Chy8G153910 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G153910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein SLOW GREEN 1, chloroplastic-like
Location	chrH08: 15503933 .. 15504970 (+)
RNA-Seq Expression	Chy8G153910
Synteny	Chy8G153910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCTCTTCCCACACTTCACCACCGTAGTTATCCTTCTCACCAACTCCTTTCCTTCACCCACCGTTTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGGTCTCTGCCGCCGTCTCACCTCCGTTCGTCTGTCAGGTCGTTGCGTGTTAAAGCCTCGTCCTCTTCACCGACCTCCGACGATACCTCCCCTCTTAATGTCGGCCTTCTGTCGGGATTTCTCAAAACCGCTTGTATTTCTGCTGCCGTTGCTGCATTCTTCTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCCGATGATTCGAATGATGTCGAAGCCCTTCGATCTCTCGTTGAGGAGAATGTGAAATCAGGTAAACTTCCAGATGCAATTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACCCTGAGTTGCCACTGTTAAAGGCTAATTTCTATAGCTATATGGGGGAGCTCGAATTGGCGAAAAATGAGTTTGAGGATATTTTAGCGAGAGACCCGTTTCTCGTTGAGGCTTATCATGGACTTGCAACGGTGGCGGATCAATTGAATGATAATTCATTGAAGGACGTTGCTAAAAGGATCGAAGAAGCAATGAAGAGGTGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGAGGCATTGAAAGCTTATAAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAATACTTTGAGAAATTTAGGAGGCTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGAAAACATGTTTGCAACAAAGCTCATTGCTCAGAAACTAGAAAAGGAGGGAACTGGTTCGAAGAGATGA

mRNA sequence

ATGGACTCTCTTCCCACACTTCACCACCGTAGTTATCCTTCTCACCAACTCCTTTCCTTCACCCACCGTTTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGGTCTCTGCCGCCGTCTCACCTCCGTTCGTCTGTCAGGTCGTTGCGTGTTAAAGCCTCGTCCTCTTCACCGACCTCCGACGATACCTCCCCTCTTAATGTCGGCCTTCTGTCGGGATTTCTCAAAACCGCTTGTATTTCTGCTGCCGTTGCTGCATTCTTCTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCCGATGATTCGAATGATGTCGAAGCCCTTCGATCTCTCGTTGAGGAGAATGTGAAATCAGGTAAACTTCCAGATGCAATTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACCCTGAGTTGCCACTGTTAAAGGCTAATTTCTATAGCTATATGGGGGAGCTCGAATTGGCGAAAAATGAGTTTGAGGATATTTTAGCGAGAGACCCGTTTCTCGTTGAGGCTTATCATGGACTTGCAACGGTGGCGGATCAATTGAATGATAATTCATTGAAGGACGTTGCTAAAAGGATCGAAGAAGCAATGAAGAGGTGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGAGGCATTGAAAGCTTATAAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAATACTTTGAGAAATTTAGGAGGCTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGAAAACATGTTTGCAACAAAGCTCATTGCTCAGAAACTAGAAAAGGAGGGAACTGGTTCGAAGAGATGA

Coding sequence (CDS)

ATGGACTCTCTTCCCACACTTCACCACCGTAGTTATCCTTCTCACCAACTCCTTTCCTTCACCCACCGTTTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGGTCTCTGCCGCCGTCTCACCTCCGTTCGTCTGTCAGGTCGTTGCGTGTTAAAGCCTCGTCCTCTTCACCGACCTCCGACGATACCTCCCCTCTTAATGTCGGCCTTCTGTCGGGATTTCTCAAAACCGCTTGTATTTCTGCTGCCGTTGCTGCATTCTTCTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCCGATGATTCGAATGATGTCGAAGCCCTTCGATCTCTCGTTGAGGAGAATGTGAAATCAGGTAAACTTCCAGATGCAATTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACCCTGAGTTGCCACTGTTAAAGGCTAATTTCTATAGCTATATGGGGGAGCTCGAATTGGCGAAAAATGAGTTTGAGGATATTTTAGCGAGAGACCCGTTTCTCGTTGAGGCTTATCATGGACTTGCAACGGTGGCGGATCAATTGAATGATAATTCATTGAAGGACGTTGCTAAAAGGATCGAAGAAGCAATGAAGAGGTGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGAGGCATTGAAAGCTTATAAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAATACTTTGAGAAATTTAGGAGGCTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGAAAACATGTTTGCAACAAAGCTCATTGCTCAGAAACTAGAAAAGGAGGGAACTGGTTCGAAGAGATGA

