Chy8G154570 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G154570
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH08: 15989941 .. 15990903 (+)
RNA-Seq Expression	Chy8G154570
Synteny	Chy8G154570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCGACAACAACCTATCTTCAAAGACGCAAAGGGATTTGCCGGTTATCAGGTGCGCTAGCGCGATCGACAACACTAAGGAAAAGGTTCTCATCACAAGGAATGCAGAGTTTGGAGTTTGCAGTGAAATCAAACTCATCTTGTGCTTGATCCAGCAATGCCTTGAACAGAGGGTGATTGAGAAGGCTAATTTTGATTACAAACCTTCTCTTATTCTCACCCACATAGACAACCAAGTGACCCTTCGGGACGTCTCGCGGGATGAAGCAATCCTCATGCAAGGGAGACCACAAAACCCATTGGCAGCAGTGCTCACAGGCTGTGCAAGGTACAACTTTACTCCCTATCTTCCTCCATTTGTTTGCACATGCTCTTATAAACCTCCCCTTCTTCATATTCAGTATGTAGCTGTAGCTAGTGAATTTGAGAGAAAGAGAGATAGAGAGATAGGTATGGTATTAAAGAGAAGCTGATAGGTATATATAAGAGTGGATGGAGAAGACTATTAAATGGTTGACATGATAGATATAGCTAAGCAGTGGGCTTCGTTACTGTATGGCATTCTCTCTTTGACAGTGCATTTTATATTATAGTAGATGCACCTTTGCCGTGCTGTACCGATTTACTTTATTATATTATTGCATCTCTAAATGATACGAATTGTACGAACATTCATGGCATAGTTTTGAGATGAGAGATTGTATATATTCAAATATAAAAAAATATTATTCTTTCCATATGGGGAAGAGAGAGATAGATGGATCTGCTATATGAAATCTCTTTCTTCTTTTGGCAAAGCATGGTGTAATGGTTGACTGATTTTTTTCCCCAAAGTTCTTGTAGTTAAATTTGTAATGGACCCACATGATTGGAGTGGACAAGAGATAAGATTTGAAAGAGGGGATGGAGATAACTTTCTTGGGCTTAGTGGCGATCCCACTTATTTCTATGACTTTTAA

mRNA sequence

ATGAAATTCGACAACAACCTATCTTCAAAGACGCAAAGGGATTTGCCGGTTATCAGGTGCGCTAGCGCGATCGACAACACTAAGGAAAAGGTTCTCATCACAAGGAATGCAGAGTTTGGAGTTTGCAGTGAAATCAAACTCATCTTGTGCTTGATCCAGCAATGCCTTGAACAGAGGGTGATTGAGAAGGCTAATTTTGATTACAAACCTTCTCTTATTCTCACCCACATAGACAACCAAGTGACCCTTCGGGACGTCTCGCGGGATGAAGCAATCCTCATGCAAGGGAGACCACAAAACCCATTGGCAGCAGTGCTCACAGGCTGTGCAAGTGCATTTTATATTATAGTAGATGCACCTTTGCCGTGCTGTACCGATTTACTTTATTATATTATTGCATCTCTAAATGATACGAATTTTAAATTTGTAATGGACCCACATGATTGGAGTGGACAAGAGATAAGATTTGAAAGAGGGGATGGAGATAACTTTCTTGGGCTTAGTGGCGATCCCACTTATTTCTATGACTTTTAA

Coding sequence (CDS)

ATGAAATTCGACAACAACCTATCTTCAAAGACGCAAAGGGATTTGCCGGTTATCAGGTGCGCTAGCGCGATCGACAACACTAAGGAAAAGGTTCTCATCACAAGGAATGCAGAGTTTGGAGTTTGCAGTGAAATCAAACTCATCTTGTGCTTGATCCAGCAATGCCTTGAACAGAGGGTGATTGAGAAGGCTAATTTTGATTACAAACCTTCTCTTATTCTCACCCACATAGACAACCAAGTGACCCTTCGGGACGTCTCGCGGGATGAAGCAATCCTCATGCAAGGGAGACCACAAAACCCATTGGCAGCAGTGCTCACAGGCTGTGCAAGTGCATTTTATATTATAGTAGATGCACCTTTGCCGTGCTGTACCGATTTACTTTATTATATTATTGCATCTCTAAATGATACGAATTTTAAATTTGTAATGGACCCACATGATTGGAGTGGACAAGAGATAAGATTTGAAAGAGGGGATGGAGATAACTTTCTTGGGCTTAGTGGCGATCCCACTTATTTCTATGACTTTTAA

