Chy8G154050 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G154050
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
Location	chrH08: 15609090 .. 15611566 (+)
RNA-Seq Expression	Chy8G154050
Synteny	Chy8G154050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAACCTCAGTCTCCTCCGCAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCTGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAACCCCCACCTGAGTCCTCCCCTAATCGTTTTTTCGATAAAACAAATACAGATGGTATGAACCTCGCTCCTACGTCGTCGCAGCATCTGGACGATGTTCTTATGTCGTGTGTAATATCTTGGGAGAGGTTTAGGTTTTATAGATGGTGGTGGGGTATAATTTTTTGGCTGATTGTTTGAAACGAGTTAGTTAGGGTTTGTATCTTGGGCCCTGCTTAACTAAATCCTTTCGGTGCATTTTATTTTGGTAATTAATTTCTCGTCTGATGTTATGTGGTGCAATGCATAATGTGGTTTTTGTGATACTCTTCTCAGGTTTGAGGTTCGGAAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATGTAATTTGAGTTTGGATGATGTCAAATTTGAATACGTCCGAAATTTCGTCCCAGCCTCTATGTAATATTCTTCATTTGGATTATTTTTTATGTAGATGTTCCTTTATTTTGCTCTACCACTGTTGTTATGGTTCTATTTCTACTGCGTCATGGAAACTTGGAAACTAAAACGATCGAAGAGTATCTAATTGCCCTTTTGTTCCTTCGATCATTTTAAGACAAATGCATTCGATCATTTTAAGACAAATGCAGCTCTAAACCCTGGATATTAGCTTATATGTTAATCTATTGAATATATGTTCAATCAAGTGTGTTGTTTGTGAATATATACTTGAGTAACATTGGTGTTTGAGGTTGGTTTTCATTAATTATTTATGAATGTTGTAATCAGAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGTGATCTTTTGATGAATGCCTTATTATTGAATTTTTTTTAATTATGTTTTTAAAATTTTAGAAATCTATAACTTTTATTCTAAATTTCAGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTAATGTCAATCTTTGTTGTTAAACTTATGAACTTACCATCAATTGAGAAATCTCTTTTTTCAATCATATTCTTGTTTTTGCCTTTGGCAACTTTGATTTCCTTTTATCAGAAAGCAACCATTCTACTTTAGTTTTGTTTATCTAATATCATGTGATCGAATGACATGGTTTCAAGGATCAAGTATACATATTGATGTTCTCTCTTCTTCTAGTGCATTATGATTAACTTTAGTGGTTCGTTCCTTACACTCTCAATCTAAAATTGTTTATAGAGAGTAATTTTTCATGTTAAGCTCTTTAGAAGAGAGTAAAAAGTATTTGCTAAGTTCCATGTGGTCGGGATCTTCTCTTATAGCTTCTTGAGAATGTAAAATTGCAGGAACTACCTCAACTATTAAGGTTTGGGTTTTTCATAATAAGTTCATTTGTAAGGATAATAATGCACTGATTCAATTGATACTTGATGCTTCAAGATTGGGGATTGGCAAATGGCAACCTTCCTAGCTTTAGGTTTGTTGTTCATAAAATTGTATGCTGCTTATTGTGCAGACTGCAGTTAATTTGTATCTCATATTAAATTTAAACCTTAGATTGATTCTGAAGTTGTTTTTGTGAGATTCAATCTTCTTTGCATTTATAGGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGGAAGCTCAATCAACTTTTACAGGTAGAGATCAATTATTTGTGACGAAGTTTAGAGTTAGAATTACCTCGCTATTACTTAGTGTAAATATTCACCTCTTTTACTTCTAGCTTTGCTAATTTTCTCGAATTGGAGAGGTTTATTGTATCTCCTTTTGGATATAAGTTTATTGCTCCTTTCGTTTGTAAGTTCGTTCCATGCATCAATCAAATTGTTTCTTATAAAGAAAACAAATTATACATAAAACAAAATCATGACTAATGTAGTATTATTTGTATGAATTTTGGGTGATGCATGGTTTGGTTTCATTCTATTGTATATATAATCTAAATAGTTGGGTCGTTTCGGATCTGATTTGCAAAACCTAACTGAACCAAAAGTTCAGATTCCTTATGATTTCAAGCTGAATCTAACCATCATTTAGTGTAAATTGAATTTTTGGATTCGGTTACATTTAGTCGGTTTTAATGAACACTTGTAATTTGATACACCATTGCAGGGGTTCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCTGTTCCGTTCACCAGTACAAGCAATGCATGCATTTCTCACAAAGAACAGAGGCTTTTGTTTGAACAACCAAATTTCGATGCGAGTTCTCCAATAA