Protein sequence

MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSPTSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR*

Homology

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BLAST of Chy8G153910 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.6e-28
Identity = 91/289 (31.49%), Postives = 152/289 (52.60%), Query Frame = 0


Query: 45  RSSVRSLRVKASSSSPTSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAV 104
           R  + S+R++ASS+  +S    P        F K+A +  A  +           + V  
Sbjct: 30  RRDLLSIRIRASSNQNSSGYCFPEK---FKSFAKSAILIGAAVSM----TGKFSTLPVKA 89

Query: 105 QVAPETTESTDESTEYEENESVVEEKRADDSND--VEALRSLVEENVKSGKLPDAIEALN 164
           +    T E T E  + E+   +       DS    VE LRSL+++ ++ G+  +A++ L 
Sbjct: 90  ESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLE 149

Query: 165 RLIELEPNDPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDN 224
           RL+  +P + E   L A     MG  E A+  FE+IL R+P   EA    A + D+  + 
Sbjct: 150 RLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEG 209

Query: 225 SLKDVAKRIEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDF 284
           +   V +R+E+A+   + +    + RD +L++AQI  ++ +  EALK+Y++L +E+P+DF
Sbjct: 210 NA--VLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDF 269

Query: 285 RPYLCQGIIYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKL 332
           RPY C+G+IY+LL K+ EA++ F K+R L PK    + YL   +   KL
Sbjct: 270 RPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKL 309

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BLAST of Chy8G153910 vs. ExPASy TrEMBL
Match: A0A0A0KXE2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293280 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.4e-176
Identity = 331/345 (95.94%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPTLHHRSYPSHQLLSFTHRF S SKPISSLSFRSLPPS LRSSVRSLRVKASSSS 
Sbjct: 1   MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEY 120
           TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRAVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKAN 180
           EENESVVEEKRADDSNDVEALRSLVEENVKSGKLP+AIEALNRLIELEPNDPELPLLKAN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPNDPELPLLKAN 180

Query: 181 FYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKN 240
           FYSYMGELELAKNEFEDILARDPF+VEAYHGLATVA+QLNDNSLKDVAKRIEEAMK+CKN
Sbjct: 181 FYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKDVAKRIEEAMKKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSY EALKAYKELVREEPRDFRPYLCQGIIYTLL KSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYLCQGIIYTLLSKSEE 300

Query: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR 346
           AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKE  GSKR
Sbjct: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERAGSKR 345

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BLAST of Chy8G153910 vs. ExPASy TrEMBL
Match: A0A5A7TWQ7 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001590 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.9e-161
Identity = 302/345 (87.54%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLP+LHHR + SHQLLSF+HR SSFSKPISSLSFRS PPS LRSSVRSLRVKASSSS 
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEY 120
           TSDDT+  N GLLSGFLKTACIS AVAAFFF RFD+RR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKAN 180
           EENESVVEEKRADDSNDVEALRSLVEE+VKSGKLP+A+EALNRLIELEPND ELP+L+AN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKN 240
           F+SYMGELELAKNEFE+ILA+DP  VEAYHGLA VA+QLNDNSLKDV KRIEEAM++CKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYL+ALKAY+ELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR 346
           AEK+FEKFRRLVPKNHPYKEYLD+NM+ATK  AQK+EKEG GSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

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BLAST of Chy8G153910 vs. ExPASy TrEMBL
Match: A0A1S3BI52 (protein SLOW GREEN 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489908 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.9e-161
Identity = 302/345 (87.54%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLP+LHHR + SHQLLSF+HR SSFSKPISSLSFRS PPS LRSSVRSLRVKASSSS 
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEY 120
           TSDDT+  N GLLSGFLKTACIS AVAAFFF RFD+RR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKAN 180
           EENESVVEEKRADDSNDVEALRSLVEE+VKSGKLP+A+EALNRLIELEPND ELP+L+AN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKN 240
           F+SYMGELELAKNEFE+ILA+DP  VEAYHGLA VA+QLNDNSLKDV KRIEEAM++CKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYL+ALKAY+ELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR 346
           AEK+FEKFRRLVPKNHPYKEYLD+NM+ATK  AQK+EKEG GSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

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BLAST of Chy8G153910 vs. ExPASy TrEMBL
Match: A0A6J1IQW2 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477618 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.4e-136
Identity = 269/354 (75.99%), Postives = 294/354 (83.05%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPT+HHR +PS QLLSF+HR  SF KPISSLSF   PP+ LRSS RSL VKASSS  
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDDTS---------PLNVGLLSGFLKTACIS-AAVAAFFFLRFDHRRVVAVAVQVAPET 120
           TSD+ S           N GLLSGFLKTACIS AA AAF+FLRFDHRRVVAVAV VAP T
Sbjct: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPN 180
           TESTDEST +EENESVVEEK  DD    E LRSLVEENVKSGKLP+AIE L+RLIE+EPN
Sbjct: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180

Query: 181 DPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKR 240
           D ELPLL+AN  SY G+LELAKNEFE+IL  DPF VEAYHGL  V++QLNDNSLKDV KR
Sbjct: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGI 300
           IEEAM++CK Q DKS IRDFKLL+AQIKVM+GSY +ALKAY ELVREEP+DFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300

Query: 301 IYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSK 345
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY DENMFATKL AQKLEKE  G K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

[Close]

BLAST of Chy8G153910 vs. ExPASy TrEMBL
Match: A0A6J1GF65 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453392 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 5.8e-136
Identity = 269/354 (75.99%), Postives = 295/354 (83.33%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPT+HHR +PS QLLSF+HR  SF KPISSLSF   PP+ LRSS RSL VKASSS  
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDDTS---------PLNVGLLSGFLKTACIS-AAVAAFFFLRFDHRRVVAVAVQVAPET 120
           TSD+ S           N GLLSGFLKTACIS AA AAF+FLRFDHRRVVAVAV VA ET
Sbjct: 61  TSDEPSRNAKSSISETRNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVASET 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPN 180
           TESTDEST +EENESVVEEK  DDS+  E LRSLVEENVK GKLP+AIE L+RLIELEPN
Sbjct: 121 TESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKLGKLPEAIETLSRLIELEPN 180

Query: 181 DPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKR 240
           D ELPLL+AN  SY G+LELA+NEFE+IL  DPF VEAYHGL  V++QLNDNSLKDV KR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGI 300
           IEEA+++CK Q DKS IRDFKLL+AQIKVM+GSY +ALKAY ELVREEP+DFRPYLCQGI
Sbjct: 241 IEEAVEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSK 345
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY DENMFATKL AQKLEKE  G K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

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BLAST of Chy8G153910 vs. NCBI nr
Match: XP_011653615.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN54218.1 hypothetical protein Csa_018088 [Cucumis sativus])

HSP 1 Score: 628 bits (1619), Expect = 7.84e-226
Identity = 331/345 (95.94%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPTLHHRSYPSHQLLSFTHRF S SKPISSLSFRSLPPS LRSSVRSLRVKASSSS 
Sbjct: 1   MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEY 120
           TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRAVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKAN 180
           EENESVVEEKRADDSNDVEALRSLVEENVKSGKLP+AIEALNRLIELEPNDPELPLLKAN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPNDPELPLLKAN 180

Query: 181 FYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKN 240
           FYSYMGELELAKNEFEDILARDPF+VEAYHGLATVA+QLNDNSLKDVAKRIEEAMK+CKN
Sbjct: 181 FYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKDVAKRIEEAMKKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSY EALKAYKELVREEPRDFRPYLCQGIIYTLL KSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYLCQGIIYTLLSKSEE 300

Query: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR 345
           AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKE  GSKR
Sbjct: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERAGSKR 345

[Close]

BLAST of Chy8G153910 vs. NCBI nr
Match: XP_008447473.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic-like [Cucumis melo] >KAA0047338.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 577 bits (1486), Expect = 1.43e-205
Identity = 302/345 (87.54%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLP+LHHR + SHQLLSF+HR SSFSKPISSLSFRS PPS LRSSVRSLRVKASSSS 
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTEY 120
           TSDDT+  N GLLSGFLKTACIS AVAAFFF RFD+RR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKAN 180
           EENESVVEEKRADDSNDVEALRSLVEE+VKSGKLP+A+EALNRLIELEPND ELP+L+AN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKN 240
           F+SYMGELELAKNEFE+ILA+DP  VEAYHGLA VA+QLNDNSLKDV KRIEEAM++CKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYL+ALKAY+ELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSKR 345
           AEK+FEKFRRLVPKNHPYKEYLD+NM+ATK  AQK+EKEG GSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

[Close]

BLAST of Chy8G153910 vs. NCBI nr
Match: XP_038883735.1 (protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 550 bits (1416), Expect = 9.11e-195
Identity = 295/353 (83.57%), Postives = 310/353 (87.82%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPTLHHR +PSHQLLS +HR  SFSKPISSLSFRS PPS LRSS RSL VKASSSS 
Sbjct: 1   MESLPTLHHRRHPSHQLLSSSHRLPSFSKPISSLSFRSPPPSPLRSSFRSLSVKASSSSS 60

Query: 61  TSDDT---------SPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETT 120
           TSD+T            N GLLSGFLKTACIS A AAFFFLRFDHRR VAVAV VAPETT
Sbjct: 61  TSDETLRNDKSSISETTNCGLLSGFLKTACISVAAAAFFFLRFDHRRAVAVAVPVAPETT 120

Query: 121 ESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPND 180
           ESTDEST YEENESVVEEK  DD NDVEALRSLVEE VKSGKLP+A+EALNRLIELEPND
Sbjct: 121 ESTDESTAYEENESVVEEKPTDDLNDVEALRSLVEEKVKSGKLPEAVEALNRLIELEPND 180

Query: 181 PELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRI 240
            ELPLL+ANF+SYMGELELAKNEFE+ILA DPF VEAYHGLA VA+QLNDNSLKDVAKRI
Sbjct: 181 LELPLLRANFHSYMGELELAKNEFEEILAEDPFRVEAYHGLAMVAEQLNDNSLKDVAKRI 240

Query: 241 EEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGII 300
           EEAM++CK Q DKSDIRDFKLLVAQIKVMEGSY +ALKAY+ELVREEPRDFRPYLCQGII
Sbjct: 241 EEAMEKCKKQNDKSDIRDFKLLVAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQGII 300

Query: 301 YTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSK 344
           YTLLRK+EEAEK FEKFRRLVPKNHPYKEY DENMFATKL AQKLEKEG G K
Sbjct: 301 YTLLRKNEEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEGAGLK 353

[Close]

BLAST of Chy8G153910 vs. NCBI nr
Match: XP_023545038.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499 bits (1286), Expect = 5.77e-175
Identity = 271/354 (76.55%), Postives = 296/354 (83.62%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPT+HHR +PS QLLSF+HR  SF KPISSLSF   PP+ LRSS RSL VKASSS  
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDDTS---------PLNVGLLSGFLKTACIS-AAVAAFFFLRFDHRRVVAVAVQVAPET 120
           TSD+ S           N GLLSGFLKTACIS AA AAF+FLRFDHRRVVAVAV VAPET
Sbjct: 61  TSDEPSRNSKSSISETTNSGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPET 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPN 180
            ESTDEST +EENESVVEEK  DDS+  E LRSLVEENVKSGKLP+AIE L+RLIELEPN
Sbjct: 121 MESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKSGKLPEAIETLSRLIELEPN 180

Query: 181 DPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKR 240
           D ELPLL+AN  SY G+LELA+NEFE+IL  DPF VEAYHGL  V++QLNDNSLKDV KR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGI 300
           IEEAM++CK Q DKS IRDFKLL+AQIKVM+GSY +ALKAY ELVREEP+DFRPYLCQGI
Sbjct: 241 IEEAMEKCKKQNDKSIIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSK 344
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY DENMFATKL AQKLEKE  G K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

[Close]

BLAST of Chy8G153910 vs. NCBI nr
Match: XP_022977249.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 495 bits (1274), Expect = 3.86e-173
Identity = 269/354 (75.99%), Postives = 294/354 (83.05%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SLPT+HHR +PS QLLSF+HR  SF KPISSLSF   PP+ LRSS RSL VKASSS  
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDDTS---------PLNVGLLSGFLKTACIS-AAVAAFFFLRFDHRRVVAVAVQVAPET 120
           TSD+ S           N GLLSGFLKTACIS AA AAF+FLRFDHRRVVAVAV VAP T
Sbjct: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPN 180
           TESTDEST +EENESVVEEK  DD    E LRSLVEENVKSGKLP+AIE L+RLIE+EPN
Sbjct: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180

Query: 181 DPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKR 240
           D ELPLL+AN  SY G+LELAKNEFE+IL  DPF VEAYHGL  V++QLNDNSLKDV KR
Sbjct: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGI 300
           IEEAM++CK Q DKS IRDFKLL+AQIKVM+GSY +ALKAY ELVREEP+DFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300

Query: 301 IYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKEGTGSK 344
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY DENMFATKL AQKLEKE  G K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

[Close]

BLAST of Chy8G153910 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.6 bits (771), Expect = 8.1e-82
Identity = 182/344 (52.91%), Postives = 230/344 (66.86%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M+SL  L     P+H  LSFTH  SSF K  SS S RSLP S   SS + + +KASSS  
Sbjct: 1   MESLGKLQLHQQPNH--LSFTHFSSSFPKKPSSFSLRSLPRS--TSSFKCISIKASSSKS 60

Query: 61  TSDDTSPLNVGLLSGFLKTACIS-AAVAAFFFLRFDHRRVVAVAVQVAP----ETTESTD 120
                S          LK+ C+S  A AA F +    +   A+A  VA     E+ + ++
Sbjct: 61  QDSKLS---------ILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQSN 120

Query: 121 ESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELP 180
            +  +EE E  +EE  A   +DVEALRSL+E  +KS KL +AIE ++RLIELEP + E P
Sbjct: 121 GNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWP 180

Query: 181 LLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAM 240
           +LKAN +SY G+LE AK  FE+IL +DP  VEAYHGL        D+ L  V KRIEEAM
Sbjct: 181 MLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDD-LNAVEKRIEEAM 240

Query: 241 KRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLL 300
            RCK +K++ D+RDFKLLVAQI+V+EG + EALK Y+ELV+EEPRDFRPYLCQGIIYT+L
Sbjct: 241 VRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVL 300

Query: 301 RKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKE 340
           +K  EAEK FEKFRRLVPKNHPY+EY  +NM A+KL A+K+++E
Sbjct: 301 KKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQRE 330

[Close]

BLAST of Chy8G153910 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 5.6e-75
Identity = 164/340 (48.24%), Postives = 223/340 (65.59%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSS-FSKPISSLSFRSLPPSHLRSSVRSLRVKASSSS 60
           M+SL  L     P H  LSFTH  SS F K +   S + +      SS++S  +KASSS 
Sbjct: 1   MESLGKLQLHHQPFH--LSFTHTSSSTFPKNLFKSSIQPI------SSLKSASIKASSSK 60