Protein sequence

MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRVIEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCASAFYIIVDAPLPCCTDLLYYIIASLNDTNFKFVMDPHDWSGQEIRFERGDGDNFLGLSGDPTYFYDF*

Homology

[Close]

BLAST of Chy8G154570 vs. ExPASy TrEMBL
Match: A0A0A0KEQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446320 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.1e-53
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCA 111
           IEKANFDYKPSLILTHIDNQVTL DVSRDEAILMQGRPQNPLAAVLTGCA
Sbjct: 61  IEKANFDYKPSLILTHIDNQVTLGDVSRDEAILMQGRPQNPLAAVLTGCA 110

[Close]

BLAST of Chy8G154570 vs. ExPASy TrEMBL
Match: A0A5D3C230 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00080 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.2e-49
Identity = 106/123 (86.18%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPV+RCAS IDNTKEKVLITRNAEFGV SEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVVRCASTIDNTKEKVLITRNAEFGVRSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCASAFYIIVDAP 120
           IEKANFDYKPSLILT+IDNQVTLRDVS DEAILMQ RPQNPLAAVLTGCA   +     P
Sbjct: 61  IEKANFDYKPSLILTYIDNQVTLRDVSWDEAILMQRRPQNPLAAVLTGCARYNFTSYFPP 120

Query: 121 LPC 124
             C
Sbjct: 121 FVC 123

[Close]

BLAST of Chy8G154570 vs. ExPASy TrEMBL
Match: A0A5A7U0W9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00340 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.2e-49
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPV+RCAS IDNTKEKVLITRNAEFGV SEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVVRCASTIDNTKEKVLITRNAEFGVRSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCASAFYIIV 118
           IEKANFDYKPSLILT+IDNQVTLRDVS DEAILMQ RPQNPLAAVLTGCA   + ++
Sbjct: 61  IEKANFDYKPSLILTYIDNQVTLRDVSWDEAILMQRRPQNPLAAVLTGCARCTFAVL 117

[Close]

BLAST of Chy8G154570 vs. ExPASy TrEMBL
Match: W9RWZ4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024366 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.2e-09
Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 25 DNTKEKVLITRNAEFGVCS-EIKLILCLIQQCLEQRVIEKANFDYKPSLILTHIDNQVTL 84
          ++ +EK L+  +AEFGV S E+KLI  L++QCLE+RVIE+ +FD KP ++L +ID+QVTL
Sbjct: 23 NDVEEKALVAGDAEFGVSSGEVKLIASLVKQCLEERVIEQGDFDDKPLVVLAYIDHQVTL 82

Query: 85 RDVSRD 90
           D+  D
Sbjct: 83 WDILWD 88

[Close]

BLAST of Chy8G154570 vs. ExPASy TrEMBL
Match: A0A151TV08 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_010126 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 41  VCSEIKLILCLIQQCLEQRVIEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQN 100
           VC+EI LIL LIQQ LE+R++E+ N D    ++L+H+ NQVTL  +  D    M G P  
Sbjct: 1   VCNEIILILSLIQQGLEERMVEQRNVDDISLMLLSHVHNQVTLWHIVGDGVSFMHGCPHF 60

Query: 101 P 102
           P
Sbjct: 61  P 61

[Close]

BLAST of Chy8G154570 vs. NCBI nr
Match: KAE8647397.1 (hypothetical protein Csa_003472 [Cucumis sativus])

HSP 1 Score: 218 bits (554), Expect = 2.56e-69
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCA 110
           IEKANFDYKPSLILTHIDNQVTL DVSRDEAILMQGRPQNPLAAVLTGCA
Sbjct: 61  IEKANFDYKPSLILTHIDNQVTLGDVSRDEAILMQGRPQNPLAAVLTGCA 110

[Close]

BLAST of Chy8G154570 vs. NCBI nr
Match: KAA0047241.1 (hypothetical protein E6C27_scaffold908G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (524), Expect = 2.08e-65
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPV+RCAS IDNTKEKVLITRNAEFGV SEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVVRCASTIDNTKEKVLITRNAEFGVRSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCASAFYIIV 117
           IEKANFDYKPSLILT+IDNQVTLRDVS DEAILMQ RPQNPLAAVLTGCA   + ++
Sbjct: 61  IEKANFDYKPSLILTYIDNQVTLRDVSWDEAILMQRRPQNPLAAVLTGCARCTFAVL 117

[Close]

BLAST of Chy8G154570 vs. NCBI nr
Match: TYK05877.1 (hypothetical protein E5676_scaffold432G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (524), Expect = 1.22e-64
Identity = 106/123 (86.18%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MKFDNNLSSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRV 60
           MKFDNNLSSKTQRDLPV+RCAS IDNTKEKVLITRNAEFGV SEIKLILCLIQQCLEQRV
Sbjct: 1   MKFDNNLSSKTQRDLPVVRCASTIDNTKEKVLITRNAEFGVRSEIKLILCLIQQCLEQRV 60

Query: 61  IEKANFDYKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGCASAFYIIVDAP 120
           IEKANFDYKPSLILT+IDNQVTLRDVS DEAILMQ RPQNPLAAVLTGCA   +     P
Sbjct: 61  IEKANFDYKPSLILTYIDNQVTLRDVSWDEAILMQRRPQNPLAAVLTGCARYNFTSYFPP 120

Query: 121 LPC 123
             C
Sbjct: 121 FVC 123

[Close]

BLAST of Chy8G154570 vs. NCBI nr
Match: KAF8403084.1 (hypothetical protein HHK36_011178 [Tetracentron sinense])

HSP 1 Score: 96.3 bits (238), Expect = 2.14e-19
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 8   SSKTQRDLPVIRCASAIDNTKEKVLITRNAEFGVCSEIKLILCLIQQCLEQRVIEKANFD 67
           +SKTQRD  V R   A  N KE VL+  +A+FGV +E+ L+L LI+QCL++R++E+ANFD
Sbjct: 52  TSKTQRDPLVSRRVGAAKNAKENVLVAGDAKFGVGAELVLLLSLIEQCLKERMVEQANFD 111

Query: 68  YKPSLILTHIDNQVTLRDVSRDEAILMQGRPQNPLAAVLTGC 109
            KP ++ T+ID Q+TL D+  D  + +Q  PQ+P + ++T C
Sbjct: 112 DKPLILFTYIDYQMTLGDIFWDGVLFVQASPQSP-STMVTNC 152

[Close]

BLAST of Chy8G154570 vs. NCBI nr
Match: EXC16195.1 (hypothetical protein L484_024366 [Morus notabilis])

HSP 1 Score: 70.9 bits (172), Expect = 1.62e-12
Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 25 DNTKEKVLITRNAEFGVCS-EIKLILCLIQQCLEQRVIEKANFDYKPSLILTHIDNQVTL 84
          ++ +EK L+  +AEFGV S E+KLI  L++QCLE+RVIE+ +FD KP ++L +ID+QVTL
Sbjct: 23 NDVEEKALVAGDAEFGVSSGEVKLIASLVKQCLEERVIEQGDFDDKPLVVLAYIDHQVTL 82

Query: 85 RDVSRD 89
           D+  D
Sbjct: 83 WDILWD 88

The following BLAST results are available for this feature:

BLAST of Chy8G154570 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G154570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEQ0	4.1e-53	99.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446320 PE=4 SV=1	[more]
A0A5D3C230	1.2e-49	86.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U0W9	1.2e-49	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
W9RWZ4	6.2e-09	53.03	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024366 PE=4 SV=1	[more]
A0A151TV08	2.1e-04	47.54	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_010126 PE=4 S...	[more]

BLAST of Chy8G154570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647397.1	2.56e-69	99.09	hypothetical protein Csa_003472 [Cucumis sativus]	[more]
KAA0047241.1	2.08e-65	88.89	hypothetical protein E6C27_scaffold908G00340 [Cucumis melo var. makuwa]	[more]
TYK05877.1	1.22e-64	86.18	hypothetical protein E5676_scaffold432G00080 [Cucumis melo var. makuwa]	[more]
KAF8403084.1	2.14e-19	47.06	hypothetical protein HHK36_011178 [Tetracentron sinense]	[more]
EXC16195.1	1.62e-12	53.03	hypothetical protein L484_024366 [Morus notabilis]	[more]

BLAST of Chy8G154570 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G154570.1	Chy8G154570.1	mRNA