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of Chy8G155860 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.1e-46
Identity = 96/177 (54.24%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI-------QRTPPNRSPP 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          QR      PP
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  QAV------EELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
                    +E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 172
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

[Close]

BLAST of Chy8G155860 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 8.6e-32
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSP---PQAV------- 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ T         P+ +       
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 170
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of Chy8G155860 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTPPNRSPPQAVEELDSVVVEI 78
           G GYGI +++ +L+LI+ I+LASY C R+        + T  + +    V +L S   E+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRS--------KSTGRDEATSDVVLDLPSPAAEV 71

Query: 79  --GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCV 138
             GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CV
Sbjct: 72  KLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCV 131

Query: 139 DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 170
           D WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 DEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Chy8G155860 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-25
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTR-NGLSSTSVIQRTPPNRS-------PPQAV-- 78
           G GY I ++LG L+LI+TI+L+SY C R + L  ++       N S        P+ +  
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  ---EELDS-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
              ++L+S  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 170
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

The following BLAST results are available for this feature:

BLAST of Chy8G155860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	1.2e-49	61.96	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	3.0e-45	54.24	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	1.2e-30	42.86	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9FL42	3.1e-26	40.52	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9M313	8.4e-24	38.42	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]

BLAST of Chy8G155860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIW7	1.0e-88	97.11	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 P...	[more]
A0A5A7SKL1	4.3e-87	97.11	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CHE9	4.3e-87	97.11	RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 S...	[more]
A0A6J1IL86	1.2e-78	87.86	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE...	[more]
A0A6J1EJP9	3.6e-78	87.28	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 ...	[more]

BLAST of Chy8G155860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143342.1	6.89e-116	97.11	RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein ...	[more]
XP_008462625.1	9.40e-114	97.11	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H...	[more]
XP_038883587.1	3.32e-106	90.17	RING-H2 finger protein ATL70-like [Benincasa hispida]	[more]
XP_022977896.1	1.22e-102	87.86	RING-H2 finger protein ATL70-like [Cucurbita maxima]	[more]
XP_023544988.1	1.22e-102	87.86	RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy8G155860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	8.3e-51	61.96	RING/U-box superfamily protein	[more]
AT5G06490.1	2.1e-46	54.24	RING/U-box superfamily protein	[more]
AT2G46160.1	8.6e-32	42.86	RING/U-box superfamily protein	[more]
AT5G07040.1	2.2e-27	40.52	RING/U-box superfamily protein	[more]
AT3G61550.1	6.0e-25	38.42	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 108..149 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..150 e-value: 1.6E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 108..150 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 68..154 e-value: 2.1E-22 score: 80.6
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 4..171
None	No IPR available	PANTHER	PTHR46719:SF2	RING-H2 FINGER PROTEIN ATL70-LIKE	coord: 4..171
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 107..150 e-value: 5.75915E-20 score: 76.1865
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 84..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G155860.1	Chy8G155860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane