Chy8G152560 (gene) Cucumber (hystrix) v1

Overview
NameChy8G152560
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH08: 14404935 .. 14408765 (+)
RNA-Seq ExpressionChy8G152560
SyntenyChy8G152560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGAACTCAACGTAATATTTATAAGAACCATGAAATTACATTAACACAATTACGCAACATCAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGATAGAAATTCAAACAGCAGAAGAAGAATTAGAAGAATTGAAGAACTGAATACAATCTTTGACAGCTTCAGCTCGGTGAGATTCTTCCATGGAATCAGAAACCGAATGCGATCTGTTGAACTTGGAAGAACCATTATTTTTCAAAGACGAAGAATTACTAGAAGAAGTTGATCTCTTTCTCAACGAAACATAGCGTAGAACTTTAGCCATTTTAGCTCCGAGCCGCCGGAGGAACTTTTCCGGGGAGAATCTGGGGGATTTGGGGAGCCGAAAAACCCAAAAGACGATGATCGGCCTTTTCCTATTTCTTGACTTGGCCGGCGCCGCTTGATCTGAGCTGAAACTCACTCTTCTGCCTGAGCTTAATTTTGTTGACATTTCTTTTTCCTTTTTTGGGGAATTTGTTTTGATATTTGAAGAGAGAGAGAGGGAAGGAAAAGAAAAGGAAAAGGAAAAGAAAAAGAAAAAGAGTAATTTAGGAGTGAGTGAAAAACAAAAACAAAAAGAAAAAAGATATATAATGTATAGTTTTTATTTTTATTATTTTTATTTTGAAAGGTGCCTTTAAGTTAGCTAGCTGTCTCTGACCAAGATCTCATTCATTTATTTATTTTACAAATATATATACATATATATAAATTTATGGCCTTTTGGTATCTTATATTACATTCAAATTATTGTTCTTATACATCTATGGATCAAATGATATTATTGAATTTTCTTTGTTTGATCATTGGTATTATAATTTTATTTTTTATTATATTTATACTAAACGGCTTTTAAGTGAATAAAATTTTAATATATTTGTAATTTTTTATTATAAGAGTGTGTGAGTCATTAACTTGAATTTTGTGTATAGTATATTTCATGTTTTGTTCTCTAATTATAATTGTTGGTATTTATCAATTATTATAACATACAATTAATTACAATATTACTATTTTAATTTGTTTTTTTTTTTTTTACGATTTGTTAGGTTATTTACTATTTTCTACTCATGGTCTCATTTTTCTTTTTATTACAACTTTTATTATTTTCTACCAAAATAAAAATAGTTAGCATCCAAACATAGTTTATTATAACTAACTCTATTTATTGCTTCATAGTCTTTGTTTTTTTTTTAAAAAAATTGTTAAAATATTAATCCGAAACAATTTAATCTATAATTTTGAGCATTAATATTTAAGTTGTTGTTAGAATGTTTTTTTTTTTCTTCTCTTTTTATTATTAAATGACACAAGAAAAGTTTAAACAACATTTCCCCCCAAAAGTTTTTAGATTCTAAATTTGGTGTAAAACACACACACATATATATATGAGGAATGTGAACTACTAAGACATTTTGCTTTAATTTTTATATTTTATATTTTATATTTTGAAAAAATATATGAATTACTAAAGATTCACATGTAACTCATATTTCAAAGTTAAATAACAATGTAACCTTTTCTAGATCTTTATATGTTTTAAATTAAATTATTTTAAATAATTTATTAAAGACTGTTTTTAAATATAGTAGAATGAATCAAAATATTTATAAAGTATAACAAAATATTACCATCTATCTACGATTGACTGTAATAGATGACTATATATATCTATTTGTATCATGATAATACAAATAATAATCTATCTTGGTTTATGACTTACGTATTAAAAAGTTTTATCATTTAAAATATTTTTTTTATTTTTCTTTTCATTAATTATCGTTGTCATTAAAAAAAAAATCTATCGTTCGAATGGATTTTAAATATTCCAATTTCCTTAGTGTTTTTTTTTCTTATAAATTTTTCTAAAAAGATTTGATGGTCTAAAATCATTTGAAAGGTTTAAACATATTTTGTTCATAGAAAAATTTCTTATATTTTAGAAAACTTACTTTTGAAAAAATTAAACTTATTCCAAATGCCCTTTTAACTTAAGTAAAACAATAGTGAGTTAGTTTGATTATGTGATAAAATCTAAAAATGCGGTAATTATGTAGAGTTTAAAATTTTGAATTGTGTACATGATTTACCGTTAACGATTTTCCAATCCTACTTTTGTCACTATTTTCCTTTCATACTATCTTTATCGTTGCTCATTAAAATAACATAATTTTTAGAAATTCGAGGAATGAAAGATGTATATTTATTTTCCAATCTCTAAAGTTAAATTGAAGAAAAATAAGATCATCCTAATTAAAATATATTGAATATTTTTCCTTAATTATCAAGGTTAAGTACAATACTATAACACAATAGTTAAGGCATAAAAAAAATTCTATAGATCGATGGTTTGAATTCTCTCGTTTCATAGTTAGTATACAATTTAATTTAAAAGAAAATGAAAGATAATAAAATTGAGGGCCAGCTCTATCTCTCTCTAACTAGGTGAGACAGTAAATTTTACCATCCCTACATGTCTCTATATATTTATTAATTAGTCTTTTTTAATCTATTTATGGCTAGACAATAATAAATAATTTTGTTCAAAAAAATAGAAAAAAGAATAAAGAATGAGTAGGTAACCAATATCAAAATTGCTACCTCTCATTATTTTTCCTTTTTCATTCTTTAAATAACACTTGAGAATTGAGAGTCAATTTTTTATTTAAAAATGAATTTCTTTTAAAAATAGCAAAACCCTATTTTGAAAACAATTTTGGTTTTGACTTTCTCCAAAAGTAAAAAAAAAACACACTAAAGTACTTAAGAAAATCATATATTTGTACTCAATGTTTCTTTTTATAATGATTAAAAATATTTACAATCTTAATTAAATCTTAAAATAAAGTGTTATTTTATTTATATGGTTTTCAAAATGAAACTAGAATTTCTCAAACATTATTAATGTAGATTATTAACCAGCGAGAAATAAAAAACAAATACTTATAAACGAGGAATTCAACCCATCATCTCACAATTGTGTAATAGTTAAATGATGAAGACTTGTTAGATATATAAATTAGAAGTTAAAAGTAACGTAATTAAATTATAAAAAAACTGAAGACACGTCAACGCTATATTGTAAGTTTAGACTCTAAACTTGTAATTTAACTAATTGATAATTCCTAATGACTAATGAATATAAATTTAGTGCAAAGAGAATTTTGAATAAACGAAGTGAGAAAAAATGCATAGATTTAGAGTGAGATTTTGAAGTATTTAGAAAGAGAGACAAAGGTACAAATTTAAGGTCAAAAGAGGGGAGATTTTTGATTTGTTGAACAACCCCAATAGAGGGAAAATAGATAAATTCTTTGAAAGGTAAAGGACCTATGAACTTTTTCGGGGAAGACCACCAAATAGAGTTAATAAATTTGGAGTTAATATATTGCAATTAGTAAGCTTGTGTTTAGAGTTGTAAAATAAAGCTATTTTATAATTGTCATAAGTAGATTAAAAGAAAAGAAAAAACACCTAAATTTAAGAAACTGATGAACCAAACTACTTCGATGTTTAAAGGGTACTGTCTAGCTCAATCTTCTCGGTTACTAGAGAAAAAGAAAAAGAAAAAAAAGGGTAAGAAAGACAATCTTCCTCACCACATTCATCATTTTTCAAGATTGCTATTGAAAATGTTCCAATTAAGAAAATAAAGTTTGTTTGGTGAATACCTAATGGTGGAAAAGGAGTAATGGAGTATGTCCCAATAACTTAATGGGCCTATTCTAGCATCTGATGGGCCTCCAATTTTGAGCCCATGAAATAGCATTTGGATTGTCATTAAAGAATGGGCCCTTTGTTGGCCTTTT

mRNA sequence

AGAAAGAACTCAACGTAATATTTATAAGAACCATGAAATTACATTAACACAATTACGCAACATCAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGATAGAAATTCAAACAGCAGAAGAAGAATTAGAAGAATTGAAGAACTGAATACAATCTTTGACAGCTTCAGCTCGGTGAGATTCTTCCATGGAATCAGAAACCGAATGCGATCTGTTGAACTTGGAAGAACCATTATTTTTCAAAGACGAAGAATTACTAGAAGAAGTTGATCTCTTTCTCAACGAAACATAGCGTAGAACTTTAGCCATTTTAGCTCCGAGCCGCCGGAGGAACTTTTCCGGGGAGAATCTGGGGGATTTGGGGAGCCGAAAAACCCAAAAGACGATGATCGGCCTTTTCCTATTTCTTGACTTGGCCGGCGCCGCTTGATCTGAGCTGAAACTCACTCTTCTGCCTGAGCTTAATTTTGTTGACATTTCTTTTTCCTTTTTTGGGGAATTTGTTTTGATATTTGAAGAGAGAGAGAGGGAAGGAAAAGAAAAGGAAAAGGAAAAGAAAAAGAAAAAGAGTAATTTAGGAGTGAGTGAAAAACAAAAACAAAAAGAAAAAAGATATATAATGTATAGTTTTTATTTTTATTATTTTTATTTTGAAAGGTGCCTTTAAGTTAGCTAGCTGTCTCTGACCAAGATCTCATTCATTTATTTATTTTACAAATATATATACACACACACATATATATATGAGGAATAATGGGCCCTTTGTTGGCCTTTT

Coding sequence (CDS)

AGAAAGAACTCAACGTAATATTTATAAGAACCATGAAATTACATTAACACAATTACGCAACATCAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGATAGAAATTCAAACAGCAGAAGAAGAATTAGAAGAATTGAAGAACTGAATACAATCTTTGACAGCTTCAGCTCGGTGAGATTCTTCCATGGAATCAGAAACCGAATGCGATCTGTTGAACTTGGAAGAACCATTATTTTTCAAAGACGAAGAATTACTAGAAGAAGTTGATCTCTTTCTCAACGAAACATAGCGTAGAACTTTAGCCATTTTAGCTCCGAGCCGCCGGAGGAACTTTTCCGGGGAGAATCTGGGGGATTTGGGGAGCCGAAAAACCCAAAAGACGATGATCGGCCTTTTCCTATTTCTTGACTTGGCCGGCGCCGCTTGATCTGAGCTGAAACTCACTCTTCTGCCTGAGCTTAATTTTGTTGACATTTCTTTTTCCTTTTTTGGGGAATTTGTTTTGATATTTGAAGAGAGAGAGAGGGAAGGAAAAGAAAAGGAAAAGGAAAAGAAAAAGAAAAAGAGTAATTTAGGAGTGAGTGAAAAACAAAAACAAAAAGAAAAAAGATATATAATGTATAGTTTTTATTTTTATTATTTTTATTTTGAAAGGTGCCTTTAAGTTAGCTAGCTGTCTCTGACCAAGATCTCATTCATTTATTTATTTTACAAATATATATACACACACACATATATATATGAGGAATAATGGGCCCTTTGTTGGCCTTTT

Protein sequence

RKNST*YL*EP*NYINTITQHQKKKERKKERKIEIQTAEEELEELKN*IQSLTASAR*DSSMESETECDLLNLEEPLFFKDEELLEEVDLFLNET*RRTLAILAPSRRRNFSGENLGDLGSRKTQKTMIGLFLFLDLAGAA*SELKLTLLPELNFVDISFSFFGEFVLIFEEREREGKEKEKEKKKKKSNLGVSEKQKQKEKRYIMYSFYFYYFYFERCL*VS*LSLTKISFIYLFYKYIYTHTYIYEE*WALCWPF
Homology
[Close]
BLAST of Chy8G152560 vs. ExPASy TrEMBL
Match: A0A0L9VFF0 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g244500 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.7e-04
Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 

Query: 49  IQSLTASAR*DSSMESETECDLLNLEEPLFFKDEELLEEVDLFLNET*RRTLAILAPSRR 108
           +QS TA AR D S+ S++E DL  ++E  F +        DL L ET     A  +PSR 
Sbjct: 1   MQSSTALARYDESLGSDSERDLTKVDEETFLE--------DLLLKETTLMEFATFSPSRS 60

Query: 109 RNFSGENLGDLGSRKTQKTMIGLFLFLD-------LAGAA*SELKLTLLPELNFV 157
           RN +G+N G L   +  +  + LFLF +       +  +  S LKLTLL  LN +
Sbjct: 61  RNLTGDNKGSLDILEKLQLPMTLFLFPNTLCLRNMVGFSLTSGLKLTLLLFLNIL 107

[Close]
BLAST of Chy8G152560 vs. ExPASy TrEMBL
Match: A0A0S3S2R9 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G041400 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.7e-04
Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 

Query: 49  IQSLTASAR*DSSMESETECDLLNLEEPLFFKDEELLEEVDLFLNET*RRTLAILAPSRR 108
           +QS TA AR D S+ S++E DL  ++E  F +        DL L ET     A  +PSR 
Sbjct: 1   MQSSTALARYDESLGSDSERDLTKVDEETFLE--------DLLLKETTLMEFATFSPSRS 60

Query: 109 RNFSGENLGDLGSRKTQKTMIGLFLFLD-------LAGAA*SELKLTLLPELNFV 157
           RN +G+N G L   +  +  + LFLF +       +  +  S LKLTLL  LN +
Sbjct: 61  RNLTGDNKGSLDILEKLQLPMTLFLFPNTLCLRNMVGFSLTSGLKLTLLLFLNIL 107

[Close]
BLAST of Chy8G152560 vs. NCBI nr
Match: KAG5104668.1 (hypothetical protein JHK82_041638 [Glycine max])

HSP 1 Score: 58.9 bits (141), Expect = 3.20e-07
Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 0 

Query: 49  IQSLTASAR*DSSMESETECDLLNLEEPLFFKDEELLEEVDLFLNET*RRTLAILAPSRR 108
           +QS TA AR D S+ S+ ECDL  ++E  F +D  LL  V   +       LA  APSR 
Sbjct: 1   MQSSTALARYDESLGSDNECDLTKVDEETFLED--LLPIVTTLME------LATFAPSRS 60

Query: 109 RNFSGENLGDLGSRKTQKTMIGLFLF------LDLAG-AA*SELKLTLLPELN 154
           RN +G+N G LG+ +  +  + LFLF       ++ G +  S LKLTLL  LN
Sbjct: 61  RNLTGDNKGSLGNLEKLQLPMTLFLFPNTPCLRNMVGFSLTSGLKLTLLLFLN 105

[Close]
BLAST of Chy8G152560 vs. NCBI nr
Match: KAG5113881.1 (hypothetical protein JHK82_037150 [Glycine max])

HSP 1 Score: 58.2 bits (139), Expect = 6.11e-07
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0 

Query: 49  IQSLTASAR*DSSMESETECDLLNLEEPLFFKDEELLEEVDLFLNET*RRTLAILAPSRR 108
           +QS TA AR D S+ S+ ECDL  ++E  F +D   L  +++ L E     LA  APSR 
Sbjct: 1   MQSSTALARYDESLGSDNECDLTKVDEETFLED---LLPIEITLME-----LATFAPSRS 60

Query: 109 RNFSGENLGDLGSRKTQKTMIGLFLFLD-------LAGAA*SELKLTLLPELN 154
            N +G+N G LG+ +  +  + LFLF +       +  +  S LKLTLL  LN
Sbjct: 61  MNLTGDNKGSLGNLEKLQLPMTLFLFPNTPFLRNMVVFSLTSGLKLTLLLFLN 105

The following BLAST results are available for this feature:
BLAST of Chy8G152560 vs.
Match NameE-valueIdentityDescription
BLAST of Chy8G152560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0L9VFF08.7e-0436.52Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g244500 PE... [more]
A0A0S3S2R98.7e-0436.52Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G... [more]
BLAST of Chy8G152560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5104668.13.20e-0740.71hypothetical protein JHK82_041638 [Glycine max][more]
KAG5113881.16.11e-0738.94hypothetical protein JHK82_037150 [Glycine max][more]
BLAST of Chy8G152560 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..45
NoneNo IPR availableCOILSCoilCoilcoord: 161..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G152560.1Chy8G152560.1mRNA