Query: 61  PTSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRVVAVAVQVAPETTESTDESTE 120
              +  +PL         K+ CI+   AA   L   H +  A+A  +AP  +  + E+  
Sbjct: 61  -FQNSITPLPKSTPFRLFKSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVT 120

Query: 121 YEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKA 180
            EE E  ++E      +DV+ALRSL+E  +KS KL +A+E ++RLI+LEP + E P+LKA
Sbjct: 121 LEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKA 180

Query: 181 NFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCK 240
           N ++Y G+L+LAK  FE+ILA+DP  VEAYHGL           LK+V  RIEEAM +CK
Sbjct: 181 NIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAG-LDLKEVESRIEEAMLKCK 240

Query: 241 NQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSE 300
            + +++D RDFKLLVAQI+V+EG + EALK Y+ELV+EEPRDFRPYLCQGIIYTLL+K +
Sbjct: 241 KENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKD 300

Query: 301 EAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKE 340
           +AE+ F+ FR+LVPKNHPY+EY  +NM ATKL ++K ++E
Sbjct: 301 KAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQRE 330

[Close]

BLAST of Chy8G153910 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-57
Identity = 142/346 (41.04%), Postives = 207/346 (59.83%), Query Frame = 0


Query: 1   MDSLPTLHHRSYPSHQLLSFTHRFSSFSKPISSLSFRSLPPSHLRSSVRSLRVKASSSSP 60
           M SL   H+     H  L  THR     KP+S       PPS      R +R  + SS+P
Sbjct: 1   MVSLAKFHYCDQTLHLRLD-THR-KPQPKPVSYRILHKPPPS------RVIRASSFSSNP 60

Query: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDH--RRVVAVAVQVAPE--------- 120
                          FLKT C++   AA       H   + V  A  V+P          
Sbjct: 61  K------------PSFLKTTCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPSTAADL 120

Query: 121 TTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEP 180
           T++      + EE E+ +E+    + NDVEAL+SL++   ++  +  A+E LNRLIE++P
Sbjct: 121 TSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQP 180

Query: 181 NDPELPLLKANFYSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAK 240
            + E  +LKA   +Y G+ + A   FE++L++DPF VEAYHGL  +A   +++ L ++  
Sbjct: 181 EEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGL-VMAYSESESKLSEIES 240

Query: 241 RIEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQG 300
           RI EA+++CK +++K D RDF LL+AQI+V++G+ +EAL+ Y+ELV++EP+DFRPYLCQG
Sbjct: 241 RINEAIEKCK-KENKKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQG 300

Query: 301 IIYTLLRKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFAT-KLIAQ 335
           +IYTL++K +EAEK F +FRRLVP+NHPYKEYLD N+  T KL A+
Sbjct: 301 LIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAK 324

[Close]

BLAST of Chy8G153910 vs. TAIR 10
Match: AT3G09490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 115/297 (38.72%), Postives = 161/297 (54.21%), Query Frame = 0


Query: 29  KPISSLSFRSLPPSHLRSS-VRSLRVKASSSSPTSDDTSPLNVGLLSGFLKTACISAAVA 88
           K  S LSF  L     +S+ +R   ++ASSSS  S+    L        LKT  IS   A
Sbjct: 24  KSPSKLSFPLLFRDQAKSTPIRFPVIRASSSSSASNHKPSL--------LKTTFISLTAA 83

Query: 89  AFFF---LRFDHRRVVAVAVQVAPETTESTDESTEYEENESVVEEKRADDSNDVEALRSL 148
           A  F     F ++R     V V                 E+ +E+     SNDV AL  L
Sbjct: 84  AALFSASFYFVNKRAAMTPVAVV----------------ETTLEKHLETQSNDVNALSLL 143

Query: 149 VEENVKSGKLPDAIEALNRLIELEPNDPELPLLKANFYSYMGELELAKNEFEDILARDPF 208
            E   KS K   AI  L+RLIE+EP + + P +KA   SY G+ E A   FE+IL +DP 
Sbjct: 144 TEIKFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEAFEEILEKDPI 203

Query: 209 LVEAYHGLATVADQLNDN-SLKDVAKRIEEAMKRCKNQKDKSDIRDFKLLVAQIKVMEGS 268
            V+AYH L  V +  N    L ++ KRI + ++RCK +K   +I  F++L+AQI+ +EG 
Sbjct: 204 RVDAYHYL--VMEYYNSKPKLTEIEKRINKVIRRCKKEKKTKEILGFRMLIAQIRFIEGK 263

Query: 269 YLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEEAEKYFEKFRRLVPKNHPYKE 321
            +EA++  +ELV+E+P DF  YL QG++YTL+ K EEA K FE   R++P+NHP +E
Sbjct: 264 SVEAIRICEELVKEDPNDFTIYLFQGVVYTLMNKGEEAAKQFEHVARVIPRNHPSRE 294

[Close]

BLAST of Chy8G153910 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-36
Identity = 79/209 (37.80%), Postives = 135/209 (64.59%), Query Frame = 0


Query: 122 ENESVVEEKRADDSNDVEALRSLVEENVKSGKLPDAIEALNRLIELEPNDPELPLLKANF 181
           E+E + E+   ++  ++EA++++V + ++ GK  DA++ + +L++LEP++ E  LL+A  
Sbjct: 117 EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALC 176

Query: 182 YSYMGELELAKNEFEDILARDPFLVEAYHGLATVADQLNDNSLKDVAKRIEEAMKRCKNQ 241
           Y  MGEL  AK  ++DIL   P L+ A HGLA V  + +D S+ D+   + EAM+  +  
Sbjct: 177 YETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHDTSVFDM---LIEAMEVARQG 236

Query: 242 KDKSDIRDFKLLVAQIKVMEGSYLEALKAYKELVREEPRDFRPYLCQGIIYTLLRKSEEA 301
              ++ R+ ++L+ Q+ ++EG + E LK ++++V + PRDFRPYLCQGI+Y+L+ K EEA
Sbjct: 237 NRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 296

Query: 302 EKYFEKFRRLVPKNHPYKEYLDENMFATK 331
            + FE +  LVP   P K +LD+   A +
Sbjct: 297 AQQFEIYWSLVPGEFPQKGFLDDVALAAQ 322

The following BLAST results are available for this feature:

BLAST of Chy8G153910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	8.6e-28	31.49	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of Chy8G153910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXE2	3.4e-176	95.94	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293280 ...	[more]
A0A5A7TWQ7	8.9e-161	87.54	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908...	[more]
A0A1S3BI52	8.9e-161	87.54	protein SLOW GREEN 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489908...	[more]
A0A6J1IQW2	3.4e-136	75.99	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1GF65	5.8e-136	75.99	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Chy8G153910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653615.1	7.84e-226	95.94	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN54218.1 hypothetical p...	[more]
XP_008447473.1	1.43e-205	87.54	PREDICTED: protein SLOW GREEN 1, chloroplastic-like [Cucumis melo] >KAA0047338.1...	[more]
XP_038883735.1	9.11e-195	83.57	protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida]	[more]
XP_023545038.1	5.77e-175	76.55	protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977249.1	3.86e-173	75.99	protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Chy8G153910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37400.1	8.1e-82	52.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	5.6e-75	48.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	1.1e-57	41.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09490.1	1.7e-39	38.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	3.0e-36	37.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..248
None	No IPR available	PFAM	PF14559	TPR_19	coord: 150..212 e-value: 9.5E-7 score: 29.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..133
None	No IPR available	PANTHER	PTHR26312:SF146	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..338
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..338
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 138..171 e-value: 12.0 score: 14.3 coord: 172..205 e-value: 160.0 score: 4.4 coord: 248..281 e-value: 330.0 score: 1.7 coord: 282..315 e-value: 0.88 score: 18.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 138..171 score: 8.9389
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 282..315 score: 8.1719
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 102..248 e-value: 1.3E-14 score: 56.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 249..335 e-value: 4.1E-8 score: 34.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 136..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G153910.1	Chy8G153910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding