Chy8G155570 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G155570
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH08: 16845075 .. 16845653 (-)
RNA-Seq Expression	Chy8G155570
Synteny	Chy8G155570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCAAAAAGTTAAGTTCAGAAAGGATTAATTCTTTCACACATCTAATTGAATCATCATCCTTGCCATGAGTTAATATCCATATTGTCAGGCGCTTAGAAAAGAAAACAACATGAACAAGAACAAAATCAAATACAAATATCACAAAAATCGAATACTAAATGTAACCCACCGTAGAGTAAGGCATAGACAACATCCATAAGGATCTGAAACTCAACTTGTCTGAAAATAAACTAACGAGAGAGCAGAAAAGCTAAATCGTTGGAGTTTCAGACAACCAGTAGGAGATCCAAAAGCGGATAACAAATGCCTTGAGATCAAGATCAAGTGGGAAACGAAGAGAATTCCAGCAGGAAAACCCTAGTGGAATTCTCCGAAAAGAGTGTTCGCTGTAGCGCAGCTATGACTCGAGACGCTTCCATTTCCCACAGAGGAAGGCGATCTTAAGGGCCGCGCAAAGAAATTAGAAATGGAAGTGCACCAAAAGTACCAATGCAGAATAAAAATACAACGATGAGAAACAAACCCTAGAAGATGAAGTAGACATGGGGGCTGTAAGAAACAGATAAACCCTAAAAAT

mRNA sequence

CCTCAAAAAGTTAAGTTCAGAAAGGATTAATTCTTTCACACATCTAATTGAATCATCATCCTTGCCATGAGTTAATATCCATATTGTCAGGCGCTTAGAAAAGAAAACAACATGAACAAGAACAAAATCAAATACAAATATCACAAAAATCGAATACTAAATGTAACCCACCGTAGAGTAAGGCATAGACAACATCCATAAGGATCTGAAACTCAACTTGTCTGAAAATAAACTAACGAGAGAGCAGAAAAGCTAAATCGTTGGAGTTTCAGACAACCAGTAGGAGATCCAAAAGCGGATAACAAATGCCTTGAGATCAAGATCAAGTGGGAAACGAAGAGAATTCCAGCAGGAAAACCCTAGTGGAATTCTCCGAAAAGAGTGTTCGCTGTAGCGCAGCTATGACTCGAGACGCTTCCATTTCCCACAGAGGAAGGCGATCTTAAGGGCCGCGCAAAGAAATTAGAAATGGAAGTGCACCAAAAGTACCAATGCAGAATAAAAATACAACGATGAGAAACAAACCCTAGAAGATGAAGTAGACATGGGGGCTGTAAGAAACAGATAAACCCTAAAAAT

Coding sequence (CDS)

CCTCAAAAAGTTAAGTTCAGAAAGGATTAATTCTTTCACACATCTAATTGAATCATCATCCTTGCCATGAGTTAATATCCATATTGTCAGGCGCTTAGAAAAGAAAACAACATGAACAAGAACAAAATCAAATACAAATATCACAAAAATCGAATACTAAATGTAACCCACCGTAGAGTAAGGCATAGACAACATCCATAAGGATCTGAAACTCAACTTGTCTGAAAATAAACTAACGAGAGAGCAGAAAAGCTAAATCGTTGGAGTTTCAGACAACCAGTAGGAGATCCAAAAGCGGATAACAAATGCCTTGAGATCAAGATCAAGTGGGAAACGAAGAGAATTCCAGCAGGAAAACCCTAGTGGAATTCTCCGAAAAGAGTGTTCGCTGTAGCGCAGCTATGACTCGAGACGCTTCCATTTCCCACAGAGGAAGGCGATCTTAAGGGCCGCGCAAAGAAATTAGAAATGGAAGTGCACCAAAAGTACCAATGCAGAATAAAAATACAACGATGAGAAACAAACCCTAGAAGATGAAGTAGACATGGGGGCTGTAAGAAACAGATAAACCCTAAAAAT

Protein sequence

PQKVKFRKD*FFHTSN*IIILAMS*YPYCQALRKENNMNKNKIKYKYHKNRILNVTHRRVRHRQHP*GSETQLV*K*TNERAEKLNRWSFRQPVGDPKADNKCLEIKIKWETKRIPAGKP*WNSPKRVFAVAQL*LETLPFPTEEGDLKGRAKKLEMEVHQKYQCRIKIQR*ETNPRR*SRHGGCKKQINPKN

Homology

The following BLAST results are available for this feature:

BLAST of Chy8G155570 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G155570 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G155570 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G155570 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G155570.1	Chy8G155570.1	mRNA