mRNA sequence

ATGTCGAACCTCAGTCTCCTCCGCAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCTGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAACCCCCACCTGAGTCCTCCCCTAATCGTTTTTTCGATAAAACAAATACAGATGGTATGAACCTCGCTCCTACGTCGTCGCAGCATCTGGACGATGTTCTTATGTCGTGTGTAATATCTTGGGAGAGGTTTAGGTTTGAGGTTCGGAAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGGAAGCTCAATCAACTTTTACAGGGGTTCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCTGTTCCGTTCACCAGTACAAGCAATGCATGCATTTCTCACAAAGAACAGAGGCTTTTGTTTGAACAACCAAATTTCGATGCGAGTTCTCCAATAA

Coding sequence (CDS)

ATGTCGAACCTCAGTCTCCTCCGCAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCTGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAACCCCCACCTGAGTCCTCCCCTAATCGTTTTTTCGATAAAACAAATACAGATGGTATGAACCTCGCTCCTACGTCGTCGCAGCATCTGGACGATGTTCTTATGTCGTGTGTAATATCTTGGGAGAGGTTTAGGTTTGAGGTTCGGAAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGGAAGCTCAATCAACTTTTACAGGGGTTCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCTGTTCCGTTCACCAGTACAAGCAATGCATGCATTTCTCACAAAGAACAGAGGCTTTTGTTTGAACAACCAAATTTCGATGCGAGTTCTCCAATAA

Protein sequence

MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTDGMNLAPTSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFASRIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDGSSINFYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ*

Homology

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BLAST of Chy8G154050 vs. ExPASy TrEMBL
Match: A0A0A0L225 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293110 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.9e-92
Identity = 187/240 (77.92%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNLSLLRKALGSNFISRSATANHELPLFF QSPRFFSTEQEQ PPESSPNRF DKTNTD
Sbjct: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60

Query: 61  GMN----LAPTSSQHLDDVLM---SCVISWERFRFE-VRKIGRCLTEYAKIGCAHFASRI 120
           G+     +  + S    DVL+    C +S+E  +FE VR                  + I
Sbjct: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNF--------------VPTSI 120

Query: 121 MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE 180
           MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE
Sbjct: 121 MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE 180

Query: 181 RFLSGCDYDGSSINFYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 233
           RFLSGCDYD SSINFYRGSFSAPTKTATV FRSP+QAMHAFLTKNRGFCLNNQISMRVLQ
Sbjct: 181 RFLSGCDYDASSINFYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 226

[Close]

BLAST of Chy8G154050 vs. ExPASy TrEMBL
Match: A0A1S3BH58 (uncharacterized protein LOC103489786 OS=Cucumis melo OX=3656 GN=LOC103489786 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 167/239 (69.87%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFF QSPRFFSTE+EQPPPESSPNRF DK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GMNLAP----TSSQHLDDVLM---SCVISWERFRFEVRKIGRCLTEYAKIGCAHFASRIM 120
           G         + S    DVL+    C +S +  +FE  +               F   +M
Sbjct: 61  GFMYGKLFGFSRSTLKTDVLILLEGCNLSLDDIKFEYSR-------------NFFPVSMM 120

Query: 121 IQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLER 180
           IQFPS+QAYQ+AFQAIARKG+L R+ERADRSQWELLSPYNGKTV L+GIPRNALVED+ER
Sbjct: 121 IQFPSQQAYQHAFQAIARKGFLHRLERADRSQWELLSPYNGKTVFLQGIPRNALVEDVER 180

Query: 181 FLSGCDYDGSSINFYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 233
           FLSGCDYD SSIN YRGSFS PTK ATV F SP+QAMHAFLTKNRGFCLNNQISM+VLQ
Sbjct: 181 FLSGCDYDASSINIYRGSFSEPTKMATVQFLSPIQAMHAFLTKNRGFCLNNQISMQVLQ 226

[Close]

BLAST of Chy8G154050 vs. ExPASy TrEMBL
Match: A0A5A7TVY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001380 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.8e-72
Identity = 151/215 (70.23%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFF QSPRFFSTE+EQPPPESSPNRF DK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GMNLAPTSSQHLDDVLMSCVISWERFR-------FEVRKIGRCLTEYAKI-------GC- 120
           GMNLAPTSSQHLDDVL SCVISWERFR       F   K+        K        GC 
Sbjct: 61  GMNLAPTSSQHLDDVLFSCVISWERFRVYRWWRGFMYGKLFGFSRSTLKTDVLILLEGCN 120

Query: 121 ------------AHFASRIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYN 180
                         F   +MIQFPS+QAYQ+AFQAIARKG+L R+ERADRSQWELLSPYN
Sbjct: 121 LSLDDIKFEYSRNFFPVSMMIQFPSQQAYQHAFQAIARKGFLHRLERADRSQWELLSPYN 180

Query: 181 GKTVLLEGIPRNALVEDLERFLSGCDYDGSSINFY 189
           GKTV L+GIPRNALVED+ERFLSGCDYD SSIN Y
Sbjct: 181 GKTVFLQGIPRNALVEDVERFLSGCDYDASSINIY 215

[Close]

BLAST of Chy8G154050 vs. ExPASy TrEMBL
Match: A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.8e-64
Identity = 137/240 (57.08%), Postives = 165/240 (68.75%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MS L LLRKALGS+F++ SA ANH LP+FF QSPRFFSTE EQPP E   + F D + T 
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GMNLAP-------TSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFASRIM 120
           G+           T    + ++L  C ++ +  + E  +             +   + +M
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNR-------------SFTPTSMM 120

Query: 121 IQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLER 180
           +QFPS QAY NAF+ I RKG L R+ERADRSQW++LSPYNGKTVLL+GIPRNALVED+ER
Sbjct: 121 MQFPSRQAYDNAFRVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVER 180

Query: 181 FLSGCDYDGSSIN-FYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 233
           FL GCDYD +SIN F+R SF  P + ATVLF SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 FLLGCDYDATSINMFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Chy8G154050 vs. ExPASy TrEMBL
Match: A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.4e-63
Identity = 136/243 (55.97%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           M+NL+LLRKALGS+F SRSAT NH LP+FF QS RFFSTE EQ PPESS N F D + T 
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GM----------NLAPTSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFAS 120
           G+          N+  T    + ++L  C +S +  + E  +             +   +
Sbjct: 61  GLVYGKLYGITRNVLKTD---IVNLLEGCNLSLDDVKVEYNR-------------SFTPT 120

Query: 121 RIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVED 180
            +M+QFPS +AY NAF+ I R+G + R+ERADRSQW+LLSPYNGK +LL+GIPRNA ++D
Sbjct: 121 SMMMQFPSWKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDD 180

Query: 181 LERFLSGCDYDGSSIN-FYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMR 233
           +ERFLSGCDYD +SIN F+R S   P + ATVLF SP QAMHAFLTKNRGFCLNNQI MR
Sbjct: 181 VERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMR 227

[Close]

BLAST of Chy8G154050 vs. NCBI nr
Match: XP_004142097.1 (uncharacterized protein LOC101220680 isoform X1 [Cucumis sativus] >KGN54201.1 hypothetical protein Csa_018042 [Cucumis sativus])

HSP 1 Score: 343 bits (880), Expect = 4.37e-117
Identity = 187/240 (77.92%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNLSLLRKALGSNFISRSATANHELPLFF QSPRFFSTEQEQ PPESSPNRF DKTNTD
Sbjct: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60

Query: 61  GMN----LAPTSSQHLDDVLM---SCVISWERFRFE-VRKIGRCLTEYAKIGCAHFASRI 120
           G+     +  + S    DVL+    C +S+E  +FE VR                  + I
Sbjct: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNF--------------VPTSI 120

Query: 121 MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE 180
           MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE
Sbjct: 121 MIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLE 180

Query: 181 RFLSGCDYDGSSINFYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 232
           RFLSGCDYD SSINFYRGSFSAPTKTATV FRSP+QAMHAFLTKNRGFCLNNQISMRVLQ
Sbjct: 181 RFLSGCDYDASSINFYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 226

[Close]

BLAST of Chy8G154050 vs. NCBI nr
Match: XP_008447318.1 (PREDICTED: uncharacterized protein LOC103489786 [Cucumis melo])

HSP 1 Score: 312 bits (799), Expect = 9.31e-105
Identity = 167/239 (69.87%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFF QSPRFFSTE+EQPPPESSPNRF DK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GMNLAP----TSSQHLDDVLM---SCVISWERFRFEVRKIGRCLTEYAKIGCAHFASRIM 120
           G         + S    DVL+    C +S +  +FE  +               F   +M
Sbjct: 61  GFMYGKLFGFSRSTLKTDVLILLEGCNLSLDDIKFEYSR-------------NFFPVSMM 120

Query: 121 IQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLER 180
           IQFPS+QAYQ+AFQAIARKG+L R+ERADRSQWELLSPYNGKTV L+GIPRNALVED+ER
Sbjct: 121 IQFPSQQAYQHAFQAIARKGFLHRLERADRSQWELLSPYNGKTVFLQGIPRNALVEDVER 180

Query: 181 FLSGCDYDGSSINFYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 232
           FLSGCDYD SSIN YRGSFS PTK ATV F SP+QAMHAFLTKNRGFCLNNQISM+VLQ
Sbjct: 181 FLSGCDYDASSINIYRGSFSEPTKMATVQFLSPIQAMHAFLTKNRGFCLNNQISMQVLQ 226

[Close]

BLAST of Chy8G154050 vs. NCBI nr
Match: KAA0047320.1 (uncharacterized protein E6C27_scaffold908G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (713), Expect = 1.48e-90
Identity = 151/215 (70.23%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFF QSPRFFSTE+EQPPPESSPNRF DK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GMNLAPTSSQHLDDVLMSCVISWERFR-------FEVRKIGRCLTEYAKI-------GCA 120
           GMNLAPTSSQHLDDVL SCVISWERFR       F   K+        K        GC 
Sbjct: 61  GMNLAPTSSQHLDDVLFSCVISWERFRVYRWWRGFMYGKLFGFSRSTLKTDVLILLEGCN 120

Query: 121 -------------HFASRIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYN 180
                         F   +MIQFPS+QAYQ+AFQAIARKG+L R+ERADRSQWELLSPYN
Sbjct: 121 LSLDDIKFEYSRNFFPVSMMIQFPSQQAYQHAFQAIARKGFLHRLERADRSQWELLSPYN 180

Query: 181 GKTVLLEGIPRNALVEDLERFLSGCDYDGSSINFY 188
           GKTV L+GIPRNALVED+ERFLSGCDYD SSIN Y
Sbjct: 181 GKTVFLQGIPRNALVEDVERFLSGCDYDASSINIY 215

[Close]

BLAST of Chy8G154050 vs. NCBI nr
Match: XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249 bits (637), Expect = 4.03e-80
Identity = 138/243 (56.79%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           M+NL+LLRKALGS+FISRSAT NH LP+FF QS RFFSTE EQ PPESS + F D +   
Sbjct: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60

Query: 61  GM----------NLAPTSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFAS 120
           G+          N+  T   +L   L  C +S +  + E  +             +   +
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNL---LEGCNLSLDDVKVEYNR-------------SFTPT 120

Query: 121 RIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVED 180
            +M+QFPS +AY NAF+ I R+G + R+ERADRSQW+LLSPYNGKTVLL+GIPRNA ++D
Sbjct: 121 SMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDD 180

Query: 181 LERFLSGCDYDGSSIN-FYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMR 232
           +ERFLSGCDYD +SIN F+R S   P + ATVLF SP QAMHAFLTKNRGFCLNNQI MR
Sbjct: 181 VERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMR 227

[Close]

BLAST of Chy8G154050 vs. NCBI nr
Match: XP_022972751.1 (uncharacterized protein LOC111471264 [Cucurbita maxima])

HSP 1 Score: 249 bits (637), Expect = 4.03e-80
Identity = 137/240 (57.08%), Postives = 165/240 (68.75%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFCQSPRFFSTEQEQPPPESSPNRFFDKTNTD 60
           MS L LLRKALGS+F++ SA ANH LP+FF QSPRFFSTE EQPP E   + F D + T 
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GMNLAP-------TSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFASRIM 120
           G+           T    + ++L  C ++ +  + E  +             +   + +M
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNR-------------SFTPTSMM 120

Query: 121 IQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLER 180
           +QFPS QAY NAF+ I RKG L R+ERADRSQW++LSPYNGKTVLL+GIPRNALVED+ER
Sbjct: 121 MQFPSRQAYDNAFRVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVER 180

Query: 181 FLSGCDYDGSSIN-FYRGSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMRVLQ 232
           FL GCDYD +SIN F+R SF  P + ATVLF SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 FLLGCDYDATSINMFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of Chy8G154050 vs. TAIR 10
Match: AT5G02740.1 (Ribosomal protein S24e family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 89/243 (36.63%), Postives = 127/243 (52.26%), Query Frame = 0


Query: 4   LSLLRKALGSNFISRS---ATANHELPLFFCQSPRFFSTEQEQPPPES--------SP-- 63
           +S+ R A+ S+   R      +   LP F  +  +  ST  EQPPP S        SP  
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  NRFFDKTNTDGMNLAPTSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFAS 123
            RF+ K +    +   T    + +VL  C ++ +  +F   + G  LT  A         
Sbjct: 61  GRFYGKFSGFSKHALKTD---IMNVLEGCSLTSDDLKFNYPRGGN-LTPAA--------- 120

Query: 124 RIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVED 183
            + +QFPS  AY  A + IA+KG L R+E+A R+QW+ + PY GK V L GIP NA+ +D
Sbjct: 121 -VFVQFPSLSAYDKALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDD 180

Query: 184 LERFLSGCDYDGSSINFYR-GSFSAPTKTATVLFRSPVQAMHAFLTKNRGFCLNNQISMR 233
           ++RFLSGC Y   SI F          + A V F S  QAM+A++TKNR F LN +I+++
Sbjct: 181 IDRFLSGCLYYPGSIQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQ 228

[Close]

BLAST of Chy8G154050 vs. TAIR 10
Match: AT5G02740.2 (Ribosomal protein S24e family protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-20
Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 4   LSLLRKALGSNFISRS---ATANHELPLFFCQSPRFFSTEQEQPPPES--------SP-- 63
           +S+ R A+ S+   R      +   LP F  +  +  ST  EQPPP S        SP  
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  NRFFDKTNTDGMNLAPTSSQHLDDVLMSCVISWERFRFEVRKIGRCLTEYAKIGCAHFAS 123
            RF+ K +    +   T    + +VL  C ++ +  +F   + G  LT  A         
Sbjct: 61  GRFYGKFSGFSKHALKTD---IMNVLEGCSLTSDDLKFNYPRGGN-LTPAA--------- 120

Query: 124 RIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVED 183
            + +QFPS  AY  A + IA+KG L R+E+A R+QW+ + PY GK V L GIP NA+ +D
Sbjct: 121 -VFVQFPSLSAYDKALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDD 180

Query: 184 LERFLSGCDYDGSSINF 188
           ++RFLSGC Y   SI F
Sbjct: 181 IDRFLSGCLYYPGSIQF 182

The following BLAST results are available for this feature:

BLAST of Chy8G154050 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G154050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L225	5.9e-92	77.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293110 PE=4 SV=1	[more]
A0A1S3BH58	1.1e-82	69.87	uncharacterized protein LOC103489786 OS=Cucumis melo OX=3656 GN=LOC103489786 PE=...	[more]
A0A5A7TVY8	1.8e-72	70.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1I6U3	6.8e-64	57.08	uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264...	[more]
A0A6J1GDZ1	4.4e-63	55.97	uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]

BLAST of Chy8G154050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142097.1	4.37e-117	77.92	uncharacterized protein LOC101220680 isoform X1 [Cucumis sativus] >KGN54201.1 hy...	[more]
XP_008447318.1	9.31e-105	69.87	PREDICTED: uncharacterized protein LOC103489786 [Cucumis melo]	[more]
KAA0047320.1	1.48e-90	70.23	uncharacterized protein E6C27_scaffold908G001380 [Cucumis melo var. makuwa]	[more]
XP_023544682.1	4.03e-80	56.79	uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]	[more]
XP_022972751.1	4.03e-80	57.08	uncharacterized protein LOC111471264 [Cucurbita maxima]	[more]

BLAST of Chy8G154050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02740.1	1.4e-29	36.63	Ribosomal protein S24e family protein	[more]
AT5G02740.2	3.5e-20	35.53	Ribosomal protein S24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 155..231 e-value: 6.5E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..60
None	No IPR available	PANTHER	PTHR48167	EXPRESSED PROTEIN	coord: 7..232
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 150..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G154050.1	Chy8G154050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding